Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 8.6e-88 327.0 173 100.0
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 4.2e-66 255.0 155 88.4
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 5.0e-35 151.8 159 59.1
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.7e-25 118.6 160 55.0
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 8.0e-25 117.9 155 49.0
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 3.3e-23 112.5 154 46.8
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.8e-21 106.7 159 47.2
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.4e-21 106.3 164 46.3
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 9.1e-21 104.4 157 47.8
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.3e-19 100.5 162 53.7
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.3e-19 100.5 165 44.8
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 2.2e-19 99.8 156 45.5
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 1.1e-18 97.4 163 53.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.5e-18 97.1 159 44.0
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 1.9e-18 96.7 156 46.8
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 3.2e-18 95.9 161 44.1
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 4.2e-18 95.5 170 44.7
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 9.4e-18 94.4 168 42.9
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 2.1e-17 93.2 158 44.9
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 4.7e-17 92.0 157 42.0
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 1.0e-16 90.9 166 45.8
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 1.8e-16 90.1 161 40.4
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 2.3e-16 89.7 159 44.0
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 5.2e-16 88.6 157 41.4
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 1.3e-14 84.0 121 43.8
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.3e-14 84.0 171 35.7
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.7e-14 83.6 157 38.9
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.2e-14 83.2 165 44.8
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 6.3e-14 81.6 165 43.6
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 8.3e-14 81.3 152 42.8
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 1.4e-13 80.5 165 43.6
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 1.4e-13 80.5 155 36.8
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 7.0e-13 78.2 160 40.0
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 7.0e-13 78.2 171 35.1
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 3.5e-12 75.9 159 39.0
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 4.5e-12 75.5 159 37.7
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 1.0e-11 74.3 159 37.7
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.9e-11 72.8 157 35.0
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 3.8e-11 72.4 161 37.9
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 3.8e-11 72.4 158 34.8
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 6.5e-11 71.6 155 38.7
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.1e-10 70.9 162 37.7
FAN20G0410 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.5e-10 70.5 167 36.5
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 2.5e-10 69.7 169 33.7
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 5.5e-10 68.6 169 36.7
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 5.5e-10 68.6 154 39.6
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 7.2e-10 68.2 155 32.3
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 9.4e-10 67.8 170 34.7
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 1.2e-09 67.4 158 33.5
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 2.1e-09 66.6 173 36.4
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 6.1e-09 65.1 149 38.3
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 6.1e-09 65.1 155 32.3
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.0e-08 64.3 120 39.2
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 3.0e-08 62.8 159 38.4
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 3.0e-08 62.8 166 35.5
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 3.0e-08 62.8 169 32.0
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 5.2e-08 62.0 160 38.8
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 6.8e-08 61.6 160 33.1
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 8.8e-08 61.2 156 34.6
Lj5g0011924 Lotus japonicus HOM05D007935 ORTHO05D007393 1.2e-07 60.8 157 33.8
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.5e-07 60.5 189 36.0
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 2.0e-07 60.1 152 33.6
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 2.0e-07 60.1 141 37.6
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 4.4e-07 58.9 138 35.5
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 4.4e-07 58.9 164 39.0
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 5.7e-07 58.5 161 40.4
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 7.5e-07 58.2 164 32.3
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 9.8e-07 57.8 159 34.0
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 9.8e-07 57.8 155 32.9
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 1.7e-06 57.0 169 30.8
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 1.7e-06 57.0 169 30.8
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 3.7e-06 55.8 164 29.9


User provided reference genes

Program Settings