Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 4.4e-45 184.5 111 100.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 6.0e-34 147.5 111 74.8
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.3e-28 129.8 114 71.9
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.0e-25 118.6 111 68.5
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 6.2e-23 110.9 109 63.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.5e-20 100.9 90 64.4
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.9e-19 99.4 138 52.2
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 4.2e-19 98.2 140 53.6
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.3e-19 97.1 90 54.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.6e-18 96.3 89 74.2
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.1e-18 95.9 93 71.0
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.7e-18 95.5 76 65.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-17 93.6 93 58.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.3e-17 93.2 85 71.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 8.7e-17 90.5 92 59.8
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 8.7e-17 90.5 109 60.6
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.5e-16 89.7 93 55.9
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 5.7e-16 87.8 96 51.0
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.4e-16 87.4 111 50.5
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.4e-16 87.4 88 64.8
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 9.7e-16 87.0 92 54.3
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.3e-15 86.7 113 61.1
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.6e-15 86.3 71 62.0
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 3.7e-15 85.1 86 60.5
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 4.8e-15 84.7 92 67.4
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 4.8e-15 84.7 92 67.4
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.2e-15 84.0 103 60.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 8.2e-15 84.0 103 60.2
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 1.1e-14 83.6 63 68.3
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.1e-14 83.6 54 74.1
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-14 83.2 63 65.1
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-14 83.2 56 73.2
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 1.4e-14 83.2 95 60.0
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 1.8e-14 82.8 70 65.7
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.8e-14 82.8 104 59.6
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-14 82.8 118 55.9
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.4e-14 82.4 58 72.4
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.1e-14 82.0 77 61.0
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.1e-14 81.6 93 66.7
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.9e-14 80.9 53 77.4
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 9.0e-14 80.5 59 69.5
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.2e-13 80.1 63 66.7
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 2.0e-13 79.3 110 61.8
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-13 79.3 90 56.7
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.6e-13 79.0 116 48.3
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 2.6e-13 79.0 108 56.5
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.6e-13 79.0 89 65.2
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.4e-13 78.6 69 60.9
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 4.5e-13 78.2 89 52.8
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.9e-13 77.8 48 72.9
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.9e-13 77.8 134 44.8
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.6e-13 77.4 66 65.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.6e-13 77.4 48 72.9
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.0e-12 77.0 92 62.0
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-12 77.0 52 75.0
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-12 77.0 52 75.0
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.0e-12 77.0 90 61.1
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.0e-12 77.0 63 81.0
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.0e-12 77.0 48 75.0
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-12 76.6 64 65.6
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-12 76.6 60 65.0
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.7e-12 76.3 98 62.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.7e-12 76.3 86 52.3
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.2e-12 75.9 46 78.3
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 2.9e-12 75.5 93 58.1
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 2.9e-12 75.5 93 55.9
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.9e-12 75.5 111 50.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.9e-12 75.5 63 61.9
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.8e-12 75.1 64 64.1
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.0e-12 74.7 147 46.9
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.0e-12 74.7 87 49.4
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 5.0e-12 74.7 93 55.9
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 6.5e-12 74.3 88 59.1
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 6.5e-12 74.3 101 49.5
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 8.5e-12 73.9 56 62.5
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 8.5e-12 73.9 93 46.2
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-11 73.6 90 48.9
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-11 73.6 90 48.9
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-11 73.6 80 57.5
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 1.4e-11 73.2 90 56.7
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-11 72.8 84 50.0
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-11 72.8 93 61.3
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-11 72.8 74 58.1
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.5e-11 72.4 56 62.5
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.5e-11 72.4 89 60.7
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.5e-11 72.4 66 56.1
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 3.2e-11 72.0 98 50.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 3.2e-11 72.0 103 53.4
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.5e-11 71.2 93 59.1
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 5.5e-11 71.2 87 49.4
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 5.5e-11 71.2 60 58.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.5e-11 71.2 50 70.0
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.5e-11 71.2 144 45.1
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 5.5e-11 71.2 144 45.1
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.2e-11 70.9 94 50.0
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 9.4e-11 70.5 50 70.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.4e-11 70.5 118 51.7
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-10 70.1 89 47.2
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 1.2e-10 70.1 72 62.5
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.2e-10 70.1 71 52.1
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.2e-10 70.1 48 70.8
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.2e-10 70.1 48 68.8
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.6e-10 69.7 95 55.8
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.6e-10 69.7 45 73.3
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.1e-10 69.3 96 53.1
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.7e-10 68.9 56 64.3
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 2.7e-10 68.9 66 54.5
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 2.7e-10 68.9 62 61.3
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.6e-10 68.6 60 60.0
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.6e-10 68.2 45 73.3
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.1e-10 67.8 60 60.0
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 6.1e-10 67.8 101 57.4
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 7.9e-10 67.4 60 56.7
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.9e-10 67.4 93 53.8
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.9e-10 67.4 48 66.7
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.0e-09 67.0 72 56.9
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-09 67.0 48 68.8
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-09 66.6 70 55.7
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-09 66.6 136 41.2
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-09 66.6 64 56.2
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.8e-09 66.2 96 56.2
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.8e-09 66.2 114 50.0
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-09 66.2 67 58.2
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 2.3e-09 65.9 53 60.4
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.3e-09 65.9 60 58.3
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 2.3e-09 65.9 110 51.8
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.3e-09 65.9 64 56.2
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.0e-09 65.5 90 56.7
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.0e-09 65.5 90 56.7
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.0e-09 65.5 48 64.6
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 3.9e-09 65.1 111 45.9
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 6.7e-09 64.3 96 54.2
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.7e-09 64.3 94 42.6
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.7e-09 64.3 112 47.3
Manes.18G093201 Manihot esculenta HOM05D002879 ORTHO05D002930 8.8e-09 63.9 93 55.9
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.8e-09 63.9 50 64.0
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 1.1e-08 63.5 60 55.0
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.5e-08 63.2 44 72.7
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.9e-08 62.8 96 58.3
Os01g0959200 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.9e-08 62.8 80 48.8
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.5e-08 62.4 95 50.5
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 3.3e-08 62.0 93 50.5
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 3.3e-08 62.0 93 50.5
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.3e-08 62.0 51 62.7
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 3.3e-08 62.0 54 55.6
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.3e-08 61.6 61 54.1
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.3e-08 61.6 61 54.1
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.3e-08 61.6 61 54.1
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.3e-08 61.6 58 53.4
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 5.7e-08 61.2 52 61.5
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 5.7e-08 61.2 97 49.5
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 5.7e-08 61.2 73 50.7
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.7e-08 61.2 89 52.8
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 7.4e-08 60.8 102 37.3
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 1.3e-07 60.1 63 55.6
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 1.3e-07 60.1 74 62.2
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 1.3e-07 60.1 144 39.6
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 1.7e-07 59.7 99 46.5
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 1.7e-07 59.7 140 38.6
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 1.7e-07 59.7 64 54.7
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-07 59.7 48 58.3
Actinidia04757 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.2e-07 59.3 109 49.5
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.2e-07 59.3 89 57.3
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 2.2e-07 59.3 42 64.3
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.8e-07 58.9 93 50.5
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.7e-07 58.5 143 40.6
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.3e-07 57.8 61 54.1
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 6.3e-07 57.8 71 45.1
QL02p038867 Quercus lobata HOM05D002879 ORTHO05D002930 1.1e-06 57.0 92 53.3
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-06 57.0 58 55.2
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.4e-06 56.6 40 62.5
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.4e-06 56.6 55 49.1
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.8e-06 56.2 61 50.8
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-06 55.8 61 49.2
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-06 55.8 68 50.0
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 3.1e-06 55.5 82 52.4
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.1e-06 55.1 65 49.2
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 5.3e-06 54.7 74 36.5
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 5.3e-06 54.7 41 63.4
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 5.3e-06 54.7 124 41.9
CsaV3_6G002590 Cucumis sativus L. HOM05D035606 ORTHO05D002930 6.9e-06 54.3 103 47.6
RcHm_v2.0_Chr6g0274981 Rosa chinensis HOM05D002879 ORTHO05D002930 6.9e-06 54.3 93 49.5


User provided reference genes

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