Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 3.8e-36 154.5 85 100.0
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.1e-22 108.2 74 77.0
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 6.9e-22 107.1 74 75.7
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 5.8e-21 104.0 73 74.0
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.3e-20 102.8 74 73.0
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.2e-20 102.1 74 71.6
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.2e-20 102.1 74 70.3
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.2e-20 102.1 74 70.3
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.8e-20 101.3 74 71.6
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.8e-20 101.3 73 74.0
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 6.5e-20 100.5 74 70.3
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.1e-19 99.8 74 66.2
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.4e-19 99.4 74 68.9
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 1.9e-19 99.0 74 78.4
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 3.2e-19 98.2 80 63.8
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 4.2e-19 97.8 74 81.1
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 7.1e-19 97.1 74 66.2
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 7.1e-19 97.1 74 67.6
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 4.6e-18 94.4 74 66.2
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.6e-18 94.4 73 67.1
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 6.0e-18 94.0 74 64.9
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 6.0e-18 94.0 74 63.5
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 6.0e-18 94.0 73 68.5
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 7.9e-18 93.6 74 67.6
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 7.9e-18 93.6 73 64.4
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.3e-17 92.8 70 67.1
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 1.3e-17 92.8 74 68.9
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.8e-17 92.4 74 66.2
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 2.3e-17 92.0 74 64.9
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 3.0e-17 91.7 74 66.2
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 3.0e-17 91.7 75 72.0
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 3.9e-17 91.3 73 69.9
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 5.1e-17 90.9 78 61.5
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 8.7e-17 90.1 74 60.8
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.1e-16 89.7 74 71.6
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.1e-16 89.7 74 64.9
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.5e-16 89.4 73 61.6
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 1.9e-16 89.0 74 62.2
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.5e-16 88.6 74 73.0
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 4.3e-16 87.8 74 60.8
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 7.4e-16 87.0 70 61.4
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 7.4e-16 87.0 73 61.6
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 9.7e-16 86.7 70 62.9
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 9.7e-16 86.7 70 62.9
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 9.7e-16 86.7 78 56.4
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.3e-15 86.3 74 62.2
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 1.3e-15 86.3 75 68.0
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.6e-15 85.9 74 68.9
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.6e-15 85.9 87 57.5
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.2e-15 85.5 73 58.9
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 3.7e-15 84.7 73 60.3
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.4e-14 82.8 70 61.4
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 1.8e-14 82.4 70 60.0
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.8e-14 82.4 89 61.8
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.5e-13 79.3 74 58.1
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 5.9e-13 77.4 74 54.1
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 1.0e-12 76.6 58 67.2
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.9e-12 75.1 74 62.2
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 3.8e-12 74.7 73 52.1
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 8.5e-12 73.6 74 60.8
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.1e-11 73.2 74 63.5
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 1.4e-11 72.8 74 60.8
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 5.5e-11 70.9 74 59.5
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 7.2e-11 70.5 77 51.9
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 1.2e-10 69.7 74 56.8
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 1.2e-10 69.7 74 56.8
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 1.2e-10 69.7 74 56.8
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 1.2e-10 69.7 74 58.1
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 2.7e-10 68.6 74 58.1
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 1.4e-09 66.2 70 51.4
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 1.8e-09 65.9 74 55.4
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 1.8e-09 65.9 74 55.4
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 3.9e-09 64.7 74 55.4
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 1.1e-08 63.2 73 56.2
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.5e-08 62.8 100 49.0
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.5e-08 62.8 73 57.5
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.9e-08 62.4 72 48.6
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 5.7e-08 60.8 73 57.5
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 4.8e-07 57.8 73 54.8
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 4.8e-07 57.8 73 53.4
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 1.4e-06 56.2 73 53.4
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.4e-06 56.2 53 58.5


User provided reference genes

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