Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18853 Corylus avellana HOM05D042226 ORTHO05D000074 1.0e-159 566.6 273 100.0
Haze_18851 Corylus avellana HOM05D042226 ORTHO05D000074 1.2e-144 516.5 252 98.0
Haze_18850 Corylus avellana HOM05D000151 ORTHO05D000074 1.6e-128 463.0 252 88.5
Haze_14722 Corylus avellana HOM05D000151 ORTHO05D000074 3.3e-94 349.0 260 68.1
Haze_07470 Corylus avellana HOM05D042226 ORTHO05D000074 2.4e-60 236.5 231 57.6
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 1.9e-20 104.0 275 30.9
Dinv03024 Davidia involucrata HOM05D023978 ORTHO05D000074 1.6e-19 100.9 249 34.9
Dinv28194 Davidia involucrata HOM05D002577 ORTHO05D009136 1.1e-17 94.7 265 30.6
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 9.6e-17 91.7 247 32.8
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-15 87.4 252 31.7
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 9.0e-15 85.1 252 31.7
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 1.3e-13 81.3 243 30.9
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 5.0e-13 79.3 174 31.0
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 5.0e-13 79.3 174 31.0
Aqoxy5G01063 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-12 78.2 253 30.0
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 3.2e-12 76.6 240 29.6
CAN.G1203.1 Capsicum annuum HOM05D013589 ORTHO05D009136 5.5e-12 75.9 164 31.7
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 7.1e-12 75.5 231 28.1
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 4.6e-11 72.8 231 27.7
Lj1P1142T22 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-10 71.2 197 30.5
Aqoxy5G01069 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-10 70.9 237 30.0
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 2.3e-10 70.5 189 31.2
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 3.0e-10 70.1 148 35.8
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.9e-10 69.7 247 31.2
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.1e-09 68.2 234 27.8
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.1e-09 68.2 223 31.4
TPR.G38135 Trifolium pratense HOM05D000151 ORTHO05D000074 2.5e-09 67.0 246 26.4
Dinv03061 Davidia involucrata HOM05D000151 ORTHO05D000074 3.3e-09 66.6 130 36.9
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 3.3e-09 66.6 168 34.5
Rhsim12G0122800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.3e-09 66.6 250 27.2
Dinv14673 Davidia involucrata HOM05D000151 ORTHO05D000074 4.3e-09 66.2 166 33.1
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.7e-09 65.9 195 32.8
Haze_25739 Corylus avellana HOM05D015779 ORTHO05D000074 7.4e-09 65.5 129 37.2
Haze_25741 Corylus avellana HOM05D015779 ORTHO05D000074 7.4e-09 65.5 129 37.2
BcaB03g13448 Brassica carinata HOM05D000930 ORTHO05D000748 9.7e-09 65.1 270 23.0
TWI56G0047 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.3e-08 64.7 195 28.7
Lj2A480T50 Lonicera japonica HOM05D000151 ORTHO05D000074 1.6e-08 64.3 212 32.5
Lj2P549T12 Lonicera japonica HOM05D000151 ORTHO05D000074 2.2e-08 63.9 180 34.4
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 2.8e-08 63.5 166 32.5
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.7e-08 63.2 166 31.9
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 3.7e-08 63.2 219 31.1
Rhsim07G0073900 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.7e-08 63.2 288 27.1
Solyc02g070830.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.7e-08 63.2 211 27.5
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.8e-08 62.8 243 30.5
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.3e-08 62.4 166 32.5
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 6.3e-08 62.4 228 27.6
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 8.2e-08 62.0 236 31.4
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-07 61.6 244 28.7
arahy.Tifrunner.gnm1.ann1.2H6W8Q Arachis hypogaea HOM05D000151 ORTHO05D000074 1.1e-07 61.6 167 30.5
arahy.Tifrunner.gnm1.ann1.F20K0V Arachis hypogaea HOM05D000151 ORTHO05D000074 1.1e-07 61.6 167 30.5
Lj7P286T29 Lonicera japonica HOM05D000151 ORTHO05D000074 1.1e-07 61.6 71 42.3
Aqoxy6G01884 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-07 61.2 285 26.3
arahy.Tifrunner.gnm1.ann1.65DGHI Arachis hypogaea HOM05D000151 ORTHO05D000074 1.4e-07 61.2 171 30.4
arahy.Tifrunner.gnm1.ann1.F1QGJW Arachis hypogaea HOM05D000151 ORTHO05D000074 1.4e-07 61.2 171 30.4
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 1.4e-07 61.2 241 29.0
HanXRQChr05g0145731 Helianthus annuus HOM05D000151 ORTHO05D000074 1.8e-07 60.8 174 27.6
Cfa003244 Carpinus fangiana HOM05D015779 ORTHO05D000074 2.4e-07 60.5 186 28.5
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 2.4e-07 60.5 201 28.9
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 2.4e-07 60.5 248 27.8
FvH4_4g29670 Fragaria vesca HOM05D000151 ORTHO05D000074 3.1e-07 60.1 246 24.8
Lj7P286T40 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-07 60.1 71 42.3
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.1e-07 60.1 206 29.1
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 3.1e-07 60.1 201 26.9
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 4.1e-07 59.7 212 26.4
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 5.3e-07 59.3 222 29.7
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 5.3e-07 59.3 186 30.6
Lj3C74T1 Lonicera japonica HOM05D000151 ORTHO05D000074 5.3e-07 59.3 201 30.8
Sopen02g036600 Solanum pennellii HOM05D000151 ORTHO05D000074 5.3e-07 59.3 252 29.0
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.9e-07 58.9 246 26.8
CiPaw.06G046500 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.9e-07 58.9 208 23.6
QL01p002550 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-07 58.9 194 27.3
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 9.0e-07 58.5 208 23.6
Lj2C486T7 Lonicera japonica HOM05D000151 ORTHO05D000074 9.0e-07 58.5 176 31.8
Lj2P493T31 Lonicera japonica HOM05D000151 ORTHO05D000074 9.0e-07 58.5 172 30.8
Lj2P494T39 Lonicera japonica HOM05D000151 ORTHO05D000074 9.0e-07 58.5 138 33.3
QL11p010874 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-06 58.2 128 35.2
Sopen02g036610 Solanum pennellii HOM05D000644 ORTHO05D000504 1.2e-06 58.2 265 28.3
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.2 256 28.1
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 213 29.1
Oeu017909.1 Olea europaea HOM05D000151 ORTHO05D000074 1.5e-06 57.8 220 27.3
Rhsim07G0073800 Rhododendron simsii HOM05D002241 ORTHO05D002458 1.5e-06 57.8 281 24.2
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 2.0e-06 57.4 251 27.5
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.6e-06 57.0 166 29.5
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.6e-06 57.0 128 35.2
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.4e-06 56.6 219 29.2
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 3.4e-06 56.6 245 29.0
RcHm_v2.0_Chr4g0395201 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 56.6 237 26.6
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 56.6 219 27.9
Ah.13g069050 Amaranthus hybridus HOM05D000151 ORTHO05D000074 4.5e-06 56.2 166 27.7
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.5e-06 56.2 222 28.4
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 4.5e-06 56.2 246 26.4
Lj2C483T3 Lonicera japonica HOM05D000151 ORTHO05D000074 4.5e-06 56.2 176 31.8
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 4.5e-06 56.2 145 33.1
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 5.9e-06 55.8 155 29.7
Eucgr.F03527 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.9e-06 55.8 191 29.3
Lj2P471T10 Lonicera japonica HOM05D000151 ORTHO05D000074 5.9e-06 55.8 147 32.7
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 5.9e-06 55.8 197 28.9
FvH4_4g29690 Fragaria vesca HOM05D000151 ORTHO05D000074 7.7e-06 55.5 247 25.1
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 7.7e-06 55.5 255 26.7
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 7.7e-06 55.5 173 26.6
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.7e-06 55.5 174 27.6
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-05 55.1 130 35.4
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.0e-05 55.1 219 25.6
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 1.0e-05 55.1 206 30.6
MBI15_g47572_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.0e-05 55.1 224 30.8
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 1.0e-05 55.1 220 29.5


User provided reference genes

Program Settings