Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18464 Corylus avellana HOM05D013164 ORTHO05D013587 2.1e-73 278.9 134 100.0
Haze_04663 Corylus avellana HOM05D014948 ORTHO05D000034 3.5e-12 75.5 118 37.3
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-11 72.4 132 34.8
CiPaw.05G010700 Carya illinoinensis HOM05D000004 ORTHO05D000034 3.9e-11 72.0 133 33.8
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.6e-10 67.4 122 34.4
ECA236G0153 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.4e-08 62.8 122 32.0
PGSC0003DMG400046383 Solanum tuberosum HOM05D000004 ORTHO05D003926 6.8e-08 61.2 66 47.0
ATR0885G001 Amborella trichopoda HOM05D000004 ORTHO05D000034 1.5e-07 60.1 122 35.2
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.5e-07 60.1 129 31.0
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.5e-07 60.1 129 31.0
Sopen07g005880 Solanum pennellii HOM05D000004 ORTHO05D003926 1.5e-07 60.1 67 41.8
PGSC0003DMG400037751 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.0e-07 59.7 50 50.0
THA.LOC104822554 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 2.0e-07 59.7 118 33.1
Haze_19950 Corylus avellana HOM05D014948 ORTHO05D000034 3.4e-07 58.9 70 44.3
PGSC0003DMG400035219 Solanum tuberosum HOM05D000004 ORTHO05D003926 3.4e-07 58.9 66 45.5
THA.LOC109116233 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 3.4e-07 58.9 118 33.1
CANSAT25G3752 Cannabis sativa HOM05D000004 ORTHO05D000002 4.4e-07 58.5 135 31.9
PGSC0003DMG400040814 Solanum tuberosum HOM05D000004 ORTHO05D000034 4.4e-07 58.5 47 48.9
Sopen12g024640 Solanum pennellii HOM05D013164 ORTHO05D003926 5.8e-07 58.2 63 44.4
PGSC0003DMG400034341 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.3e-06 57.0 64 42.2
Sopen10g009240 Solanum pennellii HOM05D000004 ORTHO05D003926 1.7e-06 56.6 46 47.8
Sopen12g025570 Solanum pennellii HOM05D000004 ORTHO05D000034 1.7e-06 56.6 60 41.7
PGSC0003DMG400034641 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.7e-06 56.6 46 50.0
Sopen12g026600 Solanum pennellii HOM05D000004 ORTHO05D000034 2.2e-06 56.2 51 51.0
PGSC0003DMG400037232 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.2e-06 56.2 66 40.9
PGSC0003DMG400044844 Solanum tuberosum HOM05D000004 ORTHO05D003926 2.2e-06 56.2 64 43.8
CiPaw.12G010400 Carya illinoinensis HOM05D000004 ORTHO05D000224 2.9e-06 55.8 135 30.4
THA.LOC104798887 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.9e-06 55.8 118 30.5
Sopen03g026420 Solanum pennellii HOM05D000004 ORTHO05D000034 3.8e-06 55.5 76 40.8
PGSC0003DMG400038294 Solanum tuberosum HOM05D007862 ORTHO05D003926 3.8e-06 55.5 41 53.7
THA.LOC104805005 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 3.8e-06 55.5 134 29.1
THA.LOC104822870 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.8e-06 55.5 134 28.4
Sopen08g007000 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-06 55.1 51 47.1
Sopen10g006170 Solanum pennellii HOM05D000004 ORTHO05D000034 4.9e-06 55.1 51 49.0
Sopen03g020990 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-06 54.7 38 55.3
CANSAT64G2084 Cannabis sativa HOM05D000004 ORTHO05D000002 8.4e-06 54.3 82 39.0
Manes.05G086320 Manihot esculenta HOM05D013164 ORTHO05D013587 8.4e-06 54.3 38 55.3
Manes.07G091751 Manihot esculenta HOM05D013164 ORTHO05D013587 8.4e-06 54.3 38 55.3
Manes.14G173833 Manihot esculenta HOM05D013164 ORTHO05D013587 8.4e-06 54.3 38 55.3
Manes.S022953 Manihot esculenta HOM05D013164 ORTHO05D013587 8.4e-06 54.3 38 55.3
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.4e-06 54.3 117 24.8


User provided reference genes

Program Settings