Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 2.7e-146 521.9 258 100.0
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 2.7e-146 521.9 258 100.0
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 3.6e-138 495.0 256 95.3
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 3.0e-137 491.9 254 94.5
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 6.7e-137 490.7 256 94.5
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.5e-136 489.6 255 93.7
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 1.5e-136 489.6 255 93.7
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 4.8e-135 484.6 256 91.8
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 7.0e-134 480.7 256 91.8
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 9.1e-134 480.3 254 91.7
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 1.7e-132 476.1 257 91.1
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.1e-131 473.4 257 90.7
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.5e-131 473.0 256 89.1
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.5e-131 472.2 256 90.2
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 3.2e-131 471.9 256 93.0
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 2.1e-130 469.2 257 89.1
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.7e-130 468.8 256 89.8
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 8.0e-130 467.2 257 89.5
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.0e-129 466.8 257 89.1
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.4e-129 466.5 257 89.5
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.4e-129 466.5 256 89.5
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 6.8e-129 464.2 255 89.0
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.2e-128 463.4 257 88.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.4e-128 461.8 257 87.9
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.4e-128 461.8 257 87.9
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 3.4e-128 461.8 257 87.9
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 5.7e-128 461.1 257 87.9
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 5.7e-128 461.1 257 88.3
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 7.5e-128 460.7 257 87.5
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 7.5e-128 460.7 257 88.3
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 87.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 86.8
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.7e-127 459.5 253 88.9
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 87.2
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 4.8e-127 458.0 257 87.2
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.4e-126 456.4 257 88.3
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 2.4e-126 455.7 257 87.2
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 3.1e-126 455.3 253 88.1
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 4.1e-126 454.9 258 86.0
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 4.1e-126 454.9 257 86.0
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 5.4e-126 454.5 257 87.2
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 5.4e-126 454.5 257 87.2
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 9.1e-126 453.8 257 86.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 9.1e-126 453.8 257 87.2
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 1.6e-125 453.0 256 85.5
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.6e-125 453.0 257 85.2
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-125 452.2 256 85.5
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-125 452.2 256 85.5
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 1.3e-124 449.9 257 85.2
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 5.0e-124 448.0 264 84.8
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.1e-123 446.8 258 85.3
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.1e-123 446.8 257 86.0
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.2e-122 443.4 254 83.9
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.2e-122 443.4 257 85.6
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.2e-122 443.4 257 85.6
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.2e-122 443.4 257 85.6
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 4.7e-122 441.4 257 85.2
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 6.1e-122 441.0 258 84.9
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 6.1e-122 441.0 258 84.9
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 8.0e-122 440.7 257 85.2
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 8.0e-122 440.7 257 85.2
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 8.0e-122 440.7 257 85.2
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 84.8
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.4e-121 439.9 257 86.0
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 4.0e-121 438.3 257 84.4
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 4.0e-121 438.3 257 84.4
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 83.3
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 84.4
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.5e-120 436.4 257 83.7
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 84.0
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 2.0e-120 436.0 257 84.0
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 3.4e-120 435.3 257 82.5
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 9.8e-120 433.7 249 84.3
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 82.9
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.7e-119 433.0 257 84.0
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.2e-119 432.6 302 73.8
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 3.7e-119 431.8 249 83.9
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 3.7e-119 431.8 257 82.5
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.1e-118 430.3 271 79.7
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 4.1e-118 428.3 257 82.9
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 5.4e-118 427.9 271 79.0
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 9.1e-118 427.2 263 80.6
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.0e-116 423.7 258 79.5
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 81.3
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.5e-115 419.1 259 78.4
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 5.5e-115 417.9 257 79.8
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 9.5e-115 417.2 230 88.3
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.2e-112 410.2 255 78.0
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.5e-112 409.8 253 79.4
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 8.3e-111 404.1 250 78.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 1.6e-109 399.8 257 77.0
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.3e-108 396.0 281 74.4
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 2.9e-108 395.6 249 77.5
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 1.2e-104 383.6 214 85.5
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 7.5e-104 380.9 257 77.0
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 2.9e-103 379.0 231 78.8
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 8.3e-103 377.5 257 76.3
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 7.8e-101 370.9 214 83.6
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.7e-100 369.8 222 82.4
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 4.1e-94 348.6 249 69.1
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.6e-93 346.7 247 69.6
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 7.8e-93 344.4 251 68.1
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 7.3e-91 337.8 250 67.6
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 7.3e-91 337.8 198 84.8
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 8.9e-89 330.9 252 66.7
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.4e-86 322.8 203 77.8
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 8.4e-79 297.7 159 91.8
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 8.4e-71 271.2 170 76.5
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.3e-68 263.8 153 84.3
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 6.2e-66 255.0 142 88.0
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 6.4e-63 245.0 132 87.9
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 1.1e-62 244.2 198 67.7
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 3.2e-62 242.7 248 48.8
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 1.3e-60 237.3 254 50.4
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 4.8e-58 228.8 130 85.4
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 7.9e-53 211.5 272 42.3
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 3.3e-51 206.1 114 87.7
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.4e-51 204.9 112 87.5
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 6.3e-50 201.8 116 77.6
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.2e-47 193.4 105 89.5
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 2.2e-47 193.4 156 62.2
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 3.2e-46 189.5 105 85.7
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-44 183.7 105 86.7
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 3.9e-44 182.6 257 45.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.1e-44 182.2 105 81.9
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 6.3e-42 175.3 104 83.7
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.5e-35 153.3 117 67.5
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 1.3e-31 141.0 91 68.1
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 4.4e-27 125.9 102 61.8
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 1.7e-26 124.0 67 89.6
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.4e-25 120.2 96 62.5
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.3e-23 114.4 59 91.5
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.1e-14 84.7 55 72.7
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.4e-12 77.8 60 68.3
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 2.4e-09 67.0 43 76.7


User provided reference genes

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