Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.3e-246 855.9 422 100.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.0e-218 762.3 402 94.0
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.6e-162 575.9 408 72.5
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 1.4e-144 516.9 367 71.7
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.3e-134 483.8 408 62.0
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 1.3e-129 467.2 405 61.2
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 7.7e-122 441.4 390 59.7
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 7.7e-122 441.4 412 54.9
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.3e-121 440.7 412 54.9
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 7.2e-120 434.9 415 54.0
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 9.4e-120 434.5 411 53.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.5e-117 427.2 397 55.9
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 3.3e-117 426.0 403 55.3
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 4.4e-117 425.6 412 56.3
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 9.7e-117 424.5 394 56.6
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.7e-116 423.7 388 55.2
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.1e-115 421.0 411 54.7
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.2e-114 417.5 389 55.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 4.5e-114 415.6 405 55.3
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 3.8e-113 412.5 441 51.5
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 8.5e-113 411.4 412 54.9
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 1.4e-112 410.6 405 54.8
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 1.2e-111 407.5 392 54.6
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.6e-111 406.0 413 53.3
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 3.0e-110 402.9 427 51.8
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 3.9e-110 402.5 428 52.1
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 3.9e-110 402.5 407 55.5
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.7e-108 396.0 408 52.9
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.8e-107 393.7 386 54.4
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 7.7e-106 388.3 377 55.7
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 2.2e-105 386.7 368 54.9
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 7.2e-104 381.7 395 50.9
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 3.6e-103 379.4 401 52.6
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 3.0e-102 376.3 403 52.1
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 6.7e-102 375.2 404 49.5
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 7.5e-101 371.7 406 50.5
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 4.8e-100 369.0 396 51.0
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 2.4e-99 366.7 404 50.7
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 5.3e-99 365.5 396 50.5
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 4.0e-94 349.4 423 47.3
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 8.8e-94 348.2 409 49.1
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.3e-92 344.4 398 47.0
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 4.8e-92 342.4 408 46.6
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.6e-90 337.4 398 44.5
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.3e-89 334.3 401 49.1
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 2.3e-89 333.6 397 44.8
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 2.9e-89 333.2 310 56.1
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 3.8e-89 332.8 397 43.6
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.5e-88 330.9 399 49.4
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.9e-88 330.5 293 57.0
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.2e-87 327.8 402 46.5
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 4.0e-86 322.8 412 47.1
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 6.8e-86 322.0 384 47.1
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 5.9e-82 308.9 382 44.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.3e-81 307.8 398 43.5
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 1.7e-81 307.4 325 49.8
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.2e-79 301.2 330 51.2
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.8e-78 297.4 399 43.6
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.8e-78 297.4 366 43.4
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.3e-78 297.0 256 59.4
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 4.0e-78 296.2 392 43.4
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.2e-76 290.4 233 66.1
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 2.0e-74 283.9 281 55.9
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.0e-73 280.0 312 51.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.8e-70 270.8 397 41.6
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 4.0e-70 269.6 389 42.4
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 7.5e-69 265.4 399 40.6
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.1e-67 261.5 313 48.2
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 7.0e-67 258.8 267 51.7
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 5.1e-65 252.7 204 63.2
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 5.1e-65 252.7 384 40.1
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.2e-63 248.1 291 49.1
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 2.8e-63 246.9 395 42.0
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 3.6e-63 246.5 382 42.1
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 3.6e-63 246.5 389 39.3
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 4.7e-63 246.1 382 39.0
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 2.6e-61 240.4 388 38.7
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 5.8e-61 239.2 199 63.3
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 4.1e-59 233.0 386 38.6
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 5.4e-59 232.6 374 40.6
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.5e-56 223.8 390 41.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 9.5e-56 221.9 388 38.7
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 9.5e-56 221.9 376 39.1
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 3.6e-55 219.9 388 38.4
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 4.7e-55 219.5 386 37.8
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 6.2e-55 219.2 387 38.8
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.1e-54 216.9 387 38.5
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 4.0e-54 216.5 394 36.8
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 2.0e-53 214.2 388 38.1
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.4e-53 213.4 257 48.6
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.7e-49 201.1 403 37.5
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 5.1e-49 199.5 390 34.6
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 8.7e-49 198.7 192 52.6
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 1.4e-46 191.4 364 36.0
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.8e-38 164.5 289 37.4
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.2e-36 157.5 434 27.6
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.6e-34 149.8 135 57.8
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 3.9e-33 146.7 140 49.3
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.1e-27 128.6 95 68.4
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 2.7e-26 124.0 162 42.0
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 2.1e-23 114.4 70 74.3
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.1e-18 97.8 67 70.1
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 3.9e-17 93.6 169 39.1
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 4.3e-16 90.1 80 50.0
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 8.2e-15 85.9 76 47.4
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.7e-12 78.2 61 55.7
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.2e-11 73.6 171 31.6
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 3.6e-10 70.5 48 62.5
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.7e-09 66.2 222 26.6
Sc02g0003940 Simmondsia chinensis HOM05D006715 ORTHO05D008345 6.3e-07 59.7 94 42.6
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 1.8e-06 58.2 247 22.7


User provided reference genes

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