Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 4.4e-225 784.3 381 100.0
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 1.1e-196 689.9 381 88.7
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.2e-169 600.1 383 78.3
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.3e-165 585.9 375 77.1
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.0e-165 585.5 375 77.1
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.2e-158 563.5 376 74.5
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.3e-157 560.1 376 73.9
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 1.9e-156 556.2 376 72.9
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 4.3e-156 555.1 376 72.6
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 4.0e-154 548.5 369 73.4
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.2e-152 542.7 381 70.6
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 2.9e-152 542.3 377 71.4
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 3.8e-152 542.0 381 70.1
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 1.6e-150 536.6 375 71.2
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.1e-149 531.6 366 71.6
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 8.7e-149 530.8 376 69.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 8.7e-149 530.8 375 70.1
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.5e-148 530.0 376 70.5
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 4.3e-148 528.5 363 71.9
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 7.3e-148 527.7 375 71.2
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.3e-148 527.7 376 69.9
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 1.3e-147 526.9 375 69.1
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 2.8e-147 525.8 377 69.0
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 3.6e-147 525.4 375 69.9
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 6.2e-147 524.6 363 71.6
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-146 523.5 376 69.7
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 1.8e-146 523.1 374 70.3
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 2.4e-146 522.7 375 70.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.0e-146 521.9 378 69.8
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 5.3e-146 521.5 374 71.7
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 9.0e-146 520.8 375 69.3
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.5e-145 520.0 375 69.6
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 2.0e-145 519.6 365 70.4
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 4.5e-145 518.5 375 69.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 5.8e-145 518.1 375 69.3
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 7.6e-145 517.7 375 66.9
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 7.6e-145 517.7 376 68.9
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 9.9e-145 517.3 376 68.6
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 9.9e-145 517.3 375 68.8
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.3e-144 516.9 376 69.1
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 1.7e-144 516.5 374 68.4
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 2.9e-144 515.8 374 69.5
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 3.8e-144 515.4 371 70.4
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 6.4e-144 514.6 373 71.0
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.1e-143 513.8 375 68.0
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.1e-143 513.8 369 70.5
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-143 513.5 375 68.3
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 2.4e-143 512.7 376 68.6
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 3.2e-143 512.3 376 67.8
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 4.2e-143 511.9 376 69.7
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 5.4e-143 511.5 377 67.4
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 9.3e-143 510.8 375 67.7
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.6e-142 510.0 366 69.1
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 4.6e-142 508.4 377 66.3
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 6.0e-142 508.1 377 68.7
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.3e-141 506.9 377 67.1
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 3.0e-141 505.8 373 66.8
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.3e-139 500.4 365 66.0
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.8e-139 499.2 378 66.4
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 6.2e-139 498.0 380 67.6
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 1.8e-138 496.5 376 66.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 9.0e-138 494.2 385 65.2
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 9.0e-138 494.2 385 65.2
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.5e-137 493.4 384 65.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 2.0e-137 493.0 385 65.2
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 3.4e-137 492.3 371 67.1
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 7.6e-137 491.1 375 66.1
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 7.6e-137 491.1 364 67.0
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 7.6e-137 491.1 382 64.9
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 9.9e-137 490.7 371 67.1
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 2.2e-136 489.6 377 65.3
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 2.9e-136 489.2 368 66.8
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 4.9e-136 488.4 378 66.1
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.9e-135 486.5 435 59.3
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 4.2e-135 485.3 380 65.8
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.6e-134 483.4 375 64.3
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 3.5e-134 482.3 378 65.1
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 7.9e-134 481.1 371 65.2
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.3e-133 480.3 350 68.3
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.8e-133 479.9 373 64.6
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 8.7e-133 477.6 381 61.9
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 4.3e-132 475.3 381 64.8
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 5.6e-132 474.9 359 66.3
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 9.6e-132 474.2 381 61.4
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.1e-130 470.7 312 75.6
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.4e-130 469.5 331 69.8
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 3.1e-130 469.2 383 64.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 5.3e-130 468.4 371 63.9
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 2.6e-129 466.1 320 71.6
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.4e-127 460.3 378 62.4
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.4e-127 460.3 380 62.6
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 2.1e-126 456.4 375 61.9
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 6.0e-126 454.9 369 63.7
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 6.0e-126 454.9 373 61.4
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 7.9e-126 454.5 370 61.9
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 2.3e-125 453.0 377 62.1
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 5.1e-125 451.8 352 64.8
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 3.3e-124 449.1 376 59.6
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 9.7e-124 447.6 377 60.5
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 6.3e-123 444.9 375 60.0
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.0e-116 423.3 353 61.2
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.9e-111 406.8 364 58.2
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 6.7e-109 398.3 275 70.5
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 2.0e-108 396.7 283 72.4
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 3.3e-108 396.0 262 72.5
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 6.3e-107 391.7 279 65.9
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.8e-106 390.2 279 65.9
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 8.8e-101 371.3 361 56.2
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 1.8e-98 363.6 353 56.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.8e-98 363.6 332 55.4
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 8.5e-96 354.8 364 52.2
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 2.8e-91 339.7 262 64.5
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.4e-90 337.4 271 65.7
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.0e-90 335.1 273 63.0
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 9.1e-90 334.7 273 63.0
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.7e-89 333.2 272 64.3
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.8e-83 313.2 271 60.9
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.1e-82 311.2 358 47.5
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 2.0e-81 307.0 274 55.5
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 3.5e-65 253.1 209 61.2
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.9e-63 247.3 209 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 4.3e-63 246.1 203 60.1
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 5.8e-60 235.7 281 43.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.6e-54 217.6 192 57.8
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 2.2e-51 207.2 215 48.4
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 1.0e-48 198.4 210 50.5
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.0e-44 184.1 193 52.3
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 2.9e-27 127.1 81 72.8
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 5.4e-26 122.9 73 79.5
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 6.0e-17 92.8 57 68.4
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.8e-08 64.7 49 65.3


User provided reference genes

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