Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.0e-108 396.7 195 100.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 3.6e-106 388.3 195 97.9
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.1e-86 323.6 198 79.8
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.5e-75 286.6 195 70.3
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 7.2e-75 284.3 187 69.5
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.8e-73 279.6 197 69.0
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 8.8e-73 277.3 196 68.9
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.2e-72 276.9 193 69.4
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.6e-72 275.8 194 69.1
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 3.4e-72 275.4 173 72.3
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 9.8e-72 273.9 197 66.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.7e-71 273.1 194 68.6
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.2e-71 272.7 170 73.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 3.7e-71 271.9 170 72.9
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 8.3e-71 270.8 193 66.8
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.1e-70 270.4 183 66.7
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 1.4e-70 270.0 191 69.1
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 2.9e-68 262.3 195 66.2
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 6.6e-68 261.2 183 69.9
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 8.6e-68 260.8 193 66.3
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.1e-67 260.4 193 66.3
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.1e-67 260.4 185 67.0
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.1e-67 260.4 183 66.1
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.5e-67 260.0 194 65.5
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 1.5e-67 260.0 183 66.1
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.9e-67 259.6 191 63.4
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 3.3e-67 258.8 199 64.8
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 4.3e-67 258.5 193 63.7
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.3e-67 258.5 183 68.3
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 5.6e-67 258.1 190 64.7
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 5.6e-67 258.1 191 68.6
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 7.3e-67 257.7 190 67.4
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 9.5e-67 257.3 183 68.9
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 1.6e-66 256.5 188 62.2
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 4.7e-66 255.0 192 63.5
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.0e-65 253.8 191 61.8
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 1.0e-65 253.8 196 64.3
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.4e-65 253.4 189 66.1
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.8e-65 253.1 193 63.7
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.0e-65 252.3 194 63.4
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 3.0e-65 252.3 183 63.4
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.2e-64 250.4 183 67.8
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.5e-64 250.0 182 64.3
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 2.6e-64 249.2 195 61.0
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 2.6e-64 249.2 195 61.0
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 3.4e-64 248.8 195 61.0
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 4.4e-64 248.4 194 62.9
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 4.4e-64 248.4 161 70.8
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 4.4e-64 248.4 186 64.5
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 5.7e-64 248.1 195 61.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 7.5e-64 247.7 172 65.7
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 7.5e-64 247.7 195 61.0
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.5e-64 247.7 186 64.5
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 9.8e-64 247.3 184 63.0
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 9.8e-64 247.3 184 61.4
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 9.8e-64 247.3 184 65.2
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.3e-63 246.9 195 61.0
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.7e-63 246.5 186 63.4
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.7e-63 246.5 171 66.7
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.9e-63 245.7 188 62.8
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.9e-63 245.7 186 63.4
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.7e-63 245.4 194 59.8
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 3.7e-63 245.4 189 59.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.9e-63 245.0 196 60.2
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 4.9e-63 245.0 186 62.9
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 8.3e-63 244.2 184 63.0
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 8.3e-63 244.2 186 62.4
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.1e-62 243.8 188 64.4
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 2.4e-62 242.7 183 63.9
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 3.2e-62 242.3 184 63.0
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.2e-62 242.3 187 63.6
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 4.1e-62 241.9 163 65.6
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 4.1e-62 241.9 184 63.0
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 5.4e-62 241.5 193 60.6
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 7.0e-62 241.1 169 65.7
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.2e-61 240.4 175 65.7
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.6e-61 240.0 183 62.3
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 2.7e-61 239.2 184 63.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 3.5e-61 238.8 194 61.9
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.5e-61 238.8 183 61.7
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 4.6e-61 238.4 195 60.0
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 7.8e-61 237.7 163 64.4
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.7e-60 236.5 200 55.0
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.7e-60 236.5 195 59.5
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.7e-60 236.5 181 57.5
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.3e-60 236.1 170 61.8
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 3.9e-60 235.3 195 59.0
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 3.9e-60 235.3 195 59.0
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 3.9e-60 235.3 193 58.0
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 8.6e-60 234.2 184 61.4
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 1.9e-59 233.0 189 58.2
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 9.5e-59 230.7 160 65.6
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.6e-58 229.9 150 66.7
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.6e-58 229.9 150 66.7
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 2.1e-58 229.6 149 68.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 6.2e-58 228.0 156 66.0
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 8.0e-58 227.6 197 56.9
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.1e-57 225.7 183 59.6
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 6.8e-57 224.6 193 56.0
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.0e-56 223.0 187 57.8
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.4e-56 222.2 150 65.3
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 4.4e-56 221.9 154 66.2
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 7.5e-56 221.1 190 53.7
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.4e-54 216.1 215 52.1
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 3.6e-50 202.2 151 61.6
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.5e-48 196.8 192 54.2
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 4.4e-48 195.3 156 57.1
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 2.9e-47 192.6 159 56.0
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 4.6e-45 185.3 161 58.4
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 7.8e-45 184.5 155 56.1
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 5.1e-44 181.8 186 48.9
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.1e-43 180.6 167 51.5
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-41 173.3 158 50.6
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.8e-41 173.3 158 50.6
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 6.8e-41 171.4 126 65.1
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.4e-40 168.7 150 52.0
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 2.2e-39 166.4 112 70.5
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.5e-37 159.1 129 63.6
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 3.5e-37 159.1 120 62.5
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 7.3e-35 151.4 114 65.8
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 9.0e-33 144.4 126 57.9
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 9.9e-32 141.0 130 57.7
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 4.2e-30 135.6 70 90.0
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 5.4e-30 135.2 72 90.3
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 3.9e-28 129.0 160 39.4
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 4.2e-22 109.0 74 64.9
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 4.6e-21 105.5 72 62.5
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 6.7e-20 101.7 67 68.7
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.5e-19 100.5 145 35.2
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 2.5e-19 99.8 71 60.6
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.1e-17 94.4 90 52.2
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.4e-17 94.0 87 51.7
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.2e-13 80.9 144 28.5
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.8e-12 77.0 45 71.1
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 6.7e-12 75.1 73 53.4
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 2.5e-11 73.2 143 25.9


User provided reference genes

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