Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18955 Corylus avellana HOM05D002366 ORTHO05D002499 1.3e-100 369.8 187 100.0
Haze_18932 Corylus avellana HOM05D002366 ORTHO05D002499 9.8e-45 184.1 159 66.7
Cfa020652 Carpinus fangiana HOM05D002366 ORTHO05D002499 2.5e-40 169.5 162 66.0
Haze_18933 Corylus avellana HOM05D002366 ORTHO05D002499 8.3e-36 154.5 145 64.8
Cfa020651 Carpinus fangiana HOM05D002366 ORTHO05D002499 4.6e-34 148.7 156 60.3
Dinv15677 Davidia involucrata HOM05D002366 ORTHO05D002499 9.2e-27 124.4 157 51.0
Actinidia28014 Actinidia chinensis HOM05D002366 ORTHO05D002499 2.0e-26 123.2 155 49.0
MBI13_g21678_MAGBIO Magnolia biondii HOM05D002366 ORTHO05D002499 1.3e-25 120.6 186 43.5
Prupe.5G239200 Prunus persica HOM05D002366 ORTHO05D002499 1.6e-23 113.6 179 45.3
Atru.chr11.990 Acer truncatum HOM05D002366 ORTHO05D002499 6.8e-22 108.2 163 46.0
Atru.chr9.1589 Acer truncatum HOM05D002366 ORTHO05D002499 1.2e-21 107.5 176 43.2
TWI74G0850 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 5.8e-21 105.1 177 41.2
Oeu019149.1 Olea europaea HOM05D002366 ORTHO05D002499 4.9e-20 102.1 159 47.2
Migut.I00570 Erythranthe guttata HOM05D002366 ORTHO05D002499 6.4e-20 101.7 160 43.8
Potri.012G040100 Populus trichocarpa HOM05D002366 ORTHO05D002499 6.4e-20 101.7 183 40.4
TWI81G0381 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 8.3e-20 101.3 173 42.2
PGR083G2740 Punica granatum HOM05D002366 ORTHO05D002499 1.1e-19 100.9 163 45.4
Aqoxy3G04031 Aquilegia oxysepala HOM05D002366 ORTHO05D002499 2.4e-19 99.8 176 40.3
Lj2g0004495 Lotus japonicus HOM05D002366 ORTHO05D002499 1.6e-18 97.1 174 40.2
TPR.G28607 Trifolium pratense HOM05D002366 ORTHO05D002499 2.1e-18 96.7 174 42.0
Medtr6g073040 Medicago truncatula HOM05D002366 ORTHO05D002499 2.7e-18 96.3 170 41.2
Medtr6g073090 Medicago truncatula HOM05D002366 ORTHO05D002499 2.7e-18 96.3 170 41.2
Cc04_g09120 Coffea canephora HOM05D002366 ORTHO05D002499 6.0e-18 95.1 174 41.4
Glyma.07G107600 Glycine max HOM05D002366 ORTHO05D002499 6.0e-18 95.1 174 40.2
Manes.14G174100 Manihot esculenta HOM05D002366 ORTHO05D002499 6.0e-18 95.1 175 40.0
Glyma.09G170100 Glycine max HOM05D002366 ORTHO05D002499 7.8e-18 94.7 174 40.2
FAN13G0088 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.0e-17 94.4 168 41.1
MD14G1241700 Malus domestica HOM05D002366 ORTHO05D002499 1.0e-17 94.4 182 40.7
FvH4_5g17860 Fragaria vesca HOM05D002366 ORTHO05D002499 1.7e-17 93.6 178 39.3
FAN18G2907 Fragaria x ananassa HOM05D002366 ORTHO05D002499 1.7e-17 93.6 178 39.3
RcHm_v2.0_Chr7g0177731 Rosa chinensis HOM05D002366 ORTHO05D002499 2.3e-17 93.2 161 41.6
RcHm_v2.0_Chr7g0177721 Rosa chinensis HOM05D002366 ORTHO05D002499 5.1e-17 92.0 178 40.4
Ca_20288_v3 Cicer arietinum L. HOM05D000229 ORTHO05D000182 6.6e-17 91.7 117 52.1
Oeu042016.1 Olea europaea HOM05D002366 ORTHO05D002499 1.1e-16 90.9 151 41.1
Phvul.004G145800 Phaseolus vulgaris HOM05D002366 ORTHO05D002499 1.5e-16 90.5 169 40.2
Thecc.03G067200 Theobroma cacao HOM05D002366 ORTHO05D002499 1.5e-16 90.5 166 38.0
Peaxi162Scf00171g00733 Petunia axillaris HOM05D002366 ORTHO05D002499 2.5e-16 89.7 164 43.9
PGSC0003DMG400037321 Solanum tuberosum HOM05D002366 ORTHO05D002499 2.5e-16 89.7 157 45.9
FAN08G0111 Fragaria x ananassa HOM05D002366 ORTHO05D002499 3.3e-16 89.4 200 35.5
Psat1g123560 Pisum sativum HOM05D002366 ORTHO05D002499 5.6e-16 88.6 170 38.8
SalBow5G4446 Salvia bowleyana HOM05D002366 ORTHO05D002499 5.6e-16 88.6 153 41.2
Duzib205G0226 Durio zibethinus HOM05D002366 ORTHO05D002499 9.5e-16 87.8 166 38.6
FAN13G1140 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.8e-15 86.3 188 36.7
Solyc03g098090.2 Solanum lycopersicum HOM05D002366 ORTHO05D002499 4.7e-15 85.5 165 43.6
Sopen03g028790 Solanum pennellii HOM05D002366 ORTHO05D002499 6.2e-15 85.1 165 43.6
Duzib084G1428 Durio zibethinus HOM05D002366 ORTHO05D002499 1.1e-14 84.3 176 36.9
DCAR_010198 Daucus carota HOM05D002366 ORTHO05D002499 1.8e-14 83.6 160 38.8
FAN18G0936 Fragaria x ananassa HOM05D002366 ORTHO05D002499 2.3e-14 83.2 188 36.2
Nitab4.5_0004454g0030 Nicotiana tabacum HOM05D002366 ORTHO05D002499 3.1e-14 82.8 172 41.3
TWI60G0723 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 4.0e-14 82.4 167 38.9
Peaxi162Scf00171g00734 Petunia axillaris HOM05D002366 ORTHO05D002499 6.8e-14 81.6 177 37.9
Glyma.16G219700 Glycine max HOM05D002366 ORTHO05D002499 8.9e-14 81.3 171 38.6
Nitab4.5_0025009g0010 Nicotiana tabacum HOM05D002366 ORTHO05D002499 8.9e-14 81.3 172 41.3
FvH4_5g17870 Fragaria vesca HOM05D002366 ORTHO05D002499 1.2e-13 80.9 188 35.6
DCAR_010197 Daucus carota HOM05D002366 ORTHO05D002499 2.6e-13 79.7 159 36.5
Thecc.09G204000 Theobroma cacao HOM05D002366 ORTHO05D002499 2.6e-13 79.7 154 40.3
VMungo0464G1622 Vigna mungo HOM05D002366 ORTHO05D002499 2.6e-13 79.7 132 40.2
CANSAT01G2159 Cannabis sativa HOM05D002366 ORTHO05D002499 4.4e-13 79.0 182 37.4
Sopen03g031880 Solanum pennellii HOM05D002366 ORTHO05D002499 1.7e-12 77.0 115 44.3
VMungo0464G0502 Vigna mungo HOM05D002366 ORTHO05D002499 1.7e-12 77.0 164 37.8
COL.COLO4_32729 Corchorus olitorius HOM05D002366 ORTHO05D002499 2.9e-12 76.3 163 38.0
Phvul.004G145701 Phaseolus vulgaris HOM05D002366 ORTHO05D002499 2.9e-12 76.3 160 38.8
Gorai.005G134800 Gossypium raimondii HOM05D002366 ORTHO05D002499 3.7e-12 75.9 167 36.5
Peaxi162Scf00358g00614 Petunia axillaris HOM05D002366 ORTHO05D002499 3.7e-12 75.9 161 38.5
Sed0024270 Sechium edule HOM05D002366 ORTHO05D002499 3.7e-12 75.9 172 34.9
ECA232G1962 Erigeron canadensis HOM05D000340 ORTHO05D000821 6.4e-12 75.1 121 43.8
ATR0598G065 Amborella trichopoda HOM05D002366 ORTHO05D002499 1.4e-11 73.9 103 43.7
Sed0019419 Sechium edule HOM05D002366 ORTHO05D002499 4.1e-11 72.4 161 35.4
MELO3C001930.2 Cucumis melo HOM05D002366 ORTHO05D002499 5.4e-11 72.0 171 34.5
Gohir.A03G090932 Gossypium hirsutum HOM05D002366 ORTHO05D002499 5.4e-11 72.0 167 35.3
GSVIVG01016541001 Vitis vinifera HOM05D002366 ORTHO05D002499 5.4e-11 72.0 153 34.6
MSTRG.8245 Avicennia marina HOM05D002366 ORTHO05D002499 1.6e-10 70.5 140 39.3
ClCG04G012730 Citrullus lanatus HOM05D002366 ORTHO05D002499 3.5e-10 69.3 173 34.1
Cc02_g07950 Coffea canephora HOM05D002366 ORTHO05D002499 3.5e-10 69.3 156 33.3
Gohir.D02G119100 Gossypium hirsutum HOM05D002366 ORTHO05D002499 3.5e-10 69.3 168 36.3
PGSC0003DMG400027047 Solanum tuberosum HOM05D002366 ORTHO05D002499 3.5e-10 69.3 165 35.2
Thecc.10G043700 Theobroma cacao HOM05D002366 ORTHO05D002499 6.0e-10 68.6 153 36.6
CSS0010618 Camellia sinensis var. sinensis HOM05D002366 ORTHO05D002499 1.0e-09 67.8 150 34.0
Lsat_1_v5_gn_7_29321 Lactuca sativa HOM05D002366 ORTHO05D002499 1.0e-09 67.8 119 41.2
TAR629G0597 Trochodendron aralioides HOM05D002366 ORTHO05D002499 1.0e-09 67.8 103 48.5
Dinv26005 Davidia involucrata HOM05D002366 ORTHO05D002499 1.3e-09 67.4 148 35.1
CANSAT56G2475 Cannabis sativa HOM05D002366 ORTHO05D002499 1.7e-09 67.0 154 35.7
DCAR_027633 Daucus carota HOM05D002366 ORTHO05D002499 2.3e-09 66.6 151 34.4
Sabra10G0158200 Salix brachista HOM05D002366 ORTHO05D002499 2.3e-09 66.6 147 34.7
Solyc06g072350.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 3.0e-09 66.2 163 34.4
GSVIVG01016540001 Vitis vinifera HOM05D002366 ORTHO05D002499 3.0e-09 66.2 148 35.8
CsaV3_1G004870 Cucumis sativus L. HOM05D002366 ORTHO05D002499 3.9e-09 65.9 175 33.1
CANSAT56G4267 Cannabis sativa HOM05D002366 ORTHO05D002499 6.6e-09 65.1 154 35.1
BcaB06g29094 Brassica carinata HOM05D002366 ORTHO05D002499 8.6e-09 64.7 150 33.3
Sabra10G0158300 Salix brachista HOM05D002366 ORTHO05D002499 8.6e-09 64.7 148 33.8
Solyc04g011480.3 Solanum lycopersicum HOM05D002366 ORTHO05D002499 8.6e-09 64.7 149 36.9
CDE07G1817 Ceratophyllum demersum HOM05D002366 ORTHO05D002499 1.1e-08 64.3 148 34.5
Oeu048250.1 Olea europaea HOM05D002366 ORTHO05D002499 1.5e-08 63.9 149 32.9
VMungo0464G0902 Vigna mungo HOM05D002366 ORTHO05D002499 1.9e-08 63.5 164 32.3
Potri.010G204700 Populus trichocarpa HOM05D002366 ORTHO05D002499 4.3e-08 62.4 148 35.8
Lalb_Chr10g0091701 Lupinus albus HOM05D002366 ORTHO05D002499 5.6e-08 62.0 156 34.0
AT2G39518 Arabidopsis thaliana HOM05D002366 ORTHO05D002499 7.3e-08 61.6 156 32.7
Carub.0004s2160 Capsella rubella HOM05D002366 ORTHO05D002499 7.3e-08 61.6 149 33.6
Sed0005662 Sechium edule HOM05D002366 ORTHO05D002499 7.3e-08 61.6 168 33.9
PGSC0003DMG400027749 Solanum tuberosum HOM05D002366 ORTHO05D002499 7.3e-08 61.6 149 35.6
Sopen04g005660 Solanum pennellii HOM05D002366 ORTHO05D002499 9.6e-08 61.2 149 35.6
TWI38G1308 Tripterygium wilfordii HOM05D002366 ORTHO05D002499 9.6e-08 61.2 116 37.1
AL4G36940 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 1.2e-07 60.8 152 32.2
TPR.G15520 Trifolium pratense HOM05D002366 ORTHO05D002499 1.2e-07 60.8 151 34.4
CsaV3_5G026550 Cucumis sativus L. HOM05D002366 ORTHO05D002499 1.6e-07 60.5 155 32.3
Dinv31454 Davidia involucrata HOM05D002366 ORTHO05D002499 1.6e-07 60.5 119 36.1
Duzib114G1053 Durio zibethinus HOM05D002366 ORTHO05D002499 1.6e-07 60.5 154 35.7
Nitab4.5_0000021g0380 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.6e-07 60.5 95 48.4
Nitab4.5_0000687g0160 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.6e-07 60.5 152 36.2
Nitab4.5_0001243g0010 Nicotiana tabacum HOM05D002366 ORTHO05D002499 1.6e-07 60.5 185 35.7
BcaB02g09112 Brassica carinata HOM05D002366 ORTHO05D002499 2.1e-07 60.1 150 32.7
Prupe.2G233700 Prunus persica HOM05D002366 ORTHO05D002499 2.1e-07 60.1 147 34.7
SalBow6G5537 Salvia bowleyana HOM05D002366 ORTHO05D002499 2.1e-07 60.1 150 34.7
Sp4g21820 Schrenkiella parvula HOM05D002366 ORTHO05D002499 2.1e-07 60.1 155 30.3
Sopen06g028720 Solanum pennellii HOM05D002366 ORTHO05D002499 2.1e-07 60.1 179 31.3
MELO3C033579.2 Cucumis melo HOM05D002366 ORTHO05D002499 2.8e-07 59.7 159 30.8
MELO3C021643.2 Cucumis melo HOM05D002366 ORTHO05D002499 3.6e-07 59.3 149 34.2
AL4G36950 Arabidopsis lyrata HOM05D002366 ORTHO05D002499 4.7e-07 58.9 156 31.4
BolC4t28238H Brassica oleracea HOM05D002366 ORTHO05D002499 4.7e-07 58.9 150 32.0
CAN.G786.13 Capsicum annuum HOM05D002366 ORTHO05D002499 6.2e-07 58.5 150 34.0
CARHR134410 Cardamine hirsuta HOM05D002366 ORTHO05D002499 6.2e-07 58.5 157 31.2
THA.LOC104810173 Tarenaya hassleriana HOM05D002366 ORTHO05D002499 6.2e-07 58.5 155 34.2
BcaC02g12081 Brassica carinata HOM05D002366 ORTHO05D002499 8.1e-07 58.2 150 32.0
C04p08120 Brassica napus HOM05D002366 ORTHO05D002499 8.1e-07 58.2 150 32.0
BolC4t22422H Brassica oleracea HOM05D002366 ORTHO05D002499 8.1e-07 58.2 150 32.0
Gohir.A10G217500 Gossypium hirsutum HOM05D002366 ORTHO05D002499 8.1e-07 58.2 156 33.3
arahy.Tifrunner.gnm1.ann1.BG6DLE Arachis hypogaea HOM05D002366 ORTHO05D002499 1.1e-06 57.8 147 30.6
arahy.Tifrunner.gnm1.ann1.CW7JQJ Arachis hypogaea HOM05D002366 ORTHO05D002499 1.1e-06 57.8 147 30.6
A04p30420 Brassica napus HOM05D002366 ORTHO05D002499 1.1e-06 57.8 150 31.3
C04p67400 Brassica napus HOM05D002366 ORTHO05D002499 1.1e-06 57.8 150 31.3
BraA04t18467Z Brassica rapa HOM05D002366 ORTHO05D002499 1.1e-06 57.8 150 31.3
DCAR_023535 Daucus carota HOM05D002366 ORTHO05D002499 1.1e-06 57.8 162 30.9
Thhalv10017310m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 1.1e-06 57.8 151 33.8
Prupe.2G233900 Prunus persica HOM05D002366 ORTHO05D002499 1.1e-06 57.8 153 32.0
Thhalv10017305m.g Eutrema salsugineum HOM05D002366 ORTHO05D002499 1.4e-06 57.4 156 32.7
Gorai.011G257400 Gossypium raimondii HOM05D002366 ORTHO05D002499 1.8e-06 57.0 156 32.7
Sopen04g005650 Solanum pennellii HOM05D002366 ORTHO05D002499 2.4e-06 56.6 164 29.3
BcaB06g29095 Brassica carinata HOM05D002366 ORTHO05D002499 3.1e-06 56.2 157 31.8
CsaV3_5G026560 Cucumis sativus L. HOM05D002366 ORTHO05D002499 3.1e-06 56.2 156 31.4
Peaxi162Scf00760g00218 Petunia axillaris HOM05D002366 ORTHO05D002499 3.1e-06 56.2 149 33.6
Solyc04g011467.1 Solanum lycopersicum HOM05D002366 ORTHO05D002499 3.1e-06 56.2 164 29.3
C04p67410 Brassica napus HOM05D002366 ORTHO05D002499 4.0e-06 55.8 155 32.9
BolC4t28239H Brassica oleracea HOM05D002366 ORTHO05D002499 4.0e-06 55.8 155 32.9
FAN03G1080 Fragaria x ananassa HOM05D002366 ORTHO05D002499 4.0e-06 55.8 150 32.0
Medtr7g024750 Medicago truncatula HOM05D002366 ORTHO05D002499 4.0e-06 55.8 145 31.7
Sp4g21830 Schrenkiella parvula HOM05D002366 ORTHO05D002499 4.0e-06 55.8 156 31.4
BcaC02g07396 Brassica carinata HOM05D002366 ORTHO05D002499 5.2e-06 55.5 141 30.5
BcaC02g07399 Brassica carinata HOM05D002366 ORTHO05D002499 6.8e-06 55.1 157 31.2
Ca_07285_v3 Cicer arietinum L. HOM05D002366 ORTHO05D002499 6.8e-06 55.1 146 30.8
RcHm_v2.0_Chr1g0366551 Rosa chinensis HOM05D002366 ORTHO05D002499 6.8e-06 55.1 150 33.3
BcaC02g07395 Brassica carinata HOM05D002366 ORTHO05D002499 8.9e-06 54.7 155 32.3
Haze_17057 Corylus avellana HOM05D002366 ORTHO05D002499 8.9e-06 54.7 148 32.4
FvH4_7g22200 Fragaria vesca HOM05D002366 ORTHO05D002499 8.9e-06 54.7 150 31.3
FAN06G1701 Fragaria x ananassa HOM05D002366 ORTHO05D002499 8.9e-06 54.7 150 31.3
Zm00001eb113850 Zea mays HOM05D025436 ORTHO05D002499 8.9e-06 54.7 174 30.5


User provided reference genes

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