Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 6.9e-66 253.8 129 100.0
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 2.9e-32 142.1 86 87.2
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 4.9e-27 124.8 86 77.9
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.5e-23 113.2 86 68.6
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 3.3e-23 112.1 86 68.6
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 3.3e-23 112.1 86 68.6
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.3e-23 111.7 86 67.4
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 4.3e-23 111.7 85 70.6
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 7.3e-23 110.9 86 67.4
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.3e-23 110.9 86 67.4
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.2e-22 110.2 86 67.4
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.6e-22 109.8 86 66.3
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 3.6e-22 108.6 86 68.6
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 8.0e-22 107.5 86 66.3
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.4e-21 106.7 86 65.1
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 1.4e-21 106.7 86 65.1
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 6.8e-21 104.4 85 64.7
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 8.9e-21 104.0 86 62.8
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 8.9e-21 104.0 76 65.8
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 5.7e-20 101.3 86 64.0
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 7.5e-20 100.9 85 62.4
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 9.8e-20 100.5 86 61.6
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 1.3e-19 100.1 85 62.4
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.3e-19 100.1 86 61.6
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 1.3e-19 100.1 86 59.3
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 1.7e-19 99.8 86 61.6
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 2.9e-19 99.0 86 61.6
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 3.7e-19 98.6 75 65.3
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 3.7e-19 98.6 86 61.6
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 8.3e-19 97.4 86 60.5
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 8.3e-19 97.4 86 59.3
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 8.3e-19 97.4 86 60.5
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 2.4e-18 95.9 73 63.0
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 3.2e-18 95.5 86 60.5
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 4.1e-18 95.1 86 59.3
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 4.1e-18 95.1 86 55.8
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 5.4e-18 94.7 86 60.5
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 7.0e-18 94.4 81 61.7
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 7.0e-18 94.4 77 63.6
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 7.0e-18 94.4 85 56.5
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 7.0e-18 94.4 85 56.5
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.2e-17 93.6 86 55.8
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.2e-17 93.6 79 60.8
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 1.6e-17 93.2 86 55.8
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 2.0e-17 92.8 96 52.1
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 2.0e-17 92.8 86 55.8
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.5e-17 92.0 72 59.7
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 3.5e-17 92.0 86 58.1
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 4.6e-17 91.7 79 55.7
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 5.9e-17 91.3 86 57.0
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 7.8e-17 90.9 76 59.2
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 7.8e-17 90.9 85 57.6
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 1.3e-16 90.1 86 54.7
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.3e-16 90.1 86 57.0
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 1.3e-16 90.1 86 59.3
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.7e-16 89.7 85 55.3
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 2.3e-16 89.4 86 53.5
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 3.0e-16 89.0 86 53.5
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 3.9e-16 88.6 77 59.7
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 5.0e-16 88.2 85 54.1
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 8.6e-16 87.4 86 57.0
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.1e-15 87.0 73 60.3
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 1.1e-15 87.0 86 57.0
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.9e-15 86.3 86 53.5
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.9e-15 86.3 76 53.9
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 2.5e-15 85.9 88 55.7
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 5.6e-15 84.7 86 52.3
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 7.3e-15 84.3 85 56.5
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.6e-14 83.2 81 53.1
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 2.8e-14 82.4 86 51.2
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 2.8e-14 82.4 81 49.4
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.6e-14 82.0 81 51.9
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.8e-13 79.7 74 55.4
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 3.1e-13 79.0 85 50.6
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 8.9e-13 77.4 89 50.6
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.2e-12 77.0 72 50.0
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.5e-12 76.6 88 47.7
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 2.0e-12 76.3 72 54.2
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 7.5e-12 74.3 86 51.2
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.3e-11 73.6 81 45.7
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 1.7e-11 73.2 87 50.6
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 6.4e-11 71.2 86 48.8
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 8.3e-11 70.9 89 48.3
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 8.3e-11 70.9 80 50.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 1.1e-10 70.5 82 48.8
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 1.1e-10 70.5 82 48.8
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.1e-10 70.5 78 50.0
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 1.1e-10 70.5 78 50.0
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.4e-10 70.1 86 47.7
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.9e-10 69.7 89 47.2
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 4.1e-10 68.6 89 46.1
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 5.4e-10 68.2 86 46.5
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 5.4e-10 68.2 89 46.1
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 7.0e-10 67.8 86 46.5
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 9.2e-10 67.4 89 46.1
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.2e-09 67.0 76 44.7
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 1.2e-09 67.0 78 48.7
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 3.5e-09 65.5 86 45.3
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 4.6e-09 65.1 86 45.3
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 4.6e-09 65.1 75 50.7
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 7.8e-09 64.3 79 48.1
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 1.0e-08 63.9 59 55.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.0e-08 63.9 108 38.0
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.7e-08 63.2 73 46.6
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 3.0e-08 62.4 86 45.3
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 3.0e-08 62.4 69 44.9
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.6e-08 60.8 88 40.9
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.6e-08 60.8 88 40.9
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.6e-08 60.8 88 40.9
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 8.6e-08 60.8 88 40.9
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 1.1e-07 60.5 79 44.3
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 1.5e-07 60.1 79 46.8
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.5e-07 60.1 75 45.3
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 1.9e-07 59.7 85 44.7
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 1.9e-07 59.7 85 44.7
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.9e-07 59.7 55 49.1
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 2.5e-07 59.3 85 43.5
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 2.5e-07 59.3 79 43.0
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 2.5e-07 59.3 69 44.9
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 3.3e-07 58.9 71 45.1
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 3.3e-07 58.9 75 42.7
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 3.3e-07 58.9 65 50.8
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 5.6e-07 58.2 64 45.3
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 9.5e-07 57.4 69 43.5
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.2e-06 57.0 86 41.9
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.2e-06 57.0 66 43.9
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 1.6e-06 56.6 86 41.9
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 8.1e-06 54.3 86 40.7
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 8.1e-06 54.3 86 40.7
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 8.1e-06 54.3 86 40.7


User provided reference genes

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