Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 2.6e-272 941.4 470 100.0
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 6.0e-160 568.2 324 90.4
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 6.3e-157 558.1 314 92.7
Cfa018190 Carpinus fangiana HOM05D012719 ORTHO05D011609 1.2e-67 261.5 161 87.6
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 3.2e-60 236.9 330 46.7
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 5.1e-58 229.6 332 47.3
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 1.1e-57 228.4 298 50.0
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 7.1e-44 182.6 331 39.0
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 1.8e-39 167.9 216 48.1
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 4.5e-38 163.3 349 36.1
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 1.0e-37 162.2 325 33.2
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 1.2e-35 155.2 340 37.4
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 1.8e-34 151.4 336 34.2
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 5.1e-34 149.8 314 32.8
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 2.2e-29 134.4 333 29.4
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 1.8e-26 124.8 333 28.2
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 2.6e-25 120.9 332 29.2
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 9.7e-25 119.0 310 29.0
PGSC0003DMG400009225 Solanum tuberosum HOM05D011855 ORTHO05D011609 1.5e-22 111.7 300 29.7
Sopen11g009360 Solanum pennellii HOM05D011855 ORTHO05D011609 4.5e-22 110.2 304 29.3
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 1.7e-21 108.2 296 31.1
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 1.9e-20 104.8 323 28.8
HPP92_004458 Vanilla planifolia HOM05D012719 ORTHO05D011609 2.3e-18 97.8 297 30.3
Cc10_g11370 Coffea canephora HOM05D011855 ORTHO05D011609 2.6e-17 94.4 273 28.9
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 1.2e-11 75.5 296 27.0
Zm00001eb168890 Zea mays HOM05D065905 ORTHO05D011609 1.4e-10 72.0 359 22.6
AagrBONN_evm.TU.Sc2ySwM_344.2059 Anthoceros agrestis HOM05D002421 ORTHO05D002560 5.2e-10 70.1 299 23.4
vmacro12524 Vaccinium macrocarpon HOM05D002421 ORTHO05D002560 8.8e-10 69.3 327 24.5
Os11g0198200 Oryza sativa ssp. japonica HOM05D065905 ORTHO05D011609 1.5e-09 68.6 342 22.2
Lj7A306T34 Lonicera japonica HOM05D002421 ORTHO05D002560 4.4e-09 67.0 322 25.5
Haze_00541 Corylus avellana HOM05D002421 ORTHO05D002560 1.3e-08 65.5 367 24.5
CSS0019481 Camellia sinensis var. sinensis HOM05D002421 ORTHO05D002560 2.8e-08 64.3 330 25.2
Actinidia23306 Actinidia chinensis HOM05D002421 ORTHO05D002560 4.8e-08 63.5 330 25.5
QL12p035461 Quercus lobata HOM05D002421 ORTHO05D002560 6.3e-08 63.2 326 24.5
PGSC0003DMG400006547 Solanum tuberosum HOM05D002421 ORTHO05D002560 6.3e-08 63.2 324 25.0
Cfa015948 Carpinus fangiana HOM05D002421 ORTHO05D002560 1.1e-07 62.4 328 24.7
Dinv27395 Davidia involucrata HOM05D002421 ORTHO05D002560 1.1e-07 62.4 326 24.5
unitig_0.g912 Utricularia gibba HOM05D002421 ORTHO05D002560 1.1e-07 62.4 322 25.2
Actinidia02590 Actinidia chinensis HOM05D002421 ORTHO05D002560 1.4e-07 62.0 326 25.5
Mapoly0005s0250 Marchantia polymorpha HOM05D002421 ORTHO05D002560 3.1e-07 60.8 271 24.7
CiPaw.06G023800 Carya illinoinensis HOM05D002421 ORTHO05D002560 4.1e-07 60.5 333 24.3
CSS0007134 Camellia sinensis var. sinensis HOM05D002421 ORTHO05D002560 1.2e-06 58.9 328 25.9
SalBow6G7077 Salvia bowleyana HOM05D002421 ORTHO05D002560 1.6e-06 58.5 323 24.1
CiPaw.05G230400 Carya illinoinensis HOM05D002421 ORTHO05D002560 3.5e-06 57.4 333 23.7
Oeu030022.1 Olea europaea HOM05D002421 ORTHO05D002560 3.5e-06 57.4 324 23.5
SEGI_01544 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 4.5e-06 57.0 323 21.7
SEGI_40655 Sequoiadendron giganteum HOM05D002421 ORTHO05D002560 4.5e-06 57.0 323 21.7
Glyma.13G085000 Glycine max HOM05D002421 ORTHO05D002560 5.9e-06 56.6 318 23.6
TPR.G23095 Trifolium pratense HOM05D002421 ORTHO05D002560 5.9e-06 56.6 322 24.8
Nitab4.5_0000695g0170 Nicotiana tabacum HOM05D002421 ORTHO05D002560 7.7e-06 56.2 328 24.1


User provided reference genes

Program Settings