Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 6.5e-296 1020.0 529 100.0
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.7e-187 659.8 548 70.4
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.5e-186 654.8 550 67.5
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.4e-157 560.5 545 57.4
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 5.6e-154 548.5 554 56.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-150 537.0 549 55.2
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.4e-149 533.9 532 56.6
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.2e-148 530.8 538 55.2
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 2.5e-146 523.1 449 61.2
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.6e-145 519.2 539 55.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 4.0e-144 515.8 534 54.7
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 7.6e-143 511.5 409 65.0
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.4e-141 507.3 553 54.6
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 5.4e-141 505.4 550 54.9
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.5e-140 502.7 411 64.7
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 6.0e-140 501.9 542 56.6
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.3e-139 500.0 528 54.2
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.3e-138 495.0 341 72.7
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.6e-138 494.6 474 57.6
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 4.7e-137 492.3 417 62.6
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 1.1e-136 491.1 532 53.9
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 1.1e-136 491.1 413 61.3
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 3.1e-136 489.6 410 62.0
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.1e-136 489.6 409 63.3
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 2.0e-135 486.9 406 61.3
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 5.8e-135 485.3 404 61.9
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 9.9e-135 484.6 516 53.7
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.2e-134 483.4 419 60.6
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 3.8e-134 482.6 524 52.9
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 6.4e-134 481.9 404 62.6
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.9e-133 480.3 307 76.9
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.4e-133 478.8 424 59.9
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 7.1e-133 478.4 414 60.4
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 7.1e-133 478.4 572 50.7
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 9.3e-133 478.0 418 60.8
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-132 477.2 403 61.5
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.0e-131 474.6 417 58.5
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 3.0e-131 473.0 421 58.4
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 5.6e-130 468.8 519 50.9
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 8.1e-129 464.9 405 60.7
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 7.6e-127 458.4 410 59.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 9.9e-127 458.0 464 56.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.7e-126 457.2 404 59.7
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 4.9e-126 455.7 429 56.6
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.1e-125 454.5 419 56.3
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.4e-125 454.1 473 57.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.4e-125 453.4 405 58.8
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 7.1e-125 451.8 473 54.1
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 7.1e-125 451.8 528 50.0
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.6e-124 450.7 410 57.6
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 6.0e-124 448.7 404 57.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 1.8e-123 447.2 404 57.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 2.3e-123 446.8 418 57.4
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 3.9e-123 446.0 401 57.6
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.9e-123 446.0 415 57.8
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.7e-123 445.3 333 68.8
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-122 444.5 357 62.7
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.5e-122 444.1 403 58.8
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 4.3e-122 442.6 405 57.5
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.6e-122 442.2 365 61.1
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.3e-121 441.0 409 57.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.1e-121 440.3 388 59.3
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.8e-121 439.9 365 60.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.7e-121 439.5 358 63.1
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 5.3e-120 435.6 414 56.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 5.3e-120 435.6 414 56.5
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 9.0e-120 434.9 316 66.1
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.0e-120 434.9 446 52.9
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-119 434.1 403 58.3
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 2.0e-119 433.7 439 53.8
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 7.6e-119 431.8 325 67.4
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.3e-118 431.0 399 56.9
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.8e-118 429.5 403 57.1
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 4.9e-118 429.1 435 54.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.4e-117 427.6 388 58.5
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.4e-117 426.8 344 62.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.2e-116 424.5 332 63.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-116 423.3 396 57.6
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.0e-115 421.4 418 54.5
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.3e-115 421.0 390 56.7
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.0e-115 419.9 405 56.3
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.1e-115 419.1 372 58.3
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.1e-114 417.9 402 56.2
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.9e-114 417.2 416 53.1
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 4.0e-112 409.5 361 59.6
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.0e-111 407.1 416 53.8
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 2.6e-111 406.8 405 54.6
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.2e-109 399.8 359 59.6
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.5e-106 390.2 449 49.2
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.9e-102 376.7 256 71.1
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 5.5e-101 372.5 236 75.4
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 6.1e-100 369.0 312 62.2
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 7.9e-100 368.6 418 52.2
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-98 364.8 429 48.5
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.5e-98 364.4 341 55.1
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.4e-98 362.1 388 52.3
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.3e-89 334.7 330 53.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 6.1e-76 289.3 420 44.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.0e-74 284.3 360 48.6
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.1e-72 278.5 268 55.6
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.2e-71 275.0 210 66.2
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 4.7e-68 263.1 280 51.8
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.6e-66 257.3 287 44.9
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.3e-65 255.0 286 51.0
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 5.4e-64 249.6 227 57.3
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.0e-62 243.0 284 47.9
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 9.2e-56 222.2 195 61.5
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.9e-54 217.2 191 56.0
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.4e-50 203.4 201 53.2
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.5e-50 202.6 268 43.7
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 2.9e-49 200.7 218 48.6
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.7e-49 200.3 231 45.0
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 4.1e-48 196.8 200 55.5
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.1e-44 184.5 202 50.0
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.3e-38 164.5 186 50.0
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 3.6e-36 157.1 146 54.1
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 4.4e-34 150.2 197 48.2
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.7e-33 148.3 111 64.0
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 2.4e-32 144.4 220 44.1
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 9.2e-32 142.5 331 32.6
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.6e-31 141.7 236 41.9
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 6.0e-31 139.8 271 42.1
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 7.3e-29 132.9 146 53.4
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 6.2e-28 129.8 84 66.7
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-24 119.0 206 36.9
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 3.2e-24 117.5 78 71.8
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 5.4e-24 116.7 104 59.6
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 9.2e-24 115.9 77 75.3
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.7e-22 111.7 107 56.1
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.9e-21 108.2 176 35.2
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.5e-21 107.8 351 26.8
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 8.1e-20 102.8 107 52.3
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.8e-19 101.7 63 74.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.8e-19 101.7 60 85.0
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.8e-19 101.7 322 27.3
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 2.6e-18 97.8 107 49.5
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 6.0e-15 86.7 58 67.2
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 3.0e-14 84.3 253 27.7
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 3.9e-14 84.0 253 26.5
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 8.7e-14 82.8 287 23.7
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.5e-13 82.0 253 26.1
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 2.1e-12 78.2 62 62.9
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 3.1e-11 74.3 62 51.6
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 4.0e-11 73.9 259 25.9
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.0e-10 71.6 252 25.4
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 4.9e-09 67.0 192 27.1


User provided reference genes

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