Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17507 Corylus avellana HOM05D000529 ORTHO05D000472 2.8e-80 302.0 160 100.0
Haze_17579 Corylus avellana HOM05D000529 ORTHO05D000472 1.2e-56 223.4 156 76.9
Manes.05G169600 Manihot esculenta HOM05D000529 ORTHO05D000472 5.8e-54 214.5 158 71.5
Cfa018498 Carpinus fangiana HOM05D000529 ORTHO05D000472 7.5e-54 214.2 154 73.4
Ciclev10000281m.g Citrus clementina HOM05D000529 ORTHO05D000472 7.5e-54 214.2 158 71.5
Dinv39347 Davidia involucrata HOM05D000529 ORTHO05D000472 1.4e-52 209.9 155 71.0
CSS0020808 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 5.4e-52 208.0 158 70.9
CSS0046943 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 5.4e-52 208.0 158 70.9
Dinv36002 Davidia involucrata HOM05D000529 ORTHO05D000472 5.4e-52 208.0 158 70.9
Lsat_1_v5_gn_1_19281 Lactuca sativa HOM05D000529 ORTHO05D000472 1.2e-51 206.8 156 69.9
CiPaw.15G065600 Carya illinoinensis HOM05D000529 ORTHO05D000472 1.6e-51 206.5 156 70.5
Gohir.D05G263200 Gossypium hirsutum HOM05D000529 ORTHO05D000472 1.6e-51 206.5 156 73.1
Duzib041G0187 Durio zibethinus HOM05D000529 ORTHO05D000472 2.7e-51 205.7 156 71.8
COL.COLO4_26439 Corchorus olitorius HOM05D000529 ORTHO05D000472 4.6e-51 204.9 158 70.9
Gorai.009G275000 Gossypium raimondii HOM05D000529 ORTHO05D000472 4.6e-51 204.9 156 72.4
EL10Ac1g01813 Beta vulgaris HOM05D000529 ORTHO05D000472 1.0e-50 203.8 158 67.1
Gohir.A05G199700 Gossypium hirsutum HOM05D000529 ORTHO05D000472 3.0e-50 202.2 156 70.5
Gohir.D05G202700 Gossypium hirsutum HOM05D000529 ORTHO05D000472 3.0e-50 202.2 156 70.5
Gorai.009G208600 Gossypium raimondii HOM05D000529 ORTHO05D000472 3.0e-50 202.2 156 70.5
TWI56G1471 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 5.1e-50 201.4 158 68.4
Lj4A49T79 Lonicera japonica HOM05D000529 ORTHO05D000472 1.5e-49 199.9 156 66.0
Prupe.1G389500 Prunus persica HOM05D000529 ORTHO05D000472 1.9e-49 199.5 158 67.1
Hund06330 Selenicereus undatus HOM05D000529 ORTHO05D000472 3.3e-49 198.7 163 65.6
TAR628G0230 Trochodendron aralioides HOM05D000431 ORTHO05D000472 3.3e-49 198.7 158 67.1
QL02p006227 Quercus lobata HOM05D000529 ORTHO05D000472 5.6e-49 198.0 153 64.1
FvH4_2g40720 Fragaria vesca HOM05D000529 ORTHO05D000472 7.3e-49 197.6 160 65.6
Hma1.2p1_0337F.1_g129230 Hydrangea macrophylla HOM05D000529 ORTHO05D000472 9.5e-49 197.2 158 67.1
Sc02g0006820 Simmondsia chinensis HOM05D000529 ORTHO05D000472 1.6e-48 196.4 160 64.4
Cpa.g.sc64.11 Carica papaya HOM05D000529 ORTHO05D000472 2.8e-48 195.7 158 67.7
DCAR_020939 Daucus carota HOM05D000529 ORTHO05D000472 2.8e-48 195.7 156 65.4
TWI36G0871 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 2.8e-48 195.7 158 65.2
Ah.05g178400 Amaranthus hybridus HOM05D000529 ORTHO05D000472 4.7e-48 194.9 156 64.1
RcHm_v2.0_Chr6g0299881 Rosa chinensis HOM05D000529 ORTHO05D000472 1.1e-47 193.7 158 65.2
TWI56G0719 Tripterygium wilfordii HOM05D000529 ORTHO05D000472 1.4e-47 193.4 158 63.9
FAN15G0230 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.8e-47 193.0 158 64.6
Potri.014G035700 Populus trichocarpa HOM05D000529 ORTHO05D000472 1.8e-47 193.0 156 64.1
vmacro21576 Vaccinium macrocarpon HOM05D000529 ORTHO05D000472 4.0e-47 191.8 158 63.9
ECA247G1205 Erigeron canadensis HOM05D000529 ORTHO05D000472 6.8e-47 191.0 153 65.4
VMungo0647G1042 Vigna mungo HOM05D000529 ORTHO05D000472 1.5e-46 189.9 158 63.9
Glyma.14G079600 Glycine max HOM05D000529 ORTHO05D000472 2.0e-46 189.5 158 63.9
HanXRQChr05g0129181 Helianthus annuus HOM05D000529 ORTHO05D000472 2.0e-46 189.5 154 63.6
FAN27G0934 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.6e-46 189.1 158 62.0
AUR62033886 Chenopodium quinoa HOM05D000529 ORTHO05D000472 4.4e-46 188.3 158 62.7
Glyma.17G245500 Glycine max HOM05D000529 ORTHO05D000472 7.6e-46 187.6 158 62.7
Potri.002G129300 Populus trichocarpa HOM05D000529 ORTHO05D000472 7.6e-46 187.6 156 62.2
AUR62031372 Chenopodium quinoa HOM05D000529 ORTHO05D000472 9.9e-46 187.2 151 63.6
Eucgr.F02383 Eucalyptus grandis HOM05D000529 ORTHO05D000472 1.3e-45 186.8 156 62.8
Phvul.001G018900 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.7e-45 186.4 158 63.3
Sabra14G0025500 Salix brachista HOM05D000529 ORTHO05D000472 1.7e-45 186.4 156 61.5
Lj5g0007019 Lotus japonicus HOM05D000529 ORTHO05D000472 2.2e-45 186.0 158 63.9
MD08G1042500 Malus domestica HOM05D000529 ORTHO05D000472 2.9e-45 185.7 160 61.2
TPR.G13696 Trifolium pratense HOM05D000529 ORTHO05D000472 2.9e-45 185.7 158 61.4
Actinidia15273 Actinidia chinensis HOM05D000529 ORTHO05D000472 4.9e-45 184.9 157 63.1
Ca_13313_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 6.4e-45 184.5 158 60.8
Psat6g011240 Pisum sativum HOM05D000529 ORTHO05D000472 6.4e-45 184.5 158 61.4
Rhsim06G0041900 Rhododendron simsii HOM05D000529 ORTHO05D000472 6.4e-45 184.5 158 61.4
Sabra02G0101400 Salix brachista HOM05D000529 ORTHO05D000472 1.9e-44 183.0 158 60.1
ClCG05G019540 Citrullus lanatus HOM05D000529 ORTHO05D000472 2.4e-44 182.6 153 62.1
MD08G1041800 Malus domestica HOM05D000529 ORTHO05D000472 3.2e-44 182.2 160 60.0
Sed0018592 Sechium edule HOM05D000529 ORTHO05D000472 9.2e-44 180.6 161 60.2
Cfa018573 Carpinus fangiana HOM05D000529 ORTHO05D000472 1.2e-43 180.3 107 89.7
MELO3C016725.2 Cucumis melo HOM05D000529 ORTHO05D000472 1.2e-43 180.3 153 60.8
Atru.chr13.609 Acer truncatum HOM05D000529 ORTHO05D000472 1.6e-43 179.9 160 64.4
CsaV3_4G034000 Cucumis sativus L. HOM05D000529 ORTHO05D000472 2.1e-43 179.5 153 59.5
Gorai.002G130700 Gossypium raimondii HOM05D000529 ORTHO05D000472 2.7e-43 179.1 157 61.1
Gohir.D01G106500 Gossypium hirsutum HOM05D000529 ORTHO05D000472 3.5e-43 178.7 157 61.1
Medtr1g021100 Medicago truncatula HOM05D000529 ORTHO05D000472 3.5e-43 178.7 158 62.0
Gohir.A01G118200 Gossypium hirsutum HOM05D000529 ORTHO05D000472 6.0e-43 177.9 157 61.1
HanXRQChr02g0046611 Helianthus annuus HOM05D000529 ORTHO05D000472 7.8e-43 177.6 151 60.3
Phvul.001G018800 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.7e-42 176.4 158 58.2
Nn5g29354 Nelumbo nucifera HOM05D000529 ORTHO05D000472 2.3e-42 176.0 154 60.4
Oeu033639.1 Olea europaea HOM05D000529 ORTHO05D000472 2.3e-42 176.0 159 61.6
MD08G1042400 Malus domestica HOM05D000529 ORTHO05D000472 3.9e-42 175.3 161 59.6
SGA_v2.0_scaffold217G42412 Striga asiatica HOM05D000529 ORTHO05D000472 3.9e-42 175.3 154 64.3
VMungo0647G0275 Vigna mungo HOM05D000529 ORTHO05D000472 5.1e-42 174.9 158 58.9
SalBow7G4054 Salvia bowleyana HOM05D000529 ORTHO05D000472 1.5e-41 173.3 154 62.3
arahy.Tifrunner.gnm1.ann1.3L0H24 Arachis hypogaea HOM05D000529 ORTHO05D000472 1.9e-41 172.9 158 57.6
arahy.Tifrunner.gnm1.ann1.FF44RV Arachis hypogaea HOM05D000529 ORTHO05D000472 1.9e-41 172.9 158 57.6
Glyma.14G079500 Glycine max HOM05D000529 ORTHO05D000472 2.5e-41 172.6 158 57.0
Lalb_Chr24g0399151 Lupinus albus HOM05D000529 ORTHO05D000472 2.5e-41 172.6 158 58.9
Oeu009568.1 Olea europaea HOM05D000529 ORTHO05D000472 4.3e-41 171.8 159 61.0
MSTRG.1325 Avicennia marina HOM05D000529 ORTHO05D000472 5.6e-41 171.4 154 61.7
Duzib093G1494 Durio zibethinus HOM05D000529 ORTHO05D000472 5.6e-41 171.4 156 59.6
Glyma.17G245600 Glycine max HOM05D000529 ORTHO05D000472 9.6e-41 170.6 158 56.3
AT4G33300 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 4.7e-40 168.3 156 55.8
AL7G18240 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 1.4e-39 166.8 156 55.8
Psat6g011280 Pisum sativum HOM05D000529 ORTHO05D000472 1.8e-39 166.4 159 57.2
Ca_13314_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 4.0e-39 165.2 158 53.8
MSTRG.25117 Avicennia marina HOM05D000529 ORTHO05D000472 3.4e-38 162.2 162 58.6
Actinidia22597 Actinidia chinensis HOM05D000529 ORTHO05D000472 4.4e-38 161.8 159 54.7
BcaC01g00997 Brassica carinata HOM05D000529 ORTHO05D000472 4.4e-38 161.8 156 55.1
A08p17700 Brassica napus HOM05D000529 ORTHO05D000472 4.4e-38 161.8 156 55.1
BolC3t20969H Brassica oleracea HOM05D000529 ORTHO05D000472 4.4e-38 161.8 156 55.1
BraA08t33720Z Brassica rapa HOM05D000529 ORTHO05D000472 4.4e-38 161.8 156 55.1
Nn6g32096 Nelumbo nucifera HOM05D000529 ORTHO05D000472 4.4e-38 161.8 149 59.7
Thhalv10024421m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 5.8e-38 161.4 156 54.5
BcaB03g12806 Brassica carinata HOM05D000529 ORTHO05D000472 2.2e-37 159.5 156 55.1
BcaC09g52148 Brassica carinata HOM05D000529 ORTHO05D000472 3.8e-37 158.7 156 55.1
C01p05330 Brassica napus HOM05D000529 ORTHO05D000472 3.8e-37 158.7 156 55.1
BolC1t00513H Brassica oleracea HOM05D000529 ORTHO05D000472 3.8e-37 158.7 156 55.1
CAN.G371.66 Capsicum annuum HOM05D000529 ORTHO05D000472 1.4e-36 156.8 156 55.8
C03p86760 Brassica napus HOM05D000529 ORTHO05D000472 1.9e-36 156.4 160 54.4
Sp7g31030 Schrenkiella parvula HOM05D000529 ORTHO05D000472 2.4e-36 156.0 156 53.2
Aa31LG7G9260 Aethionema arabicum HOM05D000529 ORTHO05D000472 5.4e-36 154.8 156 51.3
BcaC09g52139 Brassica carinata HOM05D000529 ORTHO05D000472 9.3e-36 154.1 156 53.8
A01p04930 Brassica napus HOM05D000529 ORTHO05D000472 1.2e-35 153.7 156 53.2
BraA01t00475Z Brassica rapa HOM05D000529 ORTHO05D000472 1.2e-35 153.7 156 53.2
THA.LOC104803687 Tarenaya hassleriana HOM05D000529 ORTHO05D000472 1.6e-35 153.3 156 51.9
Aqoxy5G01761_Aqoxy5G01762 Aquilegia oxysepala HOM05D000529 ORTHO05D000472 2.7e-35 152.5 138 61.6
Solyc04g079420.3 Solanum lycopersicum HOM05D000529 ORTHO05D000472 2.7e-35 152.5 158 54.4
Sopen04g033030 Solanum pennellii HOM05D000529 ORTHO05D000472 2.7e-35 152.5 158 54.4
PGSC0003DMG400007999 Solanum tuberosum HOM05D000529 ORTHO05D000472 6.0e-35 151.4 138 58.7
PGR031G1757 Punica granatum HOM05D000529 ORTHO05D000472 1.7e-34 149.8 156 50.0
PGR031G3276 Punica granatum HOM05D000529 ORTHO05D000472 1.7e-34 149.8 156 48.1
Lj5g0004486 Lotus japonicus HOM05D000529 ORTHO05D000472 1.9e-33 146.4 158 51.3
Medtr1g021110 Medicago truncatula HOM05D000529 ORTHO05D000472 2.5e-33 146.0 159 51.6
CANSAT25G0052 Cannabis sativa HOM05D000529 ORTHO05D000472 3.3e-33 145.6 164 50.6
Carub.0007s0717 Capsella rubella HOM05D000529 ORTHO05D000472 4.3e-33 145.2 156 48.1
CARHR241370 Cardamine hirsuta HOM05D000529 ORTHO05D000472 9.6e-33 144.1 156 48.7
Psat6g011320 Pisum sativum HOM05D000529 ORTHO05D000472 3.6e-32 142.1 148 48.6
MBI16_g24703_MAGBIO Magnolia biondii HOM05D000529 ORTHO05D000472 4.0e-31 138.7 152 48.0
CARHR240480 Cardamine hirsuta HOM05D000529 ORTHO05D033773 6.9e-31 137.9 134 55.2
PGR031G2883 Punica granatum HOM05D000529 ORTHO05D000472 9.9e-30 134.0 156 44.2
AT5G04720 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 1.1e-28 130.6 155 47.1
AL6G14380 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 1.4e-28 130.2 155 48.4
A10p31440 Brassica napus HOM05D000529 ORTHO05D000472 1.2e-27 127.1 154 47.4
C09p72120 Brassica napus HOM05D000529 ORTHO05D000472 1.2e-27 127.1 156 46.8
BolC9t59956H Brassica oleracea HOM05D000529 ORTHO05D000472 1.2e-27 127.1 156 46.8
BraA10t45190Z Brassica rapa HOM05D000529 ORTHO05D000472 1.2e-27 127.1 156 46.8
C01p06470 Brassica napus HOM05D000529 ORTHO05D000472 1.6e-27 126.7 132 53.8
AT3G26470 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 2.7e-27 125.9 133 52.6
AL7G19240 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 6.0e-27 124.8 133 51.9
BolC1t00641H Brassica oleracea HOM05D000529 ORTHO05D000472 7.9e-27 124.4 132 53.0
Carub.0006s0361 Capsella rubella HOM05D000529 ORTHO05D000472 1.8e-26 123.2 155 45.8
Aa31LG11G5560 Aethionema arabicum HOM05D000529 ORTHO05D000472 5.1e-26 121.7 153 45.1
Sp6g38100 Schrenkiella parvula HOM05D000529 ORTHO05D000472 1.1e-25 120.6 154 44.8
CARHR208570 Cardamine hirsuta HOM05D000529 ORTHO05D000472 1.9e-25 119.8 155 43.9
Thhalv10012720m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 1.9e-25 119.8 154 44.2
BcaC06g32180 Brassica carinata HOM05D000529 ORTHO05D000472 1.2e-22 110.5 117 52.1
BcaB05g21752 Brassica carinata HOM05D000529 ORTHO05D000472 4.9e-21 105.1 152 40.1
Peaxi162Scf01092g00129 Petunia axillaris HOM05D000529 ORTHO05D000472 3.2e-20 102.4 158 44.3
CARHR175210 Cardamine hirsuta HOM05D000005 ORTHO05D012152 9.3e-20 100.9 148 39.9
CARHR176930 Cardamine hirsuta HOM05D000529 ORTHO05D000472 1.2e-19 100.5 128 41.4
BcaB03g13136 Brassica carinata HOM05D000529 ORTHO05D000472 3.9e-18 95.5 153 39.9
AL1G47950 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 1.1e-17 94.0 140 43.6
BcaB05g21751 Brassica carinata HOM05D000529 ORTHO05D000472 1.9e-17 93.2 146 39.0
arahy.Tifrunner.gnm1.ann1.CDD4S1 Arachis hypogaea HOM05D000529 ORTHO05D000472 2.5e-17 92.8 82 63.4
arahy.Tifrunner.gnm1.ann1.EUC3GX Arachis hypogaea HOM05D000529 ORTHO05D000472 2.5e-17 92.8 82 63.4
C02p02030 Brassica napus HOM05D000529 ORTHO05D000472 4.3e-17 92.0 146 37.0
BolC2t06160H Brassica oleracea HOM05D000529 ORTHO05D000472 4.3e-17 92.0 146 37.0
Carub.0008s0668 Capsella rubella HOM05D000529 ORTHO05D000472 4.3e-17 92.0 147 39.5
Carub.0008s0669 Capsella rubella HOM05D000529 ORTHO05D000472 4.3e-17 92.0 147 39.5
AT1G33560 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 2.1e-16 89.7 142 43.7
Carub.0001s3174 Capsella rubella HOM05D000529 ORTHO05D000472 8.2e-16 87.8 149 39.6
Migut.M00554 Erythranthe guttata HOM05D000529 ORTHO05D000472 2.0e-14 83.2 99 48.5
Cc10_g03810 Coffea canephora HOM05D000529 ORTHO05D000472 1.0e-13 80.9 55 65.5
CARHR033000 Cardamine hirsuta HOM05D000529 ORTHO05D000472 6.5e-13 78.2 97 47.4
arahy.Tifrunner.gnm1.ann1.MR8NY8 Arachis hypogaea HOM05D000529 ORTHO05D000472 5.5e-12 75.1 59 62.7
arahy.Tifrunner.gnm1.ann1.NSA2XE Arachis hypogaea HOM05D000529 ORTHO05D000472 5.5e-12 75.1 59 62.7
Zm00001eb134970 Zea mays HOM05D000529 ORTHO05D000472 3.5e-11 72.4 139 32.4
Nitab4.5_0000068g0290 Nicotiana tabacum HOM05D000529 ORTHO05D000472 1.3e-10 70.5 158 38.0
Nitab4.5_0005577g0010 Nicotiana tabacum HOM05D000529 ORTHO05D000472 1.3e-10 70.5 158 38.6
Zm00001eb030390 Zea mays HOM05D000529 ORTHO05D000472 1.3e-10 70.5 133 30.8
TAR381G0813 Trochodendron aralioides HOM05D000529 ORTHO05D000472 1.9e-09 66.6 156 30.8
Lsat_1_v5_gn_4_104400 Lactuca sativa HOM05D000529 ORTHO05D000472 4.3e-09 65.5 62 53.2
Lsat_1_v5_gn_8_63821 Lactuca sativa HOM05D001092 ORTHO05D000923 1.3e-08 63.9 50 62.0
Carub.0006s2702 Capsella rubella HOM05D000083 ORTHO05D001732 1.6e-08 63.5 70 45.7
SEGI_03084 Sequoiadendron giganteum HOM05D000529 ORTHO05D000472 3.7e-08 62.4 153 29.4
DCAR_021433 Daucus carota HOM05D000529 ORTHO05D000472 6.9e-07 58.2 117 32.5
C01p05360 Brassica napus HOM05D000529 ORTHO05D000472 5.9e-06 55.1 58 50.0


User provided reference genes

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