Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18530 Corylus avellana HOM05D003972 ORTHO05D004609 3.6e-132 474.9 246 100.0
Haze_20480 Corylus avellana HOM05D003972 ORTHO05D004609 1.2e-74 283.9 150 97.3
Haze_03211 Corylus avellana HOM05D000015 ORTHO05D004609 1.6e-55 220.3 167 74.9
CiPaw.13G004600 Carya illinoinensis HOM05D003972 ORTHO05D004609 5.6e-48 195.3 172 61.0
TAR633G1993 Trochodendron aralioides HOM05D003972 ORTHO05D004609 3.6e-47 192.6 153 66.7
CSS0031611 Camellia sinensis var. sinensis HOM05D003972 ORTHO05D004609 2.3e-46 189.9 150 68.0
Prupe.2G012700 Prunus persica HOM05D003972 ORTHO05D004609 2.3e-46 189.9 154 63.6
TAR633G2347 Trochodendron aralioides HOM05D003972 ORTHO05D004609 2.3e-46 189.9 154 65.6
Hund16627 Selenicereus undatus HOM05D003972 ORTHO05D004609 3.1e-46 189.5 191 56.0
Thecc.01G411300 Theobroma cacao HOM05D003972 ORTHO05D004609 4.0e-46 189.1 149 67.8
Nn2g15387 Nelumbo nucifera HOM05D003972 ORTHO05D004609 1.5e-45 187.2 174 60.3
QL04p006659 Quercus lobata HOM05D003972 ORTHO05D004609 2.6e-45 186.4 150 66.7
Gohir.A12G094100 Gossypium hirsutum HOM05D003972 ORTHO05D004609 7.5e-45 184.9 179 59.2
Gohir.D12G096966 Gossypium hirsutum HOM05D003972 ORTHO05D004609 9.8e-45 184.5 179 59.2
Duzib138G0053 Durio zibethinus HOM05D003972 ORTHO05D004609 1.7e-44 183.7 147 66.0
RcHm_v2.0_Chr1g0315911 Rosa chinensis HOM05D003972 ORTHO05D004609 1.7e-44 183.7 154 63.6
COL.COLO4_23932 Corchorus olitorius HOM05D003972 ORTHO05D004609 2.2e-44 183.3 149 66.4
Gorai.008G105300 Gossypium raimondii HOM05D003972 ORTHO05D004609 2.2e-44 183.3 177 59.3
Atru.chr11.2659 Acer truncatum HOM05D003972 ORTHO05D004609 2.9e-44 183.0 148 65.5
MD07G1010400 Malus domestica HOM05D003972 ORTHO05D004609 2.9e-44 183.0 149 63.1
Sopen01g034180 Solanum pennellii HOM05D003972 ORTHO05D004609 2.9e-44 183.0 183 56.8
Sed0003633 Sechium edule HOM05D003972 ORTHO05D004609 4.9e-44 182.2 167 59.3
PGSC0003DMG400006869 Solanum tuberosum HOM05D003972 ORTHO05D004609 4.9e-44 182.2 154 61.7
FAN01G2341 Fragaria x ananassa HOM05D003972 ORTHO05D004609 6.4e-44 181.8 153 63.4
FAN06G4274 Fragaria x ananassa HOM05D003972 ORTHO05D004609 6.4e-44 181.8 154 63.0
FAN10G2592 Fragaria x ananassa HOM05D003972 ORTHO05D004609 6.4e-44 181.8 154 63.0
MD02G1312800 Malus domestica HOM05D003972 ORTHO05D004609 6.4e-44 181.8 149 63.8
Oeu047573.1 Olea europaea HOM05D003972 ORTHO05D004609 1.4e-43 180.6 176 56.8
Solyc01g087120.3 Solanum lycopersicum HOM05D003972 ORTHO05D004609 1.4e-43 180.6 183 56.3
FvH4_7g01010 Fragaria vesca HOM05D003972 ORTHO05D004609 1.9e-43 180.3 154 62.3
PSO384G2850 Papaver somniferum HOM05D003972 ORTHO05D004609 1.9e-43 180.3 171 57.3
TWI73G1179 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 1.9e-43 180.3 167 58.7
Ciclev10032620m.g Citrus clementina HOM05D003972 ORTHO05D004609 2.4e-43 179.9 154 62.3
FAN03G0639 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.2e-43 179.5 153 62.7
Lj7A570T56 Lonicera japonica HOM05D003972 ORTHO05D004609 1.2e-42 177.6 151 64.2
Manes.10G143400 Manihot esculenta HOM05D003972 ORTHO05D004609 1.2e-42 177.6 149 63.8
Nitab4.5_0000634g0150 Nicotiana tabacum HOM05D003972 ORTHO05D004609 1.2e-42 177.6 152 63.2
Nitab4.5_0002179g0040 Nicotiana tabacum HOM05D003972 ORTHO05D004609 1.2e-42 177.6 155 61.9
PSO339G6021 Papaver somniferum HOM05D003972 ORTHO05D004609 1.6e-42 177.2 171 56.1
MBI04_g36067_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 2.1e-42 176.8 171 59.1
Nn7g36192 Nelumbo nucifera HOM05D003972 ORTHO05D004609 2.1e-42 176.8 174 56.9
Duzib268G1708 Durio zibethinus HOM05D003972 ORTHO05D004609 2.7e-42 176.4 148 64.9
CAN.G1560.6 Capsicum annuum HOM05D003972 ORTHO05D004609 3.5e-42 176.0 152 62.5
Peaxi162Scf00428g00211 Petunia axillaris HOM05D003972 ORTHO05D004609 3.5e-42 176.0 159 60.4
Aqoxy2G00123 Aquilegia oxysepala HOM05D003972 ORTHO05D004609 6.0e-42 175.3 149 60.4
HanXRQChr01g0016231 Helianthus annuus HOM05D003972 ORTHO05D004609 7.8e-42 174.9 153 59.5
HanXRQChr16g0524521 Helianthus annuus HOM05D003972 ORTHO05D004609 1.0e-41 174.5 149 61.1
Lsat_1_v5_gn_1_107400 Lactuca sativa HOM05D003972 ORTHO05D004609 1.0e-41 174.5 164 57.3
PGR044G2681 Punica granatum HOM05D003972 ORTHO05D004609 1.7e-41 173.7 148 62.8
MSTRG.28071 Avicennia marina HOM05D003972 ORTHO05D004609 2.3e-41 173.3 148 63.5
ClCG09G004190 Citrullus lanatus HOM05D003972 ORTHO05D004609 2.3e-41 173.3 153 60.8
Sc11g0009210 Simmondsia chinensis HOM05D003972 ORTHO05D004609 2.3e-41 173.3 115 73.9
Lsat_1_v5_gn_1_107421 Lactuca sativa HOM05D003972 ORTHO05D004609 3.0e-41 172.9 149 60.4
Sed0017110 Sechium edule HOM05D003972 ORTHO05D004609 3.9e-41 172.6 154 59.1
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 5.1e-41 172.2 149 60.4
QL04p007936 Quercus lobata HOM05D003972 ORTHO05D004609 5.1e-41 172.2 176 56.8
CDE05G0778 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 6.6e-41 171.8 165 55.8
MBI01_g18885_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 6.6e-41 171.8 154 63.0
Rhsim07G0055300 Rhododendron simsii HOM05D003972 ORTHO05D004609 8.6e-41 171.4 154 59.7
TWI09G1021 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 8.6e-41 171.4 167 56.9
Actinidia20668 Actinidia chinensis HOM05D003972 ORTHO05D004609 1.1e-40 171.0 184 50.0
ECA248G3800 Erigeron canadensis HOM05D003972 ORTHO05D004609 1.1e-40 171.0 153 58.2
Lj9A631T54 Lonicera japonica HOM05D003972 ORTHO05D004609 1.1e-40 171.0 123 71.5
Hund14179 Selenicereus undatus HOM05D003972 ORTHO05D004609 1.1e-40 171.0 148 61.5
vmacro13664 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 1.5e-40 170.6 149 59.7
CANSAT80G0274 Cannabis sativa HOM05D003972 ORTHO05D004609 1.9e-40 170.2 186 53.8
EL10Ac3g05626 Beta vulgaris HOM05D003972 ORTHO05D004609 2.5e-40 169.9 148 58.1
Migut.N01593 Erythranthe guttata HOM05D003972 ORTHO05D004609 4.3e-40 169.1 163 58.3
HanXRQChr17g0562951 Helianthus annuus HOM05D003972 ORTHO05D004609 5.6e-40 168.7 118 69.5
PGR042G2196 Punica granatum HOM05D003972 ORTHO05D004609 7.3e-40 168.3 149 61.7
Cc02_g27920 Coffea canephora HOM05D003972 ORTHO05D004609 9.5e-40 167.9 180 52.8
Oeu006575.2 Olea europaea HOM05D003972 ORTHO05D004609 9.5e-40 167.9 115 73.9
AUR62027419 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.6e-39 167.2 160 54.4
MELO3C023548.2 Cucumis melo HOM05D003972 ORTHO05D004609 1.6e-39 167.2 154 56.5
MSTRG.5022 Avicennia marina HOM05D003972 ORTHO05D004609 2.1e-39 166.8 152 59.2
Ca_14380_v3 Cicer arietinum L. HOM05D003972 ORTHO05D004609 2.1e-39 166.8 158 57.6
Glyma.08G155200 Glycine max HOM05D003972 ORTHO05D004609 2.1e-39 166.8 156 58.3
Glyma.15G273900 Glycine max HOM05D003972 ORTHO05D004609 2.1e-39 166.8 158 57.0
SalBow5G3531 Salvia bowleyana HOM05D003972 ORTHO05D004609 2.1e-39 166.8 151 59.6
AUR62009382 Chenopodium quinoa HOM05D003972 ORTHO05D004609 3.6e-39 166.0 115 69.6
AUR62027358 Chenopodium quinoa HOM05D003972 ORTHO05D004609 3.6e-39 166.0 115 68.7
Oeu014581.1 Olea europaea HOM05D003972 ORTHO05D004609 3.6e-39 166.0 160 57.5
SalBow6G4991 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.6e-39 166.0 147 59.9
SalBow8G4898 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.6e-39 166.0 147 59.9
CDE05G2400 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 4.7e-39 165.6 151 57.6
TPR.G12160 Trifolium pratense HOM05D003972 ORTHO05D004609 6.2e-39 165.2 158 55.1
VMungo1080G1024 Vigna mungo HOM05D003972 ORTHO05D004609 8.1e-39 164.9 158 56.3
Os06g0646500 Oryza sativa ssp. japonica HOM05D003972 ORTHO05D004609 1.1e-38 164.5 116 69.8
Psat5g207400 Pisum sativum HOM05D003972 ORTHO05D004609 1.4e-38 164.1 158 56.3
Phvul.005G021000 Phaseolus vulgaris HOM05D003972 ORTHO05D004609 6.8e-38 161.8 158 55.1
GSVIVG01032087001 Vitis vinifera HOM05D003972 ORTHO05D004609 6.8e-38 161.8 152 57.2
ClCG10G012410 Citrullus lanatus HOM05D003972 ORTHO05D004609 1.2e-37 161.0 141 61.7
Lalb_Chr11g0073961 Lupinus albus HOM05D003972 ORTHO05D004609 1.2e-37 161.0 153 58.2
Lalb_Chr08g0232821 Lupinus albus HOM05D003972 ORTHO05D004609 1.5e-37 160.6 183 51.9
Sabra09G0045500 Salix brachista HOM05D003972 ORTHO05D004609 1.5e-37 160.6 162 52.5
HPP92_003787 Vanilla planifolia HOM05D003972 ORTHO05D004609 3.4e-37 159.5 115 64.3
Ah.06g182390 Amaranthus hybridus HOM05D003972 ORTHO05D004609 4.4e-37 159.1 115 65.2
arahy.Tifrunner.gnm1.ann1.9I3PL7 Arachis hypogaea HOM05D003972 ORTHO05D004609 4.4e-37 159.1 160 53.8
arahy.Tifrunner.gnm1.ann1.XF35YI Arachis hypogaea HOM05D003972 ORTHO05D004609 4.4e-37 159.1 160 53.8
CsaV3_7G031080 Cucumis sativus L. HOM05D003972 ORTHO05D004609 5.8e-37 158.7 154 53.2
Potri.009G061600 Populus trichocarpa HOM05D003972 ORTHO05D004609 7.6e-37 158.3 149 54.4
unitig_8.g3624 Utricularia gibba HOM05D003972 ORTHO05D004609 1.3e-36 157.5 154 54.5
Medtr3g028730 Medicago truncatula HOM05D003972 ORTHO05D004609 1.7e-36 157.1 160 53.1
Ah.06g182400 Amaranthus hybridus HOM05D003972 ORTHO05D004609 2.2e-36 156.8 156 54.5
DCAR_006337 Daucus carota HOM05D003972 ORTHO05D004609 2.2e-36 156.8 115 68.7
Aa31LG5G18610 Aethionema arabicum HOM05D003972 ORTHO05D004609 8.4e-36 154.8 148 55.4
Lj4g0010030 Lotus japonicus HOM05D003972 ORTHO05D004609 1.4e-35 154.1 148 58.1
SGA_v2.0_scaffold24G10676 Striga asiatica HOM05D003972 ORTHO05D004609 4.1e-35 152.5 133 60.9
Zm00001eb188600 Zea mays HOM05D003972 ORTHO05D004609 4.1e-35 152.5 111 68.5
RcHm_v2.0_Chr7g0187561 Rosa chinensis HOM05D003972 ORTHO05D004609 1.3e-33 147.5 148 52.7
SGA_v2.0_scaffold5G02971 Striga asiatica HOM05D003972 ORTHO05D004609 1.7e-33 147.1 159 51.6
Aa31LG3G15250 Aethionema arabicum HOM05D003972 ORTHO05D004609 3.9e-33 146.0 163 49.1
ATR0605G205 Amborella trichopoda HOM05D003972 ORTHO05D004609 6.6e-33 145.2 174 50.6
Sed0014658 Sechium edule HOM05D003972 ORTHO05D004609 6.6e-33 145.2 172 49.4
CARHR199980 Cardamine hirsuta HOM05D003972 ORTHO05D004609 8.6e-33 144.8 119 58.0
A03p05990 Brassica napus HOM05D003972 ORTHO05D004609 1.5e-32 144.1 148 52.0
Thhalv10014516m.g Eutrema salsugineum HOM05D003972 ORTHO05D004609 4.3e-32 142.5 148 50.7
C03p07030 Brassica napus HOM05D003972 ORTHO05D004609 7.3e-32 141.7 148 50.7
BolC3t13201H Brassica oleracea HOM05D003972 ORTHO05D004609 7.3e-32 141.7 148 50.7
BcaC04g19115 Brassica carinata HOM05D003972 ORTHO05D004609 1.2e-31 141.0 148 50.7
BcaNung01885 Brassica carinata HOM05D003972 ORTHO05D004609 1.2e-31 141.0 148 50.7
Sp6g30570 Schrenkiella parvula HOM05D003972 ORTHO05D004609 1.2e-31 141.0 148 50.7
THA.LOC104819071 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 1.2e-31 141.0 116 62.1
BraA03t09936Z Brassica rapa HOM05D003972 ORTHO05D004609 1.6e-31 140.6 148 50.7
BolC9t59206H Brassica oleracea HOM05D003972 ORTHO05D004609 2.1e-31 140.2 148 50.7
Carub.0006s1161 Capsella rubella HOM05D003972 ORTHO05D004609 2.1e-31 140.2 148 48.6
FAN18G0724 Fragaria x ananassa HOM05D003972 ORTHO05D004609 2.8e-31 139.8 116 59.5
FvH4_5g10590 Fragaria vesca HOM05D003972 ORTHO05D004609 3.6e-31 139.4 116 59.5
BcaNung01153 Brassica carinata HOM05D003972 ORTHO05D004609 4.7e-31 139.0 148 50.0
C09p63620 Brassica napus HOM05D003972 ORTHO05D004609 4.7e-31 139.0 148 50.7
BolC2t06557H Brassica oleracea HOM05D003972 ORTHO05D004609 4.7e-31 139.0 148 50.0
BraA10t44544Z Brassica rapa HOM05D003972 ORTHO05D004609 4.7e-31 139.0 148 50.0
A10p24800 Brassica napus HOM05D003972 ORTHO05D004609 8.1e-31 138.3 148 50.0
THA.LOC104809854 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 8.1e-31 138.3 116 58.6
AL6G24070 Arabidopsis lyrata HOM05D003972 ORTHO05D004609 1.4e-30 137.5 148 48.6
A02p01940 Brassica napus HOM05D003972 ORTHO05D004609 1.4e-30 137.5 119 56.3
BraA02t05167Z Brassica rapa HOM05D003972 ORTHO05D004609 1.4e-30 137.5 119 56.3
FAN13G3241 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.8e-30 137.1 116 58.6
AT5G13450 Arabidopsis thaliana HOM05D003972 ORTHO05D004609 1.5e-29 134.0 148 47.3
FAN04G1554 Fragaria x ananassa HOM05D003972 ORTHO05D004609 2.6e-29 133.3 116 56.0
Dinv43448 Davidia involucrata HOM05D003972 ORTHO05D004609 1.3e-28 131.0 160 47.5
SEGI_23171 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.7e-28 130.6 116 57.8
SHI04087 Sapria himalayana HOM05D003972 ORTHO05D004609 2.2e-28 130.2 150 47.3
vmacro21185 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 4.9e-28 129.0 92 76.1
BcaB06g27143 Brassica carinata HOM05D003972 ORTHO05D004609 3.2e-27 126.3 106 58.5
Rhsim01G0129500 Rhododendron simsii HOM05D003972 ORTHO05D004609 3.2e-27 126.3 115 60.0
Eucgr.I01987 Eucalyptus grandis HOM05D003972 ORTHO05D004609 1.6e-26 124.0 117 58.1
BcaB01g05358 Brassica carinata HOM05D003972 ORTHO05D004609 3.5e-26 122.9 154 48.1
SalBow5G0402 Salvia bowleyana HOM05D003972 ORTHO05D004609 7.8e-26 121.7 165 49.1
Mapoly0003s0068 Marchantia polymorpha HOM05D003972 ORTHO05D004609 1.3e-25 120.9 115 53.9
Pp3c21_15430 Physcomitrium patens HOM05D003972 ORTHO05D004609 1.3e-25 120.9 116 51.7
SEGI_22482 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.3e-25 120.9 116 56.0
Pp3c21_13430 Physcomitrium patens HOM05D003972 ORTHO05D004609 6.6e-25 118.6 116 50.9
Cpa.g.sc245.17 Carica papaya HOM05D003972 ORTHO05D004609 4.0e-22 109.4 99 58.6
CsaV3_3G032190 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.7e-20 104.0 102 55.9
CBR_g17944 Chara braunii HOM05D003972 ORTHO05D004609 4.9e-20 102.4 116 46.6
Rhsim01G0081100 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.1e-19 101.3 70 75.7
Rhsim01G0052900 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.4e-19 100.9 70 74.3
Rhsim02G0048300 Rhododendron simsii HOM05D003972 ORTHO05D004609 3.2e-19 99.8 70 72.9
Rhsim02G0189700 Rhododendron simsii HOM05D003972 ORTHO05D004609 4.2e-19 99.4 74 68.9
AagrBONN_evm.TU.Sc2ySwM_344.1217 Anthoceros agrestis HOM05D003972 ORTHO05D004609 6.0e-18 95.5 87 57.5
Actinidia21554 Actinidia chinensis HOM05D003972 ORTHO05D004609 2.3e-17 93.6 117 45.3
Pp3c11_16260 Physcomitrium patens HOM05D003972 ORTHO05D004609 3.9e-17 92.8 116 44.0
Manes.07G005701 Manihot esculenta HOM05D003972 ORTHO05D004609 5.1e-17 92.4 91 58.2
MELO3C030665.2 Cucumis melo HOM05D003972 ORTHO05D004609 4.8e-15 85.9 55 72.7
SMO228G0064 Selaginella moellendorffii HOM05D003972 ORTHO05D004609 6.9e-14 82.0 114 33.3
MCO05G116 Micromonas commoda HOM05D003972 ORTHO05D004609 8.4e-12 75.1 111 38.7
MELO3C030924.2 Cucumis melo HOM05D003972 ORTHO05D004609 2.7e-10 70.1 45 73.3
PRCOL_00004246 Prasinoderma coloniale HOM05D003972 ORTHO05D004609 1.0e-09 68.2 112 39.3


User provided reference genes

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