Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.9e-165 585.1 285 100.0
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 3.5e-110 402.1 239 81.2
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 4.5e-110 401.7 250 78.0
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 7.3e-108 394.4 252 77.0
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 2.1e-107 392.9 246 77.2
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.6e-107 392.1 251 77.3
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.0e-106 390.6 252 75.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.4e-106 390.2 249 76.7
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.3e-106 389.4 256 76.2
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 4.0e-106 388.7 249 76.3
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 6.8e-106 387.9 244 76.6
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.5e-105 386.7 249 75.9
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 4.4e-105 385.2 255 73.7
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 7.5e-105 384.4 259 74.9
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 7.5e-105 384.4 263 73.4
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.3e-104 383.6 238 78.6
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.9e-104 382.5 246 77.2
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 4.9e-104 381.7 248 75.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 4.9e-104 381.7 245 77.1
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 4.1e-103 378.6 252 75.0
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 5.4e-103 378.3 246 76.0
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 7.0e-103 377.9 249 75.1
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 9.2e-103 377.5 217 80.6
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 9.2e-103 377.5 246 75.2
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.2e-102 377.1 217 82.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 3.9e-101 372.1 260 71.2
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.0e-101 371.7 256 73.0
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 6.6e-101 371.3 253 72.3
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 8.6e-101 370.9 253 71.5
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.9e-100 369.8 245 75.5
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 5.6e-100 368.2 245 75.1
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 9.5e-100 367.5 253 73.1
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 9.5e-100 367.5 231 76.6
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 9.5e-100 367.5 253 70.4
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 8.0e-99 364.4 231 76.2
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 2.6e-97 359.4 241 72.6
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 3.4e-97 359.0 200 84.0
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.7e-96 356.7 280 66.8
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.2e-96 356.3 203 82.8
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 2.2e-96 356.3 252 71.0
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.9e-96 355.9 223 77.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 3.7e-96 355.5 205 80.5
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 4.9e-96 355.1 197 84.3
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 4.9e-96 355.1 248 73.8
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 6.4e-96 354.8 239 71.5
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 6.4e-96 354.8 221 76.0
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 8.3e-96 354.4 245 69.4
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.4e-95 353.6 197 83.2
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 2.4e-95 352.8 251 71.7
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 2.4e-95 352.8 200 81.5
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 3.2e-95 352.4 240 72.1
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 4.1e-95 352.1 252 69.4
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 4.1e-95 352.1 213 77.5
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 4.1e-95 352.1 197 83.2
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 4.1e-95 352.1 251 71.3
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 5.4e-95 351.7 225 73.8
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 7.0e-95 351.3 257 68.9
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 9.2e-95 350.9 197 82.7
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 9.2e-95 350.9 197 81.7
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.6e-94 350.1 250 70.0
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 3.5e-94 349.0 196 84.2
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 7.8e-94 347.8 194 82.5
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.3e-93 347.1 208 78.4
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 3.0e-93 345.9 230 72.2
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 6.6e-93 344.7 222 76.6
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 4.3e-92 342.0 193 82.9
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.6e-91 340.1 195 81.5
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 2.1e-91 339.7 255 66.3
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 2.8e-91 339.3 214 77.1
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 4.7e-91 338.6 196 80.6
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.8e-90 336.7 251 66.9
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 5.2e-90 335.1 212 78.8
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.5e-89 333.6 193 79.8
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.4e-89 332.4 227 67.8
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 2.2e-88 329.7 211 74.4
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 8.3e-88 327.8 202 76.2
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.4e-87 326.2 186 82.3
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.4e-87 326.2 212 73.6
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 5.4e-87 325.1 227 70.5
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 1.1e-84 317.4 183 80.9
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.1e-84 317.4 242 68.6
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 1.2e-83 313.9 233 68.2
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 6.2e-83 311.6 220 69.5
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.8e-80 302.4 211 66.8
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.4e-79 300.4 197 74.6
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.7e-77 291.2 195 68.2
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 7.3e-76 288.1 192 67.2
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 1.1e-74 284.3 252 60.3
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.4e-74 283.9 199 70.4
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.4e-74 283.1 169 79.3
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.2e-72 276.6 176 68.8
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 8.4e-72 274.6 230 58.3
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.4e-66 257.3 195 64.6
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.2e-65 254.2 172 73.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 2.9e-64 249.6 207 62.3
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 4.6e-62 242.3 147 75.5
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.9e-60 236.9 242 56.2
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.8e-58 230.3 241 55.6
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 7.1e-55 218.4 172 61.0
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 3.5e-54 216.1 198 54.0
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 8.7e-53 211.5 137 73.7
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.3e-51 207.6 234 49.6
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 9.3e-47 191.4 200 54.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 7.9e-46 188.3 123 74.8
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 6.3e-43 178.7 103 77.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 8.5e-40 168.3 149 51.0
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.1e-39 167.9 106 73.6
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 3.5e-25 119.8 71 80.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 4.5e-25 119.4 70 74.3
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.2e-22 111.3 186 39.2
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 8.5e-16 88.6 57 73.7


User provided reference genes

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