Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.1e-57 226.9 161 100.0
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.1e-57 226.9 161 100.0
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.2e-30 137.1 161 65.8
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 5.0e-29 131.7 163 65.6
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 3.6e-27 125.6 156 62.8
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 1.3e-26 123.6 160 63.1
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.9e-25 119.8 163 55.8
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 4.1e-23 112.1 160 53.1
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 6.9e-23 111.3 158 53.2
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 7.7e-22 107.8 160 63.1
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.3e-21 107.1 160 56.9
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 5.0e-21 105.1 149 67.8
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 6.5e-21 104.8 165 58.2
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 1.4e-20 103.6 156 59.6
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 4.2e-20 102.1 159 56.6
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.6e-19 100.1 159 52.2
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 7.9e-19 97.8 160 47.5
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.8e-18 96.7 146 59.6
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.9e-18 95.5 162 48.1
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.9e-18 95.5 162 47.5
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 1.1e-17 94.0 161 54.7
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.1e-17 94.0 150 54.7
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.1e-17 94.0 155 46.5
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.1e-17 94.0 154 42.9
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.0e-17 93.2 146 59.6
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 5.7e-17 91.7 152 57.9
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.2e-16 89.7 160 45.6
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 8.2e-16 87.8 139 58.3
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 8.2e-16 87.8 154 51.9
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.1e-15 87.4 159 49.7
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 1.4e-15 87.0 156 55.1
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.4e-15 87.0 142 43.7
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.8e-15 86.7 152 52.6
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 2.4e-15 86.3 163 53.4
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.1e-15 85.9 159 49.1
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 4.1e-15 85.5 145 51.7
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 9.1e-15 84.3 111 63.1
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.0e-14 83.2 148 38.5
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 2.6e-14 82.8 157 54.1
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 3.4e-14 82.4 148 45.9
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 5.9e-14 81.6 159 48.4
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.0e-13 80.9 148 43.2
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 1.0e-13 80.9 157 36.3
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 1.3e-13 80.5 168 49.4
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.7e-13 80.1 156 53.8
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 2.2e-13 79.7 160 42.5
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-13 79.3 154 51.9
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 2.9e-13 79.3 169 42.6
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 3.8e-13 79.0 155 52.9
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 6.5e-13 78.2 151 45.7
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 1.4e-12 77.0 156 48.7
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 7.2e-12 74.7 153 51.0
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.2e-11 73.9 163 48.5
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 2.1e-11 73.2 152 48.7
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 2.1e-11 73.2 146 49.3
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 3.6e-11 72.4 160 39.4
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 3.6e-11 72.4 157 52.2
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 6.1e-11 71.6 152 48.7
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 1.4e-10 70.5 150 45.3
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.4e-10 70.5 165 45.5
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 1.8e-10 70.1 162 50.0
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 3.9e-10 68.9 162 37.0
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 5.2e-10 68.6 146 52.1
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 5.2e-10 68.6 138 54.3
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 8.8e-10 67.8 155 43.9
Migut.H02240 Erythranthe guttata HOM05D008046 ORTHO05D004477 1.5e-09 67.0 155 45.2
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 3.3e-09 65.9 162 47.5
PGSC0003DMG400017769 Solanum tuberosum HOM05D059644 ORTHO05D004477 7.4e-09 64.7 141 51.1
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 9.7e-09 64.3 153 37.9
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 1.3e-08 63.9 152 46.7
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 1.3e-08 63.9 154 48.1
Sed0027320 Sechium edule HOM05D026294 ORTHO05D004477 1.7e-08 63.5 146 45.9
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 2.8e-08 62.8 167 38.9
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 3.7e-08 62.4 156 34.0
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 3.7e-08 62.4 156 32.7
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 6.3e-08 61.6 172 43.6
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 6.3e-08 61.6 147 41.5
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 8.2e-08 61.2 151 31.1
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 8.2e-08 61.2 172 42.4
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 8.2e-08 61.2 172 42.4
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 1.1e-07 60.8 145 50.3
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.1e-07 60.8 172 42.4
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.4e-07 60.5 139 37.4
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 1.4e-07 60.5 115 40.0
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 1.8e-07 60.1 147 55.1
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 1.8e-07 60.1 172 43.0
Sopen04g029650 Solanum pennellii HOM05D010872 ORTHO05D013672 2.4e-07 59.7 151 59.6
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 3.1e-07 59.3 36 75.0
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 7.0e-07 58.2 142 28.9
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 7.0e-07 58.2 147 34.7
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 9.1e-07 57.8 155 32.3
CsaV3_3G047680 Cucumis sativus L. HOM05D026294 ORTHO05D004477 1.2e-06 57.4 152 46.1
CDE03G0262 Ceratophyllum demersum HOM05D001201 ORTHO05D004477 1.6e-06 57.0 38 65.8
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 2.0e-06 56.6 157 33.8
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 2.0e-06 56.6 39 64.1
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 2.6e-06 56.2 167 46.1
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 2.6e-06 56.2 151 29.8
Gohir.A06G033600 Gossypium hirsutum HOM05D037684 ORTHO05D004477 2.6e-06 56.2 33 78.8
Gohir.D06G034500 Gossypium hirsutum HOM05D037684 ORTHO05D004477 2.6e-06 56.2 33 78.8
Gorai.010G038000 Gossypium raimondii HOM05D037684 ORTHO05D004477 2.6e-06 56.2 33 78.8
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 2.6e-06 56.2 175 44.6
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 2.6e-06 56.2 149 32.9
Sp5g27330 Schrenkiella parvula HOM05D009138 ORTHO05D011294 2.6e-06 56.2 91 63.7
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 2.6e-06 56.2 27 88.9
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 3.5e-06 55.8 161 44.1
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 3.5e-06 55.8 165 30.9
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 3.5e-06 55.8 147 33.3
Sp1g19950 Schrenkiella parvula HOM05D009138 ORTHO05D011294 3.5e-06 55.8 29 79.3
BcaB07g32257 Brassica carinata HOM05D000076 ORTHO05D002730 4.5e-06 55.5 26 88.5
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 4.5e-06 55.5 149 36.9
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 4.5e-06 55.5 34 73.5
AT1G22470 Arabidopsis thaliana HOM05D009138 ORTHO05D011294 5.9e-06 55.1 27 85.2
Carub.0001s2200 Capsella rubella HOM05D009138 ORTHO05D011294 5.9e-06 55.1 27 85.2
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 5.9e-06 55.1 151 30.5
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 5.9e-06 55.1 149 30.9
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 7.7e-06 54.7 141 46.1


User provided reference genes

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