Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.6e-239 831.6 424 100.0
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 6.0e-167 591.3 403 76.7
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.5e-146 523.5 401 68.8
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.0e-142 509.2 404 69.1
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.9e-142 508.8 404 68.8
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 5.1e-142 508.4 402 68.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.8e-142 507.7 404 69.1
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.9e-141 506.5 402 68.2
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 2.8e-140 502.7 401 65.6
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.8e-140 502.7 404 68.3
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 8.2e-140 501.1 401 66.3
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 8.2e-140 501.1 401 66.3
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.4e-139 500.4 406 67.5
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 2.4e-139 499.6 401 65.8
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 6.9e-139 498.0 401 64.8
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 6.9e-139 498.0 409 65.0
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.7e-137 493.4 403 64.5
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 3.8e-137 492.3 401 66.6
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 1.4e-136 490.3 399 65.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 2.5e-136 489.6 383 66.8
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 5.5e-136 488.4 401 64.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 5.5e-136 488.4 401 66.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 1.0e-134 484.2 400 65.2
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.3e-134 483.0 403 66.3
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.6e-133 479.6 403 65.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.6e-133 479.6 402 63.7
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 7.4e-133 478.0 411 63.0
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.3e-132 477.2 401 63.6
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.7e-132 476.9 404 63.4
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 9.1e-131 471.1 399 63.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 1.7e-129 466.8 407 62.4
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.0e-129 465.3 400 61.2
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 6.5e-129 464.9 400 61.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 1.4e-128 463.8 436 59.2
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 7.2e-128 461.5 397 62.5
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.2e-128 461.5 400 61.0
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 6.1e-127 458.4 376 63.3
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 8.0e-127 458.0 398 62.6
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.8e-126 456.8 390 61.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 2.3e-126 456.4 400 63.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 6.7e-126 454.9 403 62.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 3.7e-124 449.1 400 61.2
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.1e-123 446.0 400 60.8
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.1e-123 446.0 400 60.8
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 7.0e-123 444.9 403 59.6
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.7e-121 440.3 378 61.6
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 2.9e-121 439.5 402 59.7
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.0e-121 438.7 402 59.5
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 5.0e-121 438.7 402 59.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 6.5e-121 438.3 386 59.8
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 8.0e-119 431.4 403 58.3
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.8e-118 430.3 405 56.8
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.0e-117 426.8 385 60.0
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.2e-116 423.3 400 58.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.8e-116 422.9 401 55.4
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.1e-115 421.0 405 55.6
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.1e-115 421.0 346 63.3
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 7.7e-114 414.8 386 59.1
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 3.8e-113 412.5 359 61.8
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 4.7e-111 405.6 405 54.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 5.2e-110 402.1 373 60.3
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.4e-109 399.4 373 59.0
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 4.5e-106 389.0 286 72.7
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.3e-105 387.5 407 52.3
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 2.3e-105 386.7 407 52.6
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 2.5e-104 383.3 407 52.1
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 4.2e-104 382.5 409 51.6
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.2e-103 380.9 409 51.3
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.8e-103 379.8 407 51.6
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 8.0e-103 378.3 407 51.6
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.8e-102 377.1 407 51.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.8e-102 377.1 407 51.4
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 6.8e-102 375.2 407 51.4
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 8.9e-102 374.8 384 51.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.6e-101 373.2 402 51.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 1.7e-100 370.5 399 53.9
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.2e-100 370.2 402 50.7
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.7e-98 363.2 340 59.7
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.0e-97 359.0 357 52.7
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.2e-92 343.6 341 58.4
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 8.6e-89 331.6 259 67.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.4e-85 319.7 389 47.3
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.9e-84 315.8 413 46.0
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.5e-80 304.3 396 44.7
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 9.5e-80 301.6 395 44.6
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.8e-77 292.4 213 68.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.9e-73 279.6 378 44.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.6e-71 273.1 373 41.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 7.6e-69 265.4 395 42.3
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.3e-68 264.6 343 47.5
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 7.6e-61 238.8 342 43.9
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 6.2e-55 219.2 197 60.4
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.1e-54 216.9 378 36.8
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.2e-52 210.7 370 39.2
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 6.4e-52 209.1 569 30.6
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 2.3e-41 174.1 247 41.3
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 5.6e-40 169.5 152 59.2
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.3e-36 158.3 132 61.4
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 5.0e-28 129.8 172 47.1
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 7.9e-26 122.5 123 53.7
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 6.9e-22 109.4 78 67.9
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 3.4e-21 107.1 389 26.5
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.0e-20 105.5 132 50.8
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.8e-17 94.7 214 33.6
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 4.5e-13 80.1 46 84.8
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.9e-13 79.7 48 83.3
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.9e-12 77.4 80 55.0
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.9e-11 74.7 45 80.0
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 3.2e-11 73.9 38 89.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 5.5e-11 73.2 49 73.5
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 7.2e-11 72.8 75 53.3
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 8.2e-07 59.3 43 60.5


User provided reference genes

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