Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 4.5e-65 251.1 130 100.0
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 8.3e-59 230.3 124 96.8
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 1.5e-52 209.5 131 85.5
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 3.2e-26 122.1 130 53.8
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 2.5e-23 112.5 122 54.1
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 7.3e-23 110.9 130 52.3
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 3.6e-22 108.6 129 48.1
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 6.2e-22 107.8 103 54.4
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 8.9e-21 104.0 123 51.2
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 1.5e-20 103.2 105 54.3
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 3.8e-19 98.6 91 53.8
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 4.9e-19 98.2 107 53.3
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 1.4e-18 96.7 76 55.3
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 1.2e-17 93.6 112 46.4
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 2.7e-17 92.4 113 46.0
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 2.7e-17 92.4 113 46.0
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 2.7e-17 92.4 101 52.5
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 4.6e-17 91.7 113 46.0
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 4.6e-17 91.7 113 46.0
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 6.0e-17 91.3 113 45.1
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 1.0e-16 90.5 107 49.5
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.3e-16 90.1 92 52.2
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.3e-16 89.4 140 46.4
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 6.6e-16 87.8 77 59.7
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 6.6e-16 87.8 115 52.2
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 8.7e-16 87.4 135 43.0
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 8.7e-16 87.4 135 43.0
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 8.7e-16 87.4 109 47.7
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 1.1e-15 87.0 112 43.8
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 1.9e-15 86.3 125 42.4
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.9e-15 86.3 89 56.2
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.5e-15 85.9 135 42.2
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 3.3e-15 85.5 116 45.7
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 3.3e-15 85.5 95 49.5
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 5.6e-15 84.7 105 46.7
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 1.3e-14 83.6 113 44.2
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.3e-14 83.6 79 60.8
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.6e-14 83.2 102 53.9
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 2.1e-14 82.8 100 45.0
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 3.6e-14 82.0 125 41.6
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 8.1e-14 80.9 143 45.5
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 1.1e-13 80.5 103 49.5
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.1e-13 80.5 73 60.3
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.4e-13 80.1 88 53.4
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 3.1e-13 79.0 74 60.8
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 4.0e-13 78.6 122 43.4
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 5.3e-13 78.2 72 54.2
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 5.3e-13 78.2 72 54.2
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 1.5e-12 76.6 88 58.0
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 2.6e-12 75.9 74 60.8
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 2.6e-12 75.9 123 46.3
PGR044G2003 Punica granatum HOM05D007960 ORTHO05D010026 9.9e-12 73.9 114 36.8
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.3e-11 73.6 100 46.0
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.3e-11 73.6 66 60.6
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 2.9e-11 72.4 78 51.3
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 3.8e-11 72.0 97 43.3
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 1.1e-10 70.5 54 51.9
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 1.6e-09 66.6 61 57.4
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 3.5e-09 65.5 76 47.4
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 3.5e-09 65.5 95 40.0
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 3.5e-09 65.5 110 39.1
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 6.0e-09 64.7 121 35.5
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.0e-08 63.9 110 39.1
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 3.9e-08 62.0 100 41.0
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 8.7e-08 60.8 113 36.3
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 8.7e-08 60.8 124 37.9
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 1.1e-07 60.5 103 40.8
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 1.5e-07 60.1 100 41.0
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 4.3e-07 58.5 85 42.4
Dinv36868 Davidia involucrata HOM05D007960 ORTHO05D010026 7.3e-07 57.8 114 35.1
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 7.3e-07 57.8 110 37.3
ATR0730G210 Amborella trichopoda HOM05D022024 ORTHO05D009245 2.1e-06 56.2 49 53.1
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 2.1e-06 56.2 54 55.6
TWI14G0246 Tripterygium wilfordii HOM05D056897 ORTHO05D010026 4.8e-06 55.1 125 36.8


User provided reference genes

Program Settings