Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 9.8e-115 416.8 205 100.0
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 9.8e-115 416.8 205 100.0
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.3e-106 389.8 205 92.7
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.0e-83 312.8 202 77.7
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 9.0e-76 287.3 208 70.7
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 2.5e-70 269.2 209 67.5
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 9.6e-70 267.3 208 66.3
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.6e-67 259.2 209 65.6
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.2e-65 251.9 209 63.6
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 5.5e-65 251.5 219 63.9
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 1.2e-64 250.4 207 63.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 1.0e-63 247.3 208 58.7
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 5.7e-62 241.5 212 59.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 9.6e-62 240.7 205 62.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.6e-61 240.0 205 60.5
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.3e-61 238.0 210 57.6
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 6.3e-61 238.0 210 57.6
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 4.1e-60 235.3 213 57.7
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 4.1e-60 235.3 209 58.9
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.9e-60 234.6 210 56.7
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.9e-60 234.6 213 57.3
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.2e-59 233.8 213 57.3
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.0e-59 233.0 206 58.7
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.0e-59 233.0 207 60.4
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.3e-58 230.3 207 58.5
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 1.7e-58 229.9 202 57.9
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 7.2e-57 224.6 210 61.9
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.6e-56 223.4 214 57.0
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.6e-56 223.4 214 60.7
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.1e-56 223.0 201 57.7
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 8.7e-55 217.6 205 57.6
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 8.7e-55 217.6 206 58.7
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 8.7e-55 217.6 206 58.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 5.7e-54 214.9 206 58.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.3e-53 213.8 207 53.6
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 2.2e-53 213.0 208 52.4
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.7e-53 212.2 216 59.3
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 4.8e-53 211.8 216 55.1
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.4e-52 210.3 207 52.7
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.4e-52 209.5 207 53.1
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 5.3e-52 208.4 207 53.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 1.2e-51 207.2 206 53.9
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.6e-51 206.1 222 52.3
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.6e-51 206.1 216 56.5
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.6e-51 206.1 216 58.3
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 3.4e-51 205.7 202 54.5
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 4.5e-51 205.3 204 52.0
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.0e-50 204.1 212 53.3
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 3.8e-50 202.2 198 58.1
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 6.5e-50 201.4 202 52.5
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 7.2e-49 198.0 205 49.3
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 9.4e-49 197.6 205 51.2
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.2e-48 197.2 210 53.3
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.6e-48 196.8 205 48.8
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 3.6e-48 195.7 154 62.3
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 6.1e-48 194.9 203 53.2
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 7.9e-48 194.5 195 53.8
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 7.9e-48 194.5 209 53.6
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.0e-47 192.6 204 52.9
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 3.0e-47 192.6 209 51.7
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 5.1e-47 191.8 198 53.5
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.1e-46 190.7 201 49.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 3.7e-45 185.7 198 50.5
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.1e-44 184.1 228 48.7
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.4e-44 183.7 202 48.5
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.8e-44 183.3 208 51.0
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 4.1e-44 182.2 206 51.5
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.2e-43 180.6 204 48.0
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.2e-43 180.6 217 47.5
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.9e-43 178.3 194 50.0
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.3e-42 177.2 187 48.1
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 3.2e-41 172.6 204 48.0
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.3e-39 166.4 196 51.0
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.3e-39 166.4 217 47.5
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.2e-39 165.2 214 44.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.3e-38 162.5 196 49.5
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 4.4e-38 162.2 211 45.5
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 5.7e-38 161.8 184 50.0
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 7.4e-38 161.4 192 46.4
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.7e-38 161.0 208 46.2
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 4.8e-37 158.7 225 43.6
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 5.3e-36 155.2 206 46.1
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 5.3e-36 155.2 206 45.1
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.6e-35 153.7 191 48.7
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.5e-35 152.5 223 44.4
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.7e-34 150.2 191 48.7
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.7e-34 150.2 194 47.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.9e-34 149.4 192 46.9
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.9e-34 149.4 192 46.9
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 5.0e-34 148.7 192 47.4
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 8.5e-34 147.9 191 48.2
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 1.5e-33 147.1 206 43.7
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.9e-33 146.7 219 42.9
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 9.4e-33 144.4 193 45.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 1.6e-32 143.7 210 43.3
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.1e-32 143.3 210 42.4
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 2.7e-32 142.9 193 46.1
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.7e-32 142.9 170 48.2
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 6.1e-32 141.7 188 46.8
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 8.0e-32 141.4 134 53.0
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 4.0e-31 139.0 168 52.4
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.5e-30 137.1 187 46.5
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 7.5e-30 134.8 204 39.7
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 8.2e-29 131.3 149 50.3
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.1e-28 129.4 207 43.5
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 9.1e-28 127.9 210 41.4
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 9.1e-28 127.9 210 41.4
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 1.2e-27 127.5 208 40.4
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 2.7e-27 126.3 214 40.2
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 5.0e-26 122.1 207 41.5
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 6.5e-26 121.7 103 59.2
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.2e-24 117.5 158 44.9
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.5e-22 110.5 214 38.3
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 3.7e-21 105.9 183 40.4
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 2.0e-19 100.1 102 54.9
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 5.7e-14 82.0 147 41.5
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 5.7e-14 82.0 114 47.4
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 5.4e-12 75.5 186 36.0
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 3.3e-09 66.2 141 34.8
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.3e-09 66.2 228 27.6
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.6e-08 63.9 171 30.4
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.6e-08 62.8 176 30.7
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 6.1e-08 62.0 33 75.8
SalBow7G2854 Salvia bowleyana HOM05D008060 ORTHO05D003608 4.0e-07 59.3 74 48.6
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 9.8e-06 54.7 34 67.6


User provided reference genes

Program Settings