Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 0.0e+00 1465.7 773 100.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 0.0e+00 1328.9 842 86.3
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 3.0e-233 812.4 947 54.3
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.3e-196 689.9 1111 44.7
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 5.3e-137 492.7 819 41.5
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 7.4e-131 472.2 781 43.5
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.6e-123 447.2 693 44.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.7e-117 427.2 808 40.2
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-113 415.2 824 38.6
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 5.7e-107 392.9 813 38.3
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 4.8e-106 389.8 774 37.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 8.3e-106 389.0 779 38.0
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 8.3e-106 389.0 779 37.9
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.1e-105 388.7 808 38.5
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.6e-104 384.8 780 36.9
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 1.7e-103 381.3 922 34.1
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 6.6e-103 379.4 915 34.5
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.5e-102 378.3 807 37.8
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.2e-102 376.7 806 37.8
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 4.7e-101 373.2 950 33.8
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.0e-101 372.5 807 37.4
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 1.6e-96 358.2 967 32.5
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.3e-95 355.1 953 33.1
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.4e-91 340.5 889 33.1
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.7e-90 338.2 890 33.5
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 9.5e-86 322.4 935 31.3
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-85 322.0 879 32.7
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 2.1e-85 321.2 1017 30.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 8.0e-85 319.3 795 33.8
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 4.4e-83 313.5 722 34.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 8.3e-82 309.3 770 34.5
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.4e-81 308.5 850 33.5
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 4.6e-80 303.5 847 32.6
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 8.6e-79 299.3 788 33.5
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 8.6e-79 299.3 1027 29.6
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 2.5e-78 297.7 728 33.4
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.2e-77 295.4 845 32.2
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.6e-77 295.0 836 31.3
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 2.4e-73 281.2 770 31.8
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 5.4e-73 280.0 821 31.7
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 2.7e-72 277.7 771 32.0
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.3e-71 274.6 903 31.5
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 9.6e-70 269.2 768 32.3
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.8e-69 267.7 833 33.0
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.1e-68 265.8 828 30.9
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.8e-68 265.0 847 32.6
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 3.1e-68 264.2 802 31.5
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.3e-66 258.8 776 33.1
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.7e-66 258.5 863 29.5
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.2e-66 258.1 735 33.6
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 4.9e-66 256.9 870 30.3
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.4e-65 255.4 794 31.0
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 2.4e-65 254.6 735 31.7
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 2.1e-64 251.5 822 28.5
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 4.6e-64 250.4 777 30.1
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 1.7e-63 248.4 923 29.3
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.9e-63 247.3 820 31.1
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.9e-62 245.0 700 32.3
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.6e-61 241.9 671 33.1
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.1e-60 239.2 312 48.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.6e-59 234.6 799 29.8
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 2.2e-58 231.5 929 28.1
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.3e-55 221.5 793 30.0
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 3.0e-55 221.1 864 29.3
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 3.9e-55 220.7 997 27.9
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 2.5e-54 218.0 867 27.7
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.6e-51 208.0 370 40.3
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.3e-50 205.7 709 29.9
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 5.4e-49 200.3 832 27.5
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 9.3e-49 199.5 801 27.5
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 8.7e-47 193.0 765 29.3
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 2.5e-46 191.4 752 28.5
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 5.6e-46 190.3 781 29.2
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.8e-45 188.0 944 26.3
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 5.3e-44 183.7 258 45.3
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.3e-44 183.7 491 33.4
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 5.3e-44 183.7 635 29.1
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 5.8e-43 180.3 795 26.9
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 7.6e-43 179.9 232 45.7
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.2e-42 178.3 806 26.3
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.1e-41 176.0 903 27.4
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 2.5e-41 174.9 749 26.4
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 5.5e-41 173.7 201 47.8
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.2e-40 172.6 496 33.3
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.1e-40 171.8 234 45.7
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.7e-40 171.4 746 27.6
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 3.0e-39 167.9 299 39.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 5.1e-39 167.2 394 33.8
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 5.1e-39 167.2 404 33.2
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 6.7e-39 166.8 830 26.0
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 2.5e-38 164.9 768 25.8
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.8e-37 161.4 753 26.7
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.8e-36 158.7 679 29.0
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 9.0e-36 156.4 842 26.4
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 1.0e-34 152.9 831 25.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 3.8e-34 151.0 818 23.8
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 3.8e-34 151.0 818 23.8
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.4e-33 149.1 819 26.4
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.4e-33 149.1 819 26.4
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.5e-33 148.3 824 24.9
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.2e-33 147.9 920 22.9
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 4.6e-32 144.1 515 29.1
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 4.8e-29 134.0 233 39.1
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 9.0e-28 129.8 946 24.0
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.5e-27 129.0 224 37.9
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 2.6e-27 128.3 251 34.7
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 4.5e-27 127.5 131 50.4
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.2e-26 125.2 920 23.4
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 7.2e-25 120.2 834 23.7
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 6.7e-23 113.6 323 30.7
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 4.8e-21 107.5 228 35.1
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.1e-20 106.3 275 31.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 4.1e-20 104.4 168 39.9
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 9.1e-20 103.2 281 28.5
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 2.6e-19 101.7 331 27.8
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 9.4e-17 93.2 528 27.1
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 3.0e-15 88.2 150 38.7
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 3.7e-13 81.3 113 44.2
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-12 79.7 134 38.8
Gohir.A03G078400 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.3e-12 77.4 346 28.6
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 1.2e-11 76.3 86 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.9e-09 68.9 135 32.6
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 8.0e-08 63.5 367 27.8
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.5e-06 59.3 116 33.6


User provided reference genes

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