Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.5e-239 832.4 423 100.0
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.6e-79 300.8 203 80.8
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.2e-75 286.6 203 75.9
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 4.1e-67 259.6 214 67.8
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.3e-65 254.6 201 67.2
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.7e-65 254.2 196 71.4
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 3.0e-65 253.4 203 67.5
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 6.6e-65 252.3 202 67.3
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 1.6e-63 247.7 206 66.5
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 5.2e-62 242.7 175 70.3
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 3.4e-61 240.0 210 63.3
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.4e-61 240.0 189 68.3
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 5.8e-61 239.2 200 66.5
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 5.8e-61 239.2 199 64.8
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 3.8e-60 236.5 205 62.4
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.1e-59 235.0 200 66.0
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 1.4e-59 234.6 210 62.9
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.4e-59 233.8 206 64.1
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.2e-58 231.5 210 62.4
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 2.1e-58 230.7 205 63.4
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 2.7e-58 230.3 199 62.8
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 4.6e-58 229.6 213 62.9
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.0e-57 228.4 204 63.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 1.7e-57 227.6 213 59.2
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 2.3e-57 227.3 214 63.6
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 3.0e-57 226.9 192 65.6
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.9e-57 226.5 198 62.1
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.9e-57 226.5 190 62.6
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.1e-56 224.9 199 62.3
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.5e-56 224.6 199 61.3
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.5e-56 224.6 213 61.5
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.5e-56 224.6 204 64.7
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 3.3e-56 223.4 195 65.6
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 5.6e-56 222.6 194 63.4
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 5.6e-56 222.6 200 64.5
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 1.2e-55 221.5 207 61.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.2e-55 221.5 207 59.9
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.6e-55 221.1 178 65.2
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 3.6e-55 219.9 206 59.7
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 4.7e-55 219.5 206 59.2
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 3.1e-54 216.9 194 61.9
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 9.0e-54 215.3 179 64.2
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.2e-53 214.9 207 59.9
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.2e-53 214.9 174 63.2
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 2.6e-53 213.8 177 66.1
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 4.4e-53 213.0 206 58.7
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 5.8e-53 212.6 202 61.4
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 9.9e-53 211.8 203 60.6
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.2e-52 210.7 206 58.3
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.2e-51 206.8 200 59.5
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 5.4e-51 206.1 201 58.7
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 1.2e-50 204.9 166 65.1
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.6e-50 204.5 212 56.1
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 2.7e-50 203.8 242 52.9
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 6.0e-50 202.6 191 59.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 7.8e-50 202.2 211 57.8
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 1.0e-49 201.8 167 65.3
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.7e-49 201.1 165 63.0
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.7e-49 201.1 212 55.2
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 2.3e-49 200.7 166 63.9
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 3.0e-49 200.3 207 56.0
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 3.9e-49 199.9 216 54.2
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 8.7e-49 198.7 177 60.5
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 8.7e-49 198.7 189 59.3
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-48 198.4 167 64.1
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.5e-48 198.0 193 58.5
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.9e-48 197.6 186 58.1
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.3e-48 196.8 207 56.5
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 4.3e-48 196.4 170 62.9
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 4.3e-48 196.4 193 58.5
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 4.3e-48 196.4 178 60.7
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 4.3e-48 196.4 178 60.7
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 7.3e-48 195.7 207 56.0
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 2.1e-47 194.1 177 59.9
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 3.6e-47 193.4 173 63.0
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 4.8e-47 193.0 167 61.1
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 8.1e-47 192.2 203 54.7
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.4e-46 190.7 166 62.7
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.2e-45 188.3 135 69.6
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 6.4e-44 182.6 180 57.8
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 1.1e-43 181.8 159 60.4
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.2e-42 178.3 216 50.0
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.1e-42 177.6 162 60.5
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 6.7e-41 172.6 180 56.7
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 9.6e-40 168.7 196 49.0
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.8e-39 167.2 159 56.6
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.9e-36 157.1 191 49.7
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 3.9e-33 146.7 168 49.4
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.7e-33 145.6 200 47.5
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.5e-32 144.1 165 50.9
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 5.6e-32 142.9 154 49.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 7.4e-32 142.5 198 47.0
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.6e-31 141.4 95 73.7
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.1e-31 141.0 130 56.9
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 9.0e-30 135.6 129 49.6
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 7.6e-29 132.5 140 50.7
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.5e-28 129.4 88 75.0
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.6e-26 123.2 152 46.1
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.7e-20 104.8 69 73.9
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 3.8e-20 103.6 72 70.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 5.0e-20 103.2 101 54.5
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.8e-17 94.7 175 36.0
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 1.3e-15 88.6 63 71.4
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 3.1e-14 84.0 70 61.4
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.1e-10 71.2 53 64.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 2.6e-08 64.3 45 68.9
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 6.3e-07 59.7 82 45.1


User provided reference genes

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