Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 6.0e-152 540.8 274 100.0
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 6.6e-82 308.1 332 55.1
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.5e-78 294.7 332 52.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 7.5e-78 294.7 331 52.9
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 4.1e-76 288.9 359 49.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 4.6e-75 285.4 332 50.9
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 6.0e-75 285.0 332 50.0
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.7e-74 283.5 331 49.2
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 3.0e-74 282.7 333 49.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.9e-73 280.0 332 50.9
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.9e-73 280.0 332 51.2
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 4.3e-73 278.9 332 51.2
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 9.5e-73 277.7 316 52.5
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.1e-72 276.6 332 49.7
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 4.7e-72 275.4 332 49.1
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 4.7e-72 275.4 321 52.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.1e-71 274.2 338 47.6
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.1e-71 274.2 353 47.3
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.5e-70 270.4 332 49.7
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.0e-70 270.0 332 48.2
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 4.4e-70 268.9 282 52.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 4.4e-70 268.9 283 53.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 4.4e-70 268.9 284 53.9
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 5.8e-70 268.5 283 52.7
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.3e-69 267.3 334 49.1
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.2e-69 266.5 283 52.7
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 2.2e-69 266.5 332 48.8
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 3.7e-69 265.8 337 48.7
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.1e-68 264.2 330 49.1
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.1e-68 264.2 284 53.2
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.9e-68 263.5 330 48.8
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.2e-68 262.7 321 48.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.2e-68 262.7 335 49.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 4.1e-68 262.3 321 48.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 4.1e-68 262.3 282 52.5
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 5.4e-68 261.9 284 51.4
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.1e-68 261.5 320 47.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 9.2e-68 261.2 337 46.6
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.6e-67 260.4 320 47.8
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.7e-67 259.6 284 53.2
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.9e-66 255.8 330 47.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.5e-65 253.8 332 46.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.3e-65 252.7 330 45.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 7.3e-65 251.5 283 50.9
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 9.5e-65 251.1 333 45.0
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.2e-64 250.8 283 50.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.8e-64 249.6 336 44.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 2.8e-64 249.6 332 45.5
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 4.7e-64 248.8 301 49.8
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 4.7e-64 248.8 283 51.2
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 6.2e-64 248.4 330 47.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 8.1e-64 248.1 284 49.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.1e-63 247.7 332 46.1
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.4e-63 247.3 253 55.3
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.4e-63 247.3 306 47.1
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.4e-63 247.3 306 47.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.4e-63 246.5 283 49.8
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 4.0e-63 245.7 306 47.1
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.0e-63 245.7 331 45.6
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 5.2e-63 245.4 284 49.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 6.8e-63 245.0 283 48.8
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.2e-62 244.2 339 43.4
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.5e-62 243.8 332 44.6
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.4e-62 242.7 331 45.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 4.4e-62 242.3 318 46.9
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 7.6e-62 241.5 306 46.1
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 7.6e-62 241.5 307 46.6
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 9.9e-62 241.1 332 44.6
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.1e-60 237.7 284 48.9
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 1.9e-60 236.9 318 46.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.4e-60 235.3 273 50.5
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.4e-60 235.3 273 50.5
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.6e-59 233.8 265 52.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 4.6e-59 232.3 318 44.0
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.0e-58 231.1 319 46.1
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 2.3e-58 229.9 245 52.7
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-57 227.6 219 57.1
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.1e-57 227.6 317 43.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.5e-57 227.3 331 43.8
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 2.5e-57 226.5 332 44.3
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 9.6e-57 224.6 195 62.1
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.2e-56 224.2 323 42.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.1e-55 221.1 307 45.0
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.4e-55 219.9 332 41.6
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 5.2e-55 218.8 328 42.1
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.9e-55 218.4 254 50.4
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.7e-53 213.8 254 46.9
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.9e-53 213.0 324 43.2
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.2e-51 207.6 218 52.8
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.2e-51 207.6 246 48.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 3.5e-51 206.1 317 41.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 3.9e-50 202.6 187 61.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.4e-47 194.1 194 53.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.8e-47 193.7 227 47.1
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.3e-45 187.6 193 52.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.7e-45 187.2 181 55.8
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.1e-44 181.8 329 39.8
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.1e-33 147.9 329 31.9
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-33 147.9 115 66.1
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.8e-32 143.3 232 36.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 4.5e-30 136.0 160 53.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 4.6e-27 125.9 243 34.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.9e-25 120.6 241 33.6
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.3e-25 119.8 225 34.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 9.0e-23 111.7 330 29.1
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 5.0e-21 105.9 220 32.3
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 5.1e-18 95.9 214 32.7
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.1e-17 94.7 88 55.7
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.7e-17 92.4 227 31.3
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.7e-16 90.9 112 47.3
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.7e-06 55.5 55 50.9
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 7.7e-06 55.5 43 53.5


User provided reference genes

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