Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_18092 Corylus avellana HOM05D000021 ORTHO05D000010 1.8e-59 233.8 118 100.0
Haze_18096 Corylus avellana HOM05D000021 ORTHO05D000010 1.4e-22 111.3 98 67.3
QL02p002923 Quercus lobata HOM05D000021 ORTHO05D000010 2.3e-22 110.5 123 58.5
QL02p003134 Quercus lobata HOM05D000021 ORTHO05D000010 2.3e-22 110.5 123 58.5
CiPaw.15G049000 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.2e-18 98.2 116 56.9
QL02p003154 Quercus lobata HOM05D000021 ORTHO05D000010 2.0e-18 97.4 123 55.3
CSS0037605 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.1e-16 91.7 130 51.5
QL03p022844 Quercus lobata HOM05D000021 ORTHO05D000010 1.9e-16 90.9 121 52.9
QL02p002998 Quercus lobata HOM05D000021 ORTHO05D000010 7.2e-16 89.0 121 51.2
Actinidia22668 Actinidia chinensis HOM05D000021 ORTHO05D000010 2.3e-14 84.0 131 46.6
Actinidia10174 Actinidia chinensis HOM05D000021 ORTHO05D000010 5.2e-14 82.8 121 47.9
Dinv35910 Davidia involucrata HOM05D000021 ORTHO05D000010 1.2e-13 81.6 120 47.5
vmacro21470 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 7.5e-13 79.0 121 43.8
Gorai.002G131000 Gossypium raimondii HOM05D000021 ORTHO05D000010 1.1e-11 75.1 119 42.9
Rhsim06G0058200 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.1e-11 75.1 115 43.5
Thecc.08G094300 Theobroma cacao HOM05D000021 ORTHO05D000010 1.1e-11 75.1 115 49.6
CAN.G660.19 Capsicum annuum HOM05D000021 ORTHO05D000010 1.4e-11 74.7 125 39.2
MELO3C010825.2 Cucumis melo HOM05D000021 ORTHO05D000010 9.1e-11 72.0 115 42.6
FAN21G1122 Fragaria x ananassa HOM05D000021 ORTHO05D000010 9.1e-11 72.0 124 41.1
Peaxi162Scf00683g00460 Petunia axillaris HOM05D000021 ORTHO05D000010 9.1e-11 72.0 108 41.7
vmacro21467 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 9.1e-11 72.0 89 49.4
Prupe.1G427800 Prunus persica HOM05D000021 ORTHO05D000010 1.2e-10 71.6 112 47.3
ClCG08G016290 Citrullus lanatus HOM05D000021 ORTHO05D000010 2.0e-10 70.9 99 45.5
COL.COLO4_28564 Corchorus olitorius HOM05D000021 ORTHO05D000028 2.7e-10 70.5 83 54.2
vmacro21469 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 3.5e-10 70.1 112 43.8
CsaV3_2G026320 Cucumis sativus L. HOM05D000021 ORTHO05D000010 4.5e-10 69.7 115 42.6
CiPaw.15G048800 Carya illinoinensis HOM05D000021 ORTHO05D000010 1.0e-09 68.6 104 48.1
Dinv39254 Davidia involucrata HOM05D000021 ORTHO05D000010 1.0e-09 68.6 103 48.5
Rhsim06G0058300 Rhododendron simsii HOM05D000021 ORTHO05D000010 1.7e-09 67.8 84 48.8
Hma1.2p1_0240F.1_g100100 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 2.9e-09 67.0 110 43.6
QL11p032548 Quercus lobata HOM05D000021 ORTHO05D000010 6.5e-09 65.9 97 46.4
Gohir.D01G108800 Gossypium hirsutum HOM05D000021 ORTHO05D000010 1.1e-08 65.1 107 42.1
MD15G1074900 Malus domestica HOM05D000021 ORTHO05D000010 1.5e-08 64.7 112 46.4
Manes.04G008600 Manihot esculenta HOM05D000021 ORTHO05D000010 1.9e-08 64.3 106 42.5
QL01p017658 Quercus lobata HOM05D000021 ORTHO05D000010 2.5e-08 63.9 97 44.3
QL02p097209 Quercus lobata HOM05D000021 ORTHO05D000010 2.5e-08 63.9 128 39.1
Lj4C66T10 Lonicera japonica HOM05D000021 ORTHO05D000010 3.2e-08 63.5 85 45.9
Lj3C776G0 Lonicera japonica HOM05D000021 ORTHO05D000010 4.2e-08 63.2 77 49.4
QL02p086393 Quercus lobata HOM05D000021 ORTHO05D000010 4.2e-08 63.2 97 43.3
Gorai.002G133000 Gossypium raimondii HOM05D000021 ORTHO05D000010 5.5e-08 62.8 107 41.1
DCAR_028142 Daucus carota HOM05D000021 ORTHO05D000010 1.2e-07 61.6 103 38.8
Manes.11G156900 Manihot esculenta HOM05D000021 ORTHO05D000010 1.2e-07 61.6 95 45.3
Sabra05G0038700 Salix brachista HOM05D000021 ORTHO05D000010 1.2e-07 61.6 89 41.6
DCAR_028141 Daucus carota HOM05D000021 ORTHO05D000010 1.6e-07 61.2 103 38.8
RcHm_v2.0_Chr4g0403231 Rosa chinensis HOM05D000021 ORTHO05D000010 1.6e-07 61.2 112 34.8
THA.LOC104799793 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 1.6e-07 61.2 119 37.0
TPR.G6181 Trifolium pratense HOM05D000021 ORTHO05D000010 1.6e-07 61.2 128 38.3
Glyma.08G128900 Glycine max HOM05D000021 ORTHO05D000010 2.1e-07 60.8 88 44.3
Lj3P759T6 Lonicera japonica HOM05D000021 ORTHO05D000010 2.1e-07 60.8 76 50.0
EL10Ac3g07264 Beta vulgaris HOM05D000021 ORTHO05D000010 3.6e-07 60.1 92 43.5
Ciclev10014130m.g Citrus clementina HOM05D000021 ORTHO05D000010 3.6e-07 60.1 119 38.7
Haze_23909 Corylus avellana HOM05D000021 ORTHO05D000010 3.6e-07 60.1 101 42.6
Migut.N02758 Erythranthe guttata HOM05D000021 ORTHO05D000010 3.6e-07 60.1 81 45.7
Cc00_g13190 Coffea canephora HOM05D000021 ORTHO05D000010 4.7e-07 59.7 113 37.2
Cc00_g24400 Coffea canephora HOM05D000021 ORTHO05D000010 4.7e-07 59.7 98 34.7
QL02p022177 Quercus lobata HOM05D000021 ORTHO05D000010 4.7e-07 59.7 93 43.0
CiPaw.10G102200 Carya illinoinensis HOM05D000021 ORTHO05D000010 6.1e-07 59.3 116 33.6
CsaV3_2G026330 Cucumis sativus L. HOM05D000021 ORTHO05D000010 6.1e-07 59.3 116 39.7
Glyma.08G128800 Glycine max HOM05D000021 ORTHO05D000010 6.1e-07 59.3 88 43.2
Medtr8g089200 Medicago truncatula HOM05D000021 ORTHO05D000010 6.1e-07 59.3 124 38.7
Psat1g195840 Pisum sativum HOM05D000021 ORTHO05D000010 6.1e-07 59.3 115 38.3
CiPaw.15G049100 Carya illinoinensis HOM05D000021 ORTHO05D000010 8.0e-07 58.9 106 42.5
Haze_21579 Corylus avellana HOM05D000021 ORTHO05D000010 8.0e-07 58.9 94 41.5
ECA232G0471 Erigeron canadensis HOM05D000021 ORTHO05D000010 8.0e-07 58.9 99 41.4
FvH4_1g13780 Fragaria vesca HOM05D000021 ORTHO05D000010 8.0e-07 58.9 114 29.8
FvH4_5g08280 Fragaria vesca HOM05D000021 ORTHO05D000010 8.0e-07 58.9 114 35.1
Lsat_1_v5_gn_4_130161 Lactuca sativa HOM05D000021 ORTHO05D000010 1.0e-06 58.5 116 36.2
Migut.O00750 Erythranthe guttata HOM05D000021 ORTHO05D000010 1.4e-06 58.2 84 44.0
TPR.G6281 Trifolium pratense HOM05D000021 ORTHO05D000010 1.4e-06 58.2 134 35.8
ECA232G0354 Erigeron canadensis HOM05D000021 ORTHO05D000010 1.8e-06 57.8 99 41.4
Oeu006879.1 Olea europaea HOM05D000021 ORTHO05D000010 1.8e-06 57.8 97 41.2
Lsat_1_v5_gn_4_130100 Lactuca sativa HOM05D000021 ORTHO05D000010 2.3e-06 57.4 112 38.4
Medtr8g089210 Medicago truncatula HOM05D000021 ORTHO05D000010 2.3e-06 57.4 122 38.5
Nn1g09086 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.3e-06 57.4 82 41.5
Sed0017576 Sechium edule HOM05D000021 ORTHO05D000010 2.3e-06 57.4 101 40.6
Gohir.D11G169300 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.0e-06 57.0 109 35.8
RcHm_v2.0_Chr2g0113621 Rosa chinensis HOM05D000021 ORTHO05D000010 3.0e-06 57.0 92 33.7
GSVIVG01009394001 Vitis vinifera HOM05D000021 ORTHO05D000010 3.0e-06 57.0 83 43.4
Aa31LG4G14490 Aethionema arabicum HOM05D000021 ORTHO05D000010 4.0e-06 56.6 93 39.8
Duzib093G0487 Durio zibethinus HOM05D000021 ORTHO05D000010 4.0e-06 56.6 98 43.9
Migut.N02757 Erythranthe guttata HOM05D000021 ORTHO05D000010 4.0e-06 56.6 82 43.9
QL02p097306 Quercus lobata HOM05D000021 ORTHO05D000010 4.0e-06 56.6 90 42.2
FAN18G2237 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.2e-06 56.2 115 33.9
QL02p097113 Quercus lobata HOM05D000021 ORTHO05D000010 5.2e-06 56.2 87 42.5
BcaC01g06522 Brassica carinata HOM05D000021 ORTHO05D000010 6.8e-06 55.8 99 36.4
Cc02_g15270 Coffea canephora HOM05D000021 ORTHO05D000010 6.8e-06 55.8 124 33.9
Manes.15G107167 Manihot esculenta HOM05D000021 ORTHO05D000010 6.8e-06 55.8 114 36.0
Potri.004G060100 Populus trichocarpa HOM05D000021 ORTHO05D000010 6.8e-06 55.8 79 46.8
RcHm_v2.0_Chr5g0066001 Rosa chinensis HOM05D000021 ORTHO05D000010 6.8e-06 55.8 111 41.4
Actinidia26305 Actinidia chinensis HOM05D000021 ORTHO05D000010 8.8e-06 55.5 108 35.2
Hma1.2p1_1493F.1_g286810 Hydrangea macrophylla HOM05D000021 ORTHO05D000010 8.8e-06 55.5 105 35.2


User provided reference genes

Program Settings