Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.1e-34 149.4 75 100.0
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.8e-29 132.1 75 89.3
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 3.0e-21 104.8 63 77.8
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-18 95.9 75 65.3
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.2e-17 92.8 76 68.4
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.0e-16 89.7 69 65.2
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 3.6e-14 81.3 75 56.0
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.0e-14 80.1 62 67.7
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 4.0e-13 77.8 80 56.2
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 4.0e-13 77.8 80 56.2
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.5e-12 75.9 76 52.6
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.6e-12 75.1 75 58.7
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.6e-12 75.1 54 72.2
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 1.3e-11 72.8 66 59.1
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.8e-11 70.9 61 62.3
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.3e-11 70.5 61 60.7
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 8.3e-11 70.1 75 52.0
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.4e-10 68.6 58 60.3
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.4e-10 68.6 59 57.6
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.4e-10 68.6 59 57.6
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 5.3e-10 67.4 66 54.5
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 7.0e-10 67.0 53 60.4
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 9.1e-10 66.6 55 60.0
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 9.1e-10 66.6 76 50.0
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 2.7e-09 65.1 75 46.7
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 3.5e-09 64.7 68 51.5
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 7.7e-09 63.5 69 52.2
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 1.0e-08 63.2 78 51.3
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.0e-08 63.2 57 54.4
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 1.0e-08 63.2 64 56.2
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.7e-08 62.4 70 52.9
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.7e-08 62.4 61 47.5
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.2e-08 62.0 54 61.1
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 2.2e-08 62.0 54 61.1
Ciclev10023125m.g Citrus clementina HOM05D008114 ORTHO05D010089 3.8e-08 61.2 70 45.7
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 3.8e-08 61.2 63 47.6
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 6.5e-08 60.5 64 46.9
Migut.I00449 Erythranthe guttata HOM05D008114 ORTHO05D010089 8.5e-08 60.1 53 52.8
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 1.1e-07 59.7 47 55.3
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.1e-07 59.7 55 52.7
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.1e-07 59.7 55 52.7
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.9e-07 58.9 77 45.5
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 3.2e-07 58.2 54 50.0
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 4.2e-07 57.8 68 50.0
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 7.2e-07 57.0 65 49.2
Nitab4.5_0000694g0130 Nicotiana tabacum HOM05D040682 ORTHO05D010089 7.2e-07 57.0 66 48.5
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.2e-06 56.2 56 51.8
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.6e-06 55.8 54 55.6
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 6.1e-06 53.9 67 46.3
Nitab4.5_0002112g0070 Nicotiana tabacum HOM05D040682 ORTHO05D010089 6.1e-06 53.9 67 47.8
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 8.0e-06 53.5 68 48.5


User provided reference genes

Program Settings