Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 0.0e+00 1171.8 605 100.0
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 1.8e-241 839.3 633 74.1
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 6.9e-233 810.8 633 71.7
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.2e-229 800.0 633 70.8
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.6e-229 799.7 633 70.8
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 6.7e-228 794.3 633 70.3
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 1.5e-227 793.1 633 70.6
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 1.5e-227 793.1 634 69.9
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 1.9e-227 792.7 632 69.8
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.9e-227 792.7 633 70.1
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 9.6e-227 790.4 633 69.0
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 3.1e-225 785.4 634 68.9
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 4.1e-225 785.0 633 70.0
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 5.3e-225 784.6 634 69.1
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 1.2e-224 783.5 634 69.2
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 1.5e-224 783.1 634 69.1
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 2.0e-224 782.7 633 69.0
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.0e-224 782.7 633 69.0
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 4.5e-224 781.6 636 68.7
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 7.6e-224 780.8 633 69.4
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 1.0e-223 780.4 633 68.7
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 1.0e-223 780.4 633 68.4
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 1.7e-223 779.6 633 68.7
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 2.9e-223 778.9 633 69.5
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.9e-223 778.9 632 68.0
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 1.1e-222 776.9 634 69.4
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.4e-222 776.5 632 67.9
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 2.5e-222 775.8 633 68.9
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 3.2e-222 775.4 633 68.2
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 3.2e-222 775.4 632 67.7
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 3.2e-222 775.4 632 67.7
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 3.2e-222 775.4 633 68.2
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.2e-222 775.4 632 67.7
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.2e-222 775.4 632 67.7
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 4.2e-222 775.0 633 68.7
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 4.2e-222 775.0 630 68.3
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 5.5e-222 774.6 633 68.4
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 1.6e-221 773.1 633 68.7
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 2.7e-221 772.3 633 68.6
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 6.1e-221 771.2 633 68.2
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 7.9e-221 770.8 632 67.6
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 8.7e-220 767.3 633 67.1
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.9e-219 766.1 634 66.9
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 3.3e-219 765.4 670 66.0
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 4.3e-219 765.0 633 67.5
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 4.3e-219 765.0 633 67.5
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 4.3e-219 765.0 633 67.3
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 5.7e-219 764.6 633 67.1
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 9.7e-219 763.8 633 67.3
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 1.3e-218 763.5 634 66.9
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 3.7e-218 761.9 634 66.7
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 4.8e-218 761.5 637 67.2
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 6.3e-218 761.1 629 66.9
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 1.1e-217 760.4 629 66.8
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 1.4e-217 760.0 649 65.8
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 1.4e-217 760.0 649 65.8
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 2.4e-217 759.2 699 63.2
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 2.4e-217 759.2 699 63.2
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 2.6e-216 755.7 633 68.1
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 3.4e-216 755.4 668 64.5
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 2.9e-215 752.3 633 66.7
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 2.9e-215 752.3 633 66.8
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.4e-214 750.0 633 67.0
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.5e-214 748.0 632 65.8
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 9.4e-214 747.3 654 64.4
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 9.4e-214 747.3 633 67.8
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 3.6e-213 745.3 688 63.4
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 1.4e-212 743.4 604 68.5
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 6.7e-212 741.1 653 64.0
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 1.5e-211 740.0 630 65.6
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 5.7e-211 738.0 633 65.7
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 1.7e-210 736.5 630 65.4
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 2.2e-210 736.1 647 64.6
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 2.8e-210 735.7 631 65.5
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 6.3e-210 734.6 631 64.2
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 8.2e-210 734.2 645 64.5
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 2.4e-209 732.6 631 63.9
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 3.1e-209 732.3 630 65.1
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 3.1e-209 732.3 671 62.4
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 6.9e-209 731.1 630 64.6
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 1.3e-207 726.9 630 64.3
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 3.8e-207 725.3 632 64.6
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.4e-206 723.4 631 64.2
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 2.5e-206 722.6 613 65.7
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 2.5e-206 722.6 613 65.7
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.5e-206 722.6 612 67.2
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 7.2e-206 721.1 635 63.0
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 7.2e-206 721.1 631 64.2
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 2.1e-205 719.5 632 64.1
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 6.7e-204 714.5 629 63.8
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 1.5e-203 713.4 626 63.9
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 4.4e-203 711.8 632 63.4
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.7e-202 709.9 629 64.7
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 2.2e-202 709.5 622 64.8
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 4.1e-201 705.3 671 61.0
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 1.5e-198 696.8 648 62.5
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 5.5e-198 694.9 539 69.0
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 7.2e-198 694.5 633 63.5
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.2e-196 688.3 633 62.1
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 6.5e-191 671.4 603 63.5
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 5.5e-190 668.3 656 60.8
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 9.4e-190 667.5 651 61.0
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 1.2e-189 667.2 578 65.2
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.0e-187 659.8 633 59.2
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.0e-185 651.4 633 59.6
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 4.2e-182 642.1 633 59.2
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 2.8e-181 639.4 627 57.7
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 2.5e-174 616.3 650 58.3
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 6.1e-173 611.7 556 62.8
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 1.3e-167 594.0 633 55.1
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 1.2e-165 587.4 621 54.1
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 3.6e-165 585.9 588 57.0
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 5.2e-164 582.0 514 64.4
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 1.2e-163 580.9 639 52.4
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 2.6e-163 579.7 604 56.8
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 9.8e-163 577.8 621 55.4
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 7.1e-153 545.0 619 49.1
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.3e-151 540.0 574 55.1
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 3.6e-149 532.7 498 63.1
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.3e-146 524.2 565 55.9
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 5.6e-142 508.8 580 50.7
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 3.4e-139 499.6 449 62.6
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 8.7e-127 458.4 641 45.2
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 3.7e-125 453.0 487 57.7
Ca_19959_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 1.3e-117 427.9 280 81.8
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 1.3e-117 427.9 280 80.7
Glyma.03G026400 Glycine max HOM05D003420 ORTHO05D003970 2.9e-106 390.2 273 77.3
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 8.5e-106 388.7 214 90.2
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 6.1e-104 382.5 462 53.5
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 3.9e-103 379.8 234 82.1
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 8.7e-103 378.6 635 37.0
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 1.5e-102 377.9 433 52.9
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 1.8e-100 370.9 214 87.4
AUR62027528 Chenopodium quinoa HOM05D003420 ORTHO05D003970 1.7e-98 364.4 252 78.6
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 1.9e-97 360.9 279 72.0
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 4.7e-96 356.3 187 93.6
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 2.3e-95 354.0 214 82.7
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 6.7e-95 352.4 249 75.9
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 8.8e-95 352.1 385 53.0
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 1.1e-94 351.7 187 93.6
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.9e-89 334.3 440 45.0
Glyma.03G026100 Glycine max HOM05D003420 ORTHO05D003970 1.5e-86 324.7 206 81.1
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 1.1e-84 318.5 172 94.2
Haze_13387 Corylus avellana HOM05D003420 ORTHO05D003970 4.2e-81 306.6 161 97.5
SHI09126 Sapria himalayana HOM05D003420 ORTHO05D003970 1.6e-80 304.7 392 48.5
MBI02_g35948_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.0e-75 287.7 206 71.4
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.1e-73 282.0 181 77.9
RcHm_v2.0_Chr1g0335051 Rosa chinensis HOM05D003420 ORTHO05D003970 1.4e-68 265.0 140 93.6
SEGI_39176 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 9.1e-68 262.3 150 86.7
Cc00_g30250 Coffea canephora HOM05D003420 ORTHO05D003970 1.2e-64 251.9 142 88.7
CDE06G1435 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 3.6e-64 250.4 140 88.6
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 6.1e-64 249.6 166 79.5
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 1.8e-63 248.1 442 41.9
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 6.8e-55 219.5 166 74.1
SEGI_21874 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 2.0e-46 191.4 110 81.8
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 1.7e-45 188.3 607 30.8
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 2.4e-44 184.5 104 86.5
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 1.3e-42 178.7 525 28.6
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 4.0e-31 140.6 103 67.0
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 5.2e-31 140.2 604 23.3
Sc02g0003480 Simmondsia chinensis HOM05D003420 ORTHO05D003970 8.4e-29 132.9 75 85.3
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.3e-26 124.8 164 46.3
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 1.5e-25 122.1 65 92.3
Haze_13395 Corylus avellana HOM05D003420 ORTHO05D003970 4.4e-22 110.5 126 55.6
SEGI_29399 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.1e-20 105.9 109 54.1
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 1.4e-20 105.5 63 77.8
CARHR290950 Cardamine hirsuta HOM05D003420 ORTHO05D003970 4.0e-15 87.4 94 59.6
RcHm_v2.0_Chr1g0335061 Rosa chinensis HOM05D003420 ORTHO05D003970 1.4e-12 79.0 52 82.7
Actinidia22371 Actinidia chinensis HOM05D003420 ORTHO05D003970 2.3e-10 71.6 94 52.1


User provided reference genes

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