Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 6.4e-249 863.6 431 100.0
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.5e-245 851.7 431 98.8
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 9.0e-227 790.0 431 90.7
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 4.6e-215 751.1 446 85.2
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.1e-211 740.0 434 85.7
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 5.3e-211 737.6 430 86.3
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.7e-209 732.6 431 84.5
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 4.9e-209 731.1 433 85.2
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 3.2e-208 728.4 434 83.4
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 4.2e-208 728.0 431 84.0
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 4.2e-208 728.0 431 84.0
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 1.6e-207 726.1 429 83.7
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 2.1e-207 725.7 431 83.3
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.8e-206 722.6 431 83.3
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 5.1e-206 721.1 431 84.2
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 6.7e-206 720.7 431 83.1
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.7e-206 720.7 431 85.2
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 9.7e-205 716.8 427 83.6
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.6e-204 716.1 427 83.4
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.6e-204 716.1 436 82.3
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 3.7e-204 714.9 436 82.3
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 3.1e-203 711.8 432 82.4
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 6.9e-203 710.7 434 83.2
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 2.0e-202 709.1 434 83.2
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 4.5e-202 708.0 431 82.4
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 2.9e-201 705.3 383 90.9
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 6.5e-201 704.1 434 82.0
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.5e-201 703.7 431 81.7
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 1.4e-200 703.0 431 81.7
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 1.4e-200 703.0 436 81.2
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.4e-200 703.0 426 82.9
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 4.2e-200 701.4 443 80.8
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 7.2e-200 700.7 434 82.0
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 1.6e-199 699.5 427 82.2
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 2.7e-199 698.7 436 80.7
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 7.9e-199 697.2 434 82.3
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 7.9e-199 697.2 431 81.4
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 3.0e-198 695.3 432 82.6
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 3.0e-198 695.3 431 82.6
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 3.9e-198 694.9 432 81.0
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 5.1e-198 694.5 427 81.3
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 5.1e-198 694.5 431 81.2
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 6.7e-198 694.1 432 81.2
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 8.8e-198 693.7 429 81.4
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 8.8e-198 693.7 432 82.6
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 1.5e-197 693.0 432 80.8
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 2.0e-197 692.6 432 80.8
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.0e-197 692.6 421 82.4
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 3.3e-197 691.8 455 78.5
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 3.3e-197 691.8 431 81.0
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.3e-197 691.8 431 80.7
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 4.3e-197 691.4 439 80.2
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 5.7e-197 691.0 432 80.6
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.4e-197 690.6 429 80.4
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.3e-196 689.9 436 79.8
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 1.1e-195 686.8 460 77.6
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 1.5e-194 682.9 427 80.8
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 2.0e-194 682.6 435 79.8
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.0e-193 680.2 441 79.8
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.0e-193 680.2 372 90.3
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-193 680.2 435 79.5
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.0e-193 680.2 429 79.3
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.7e-193 679.5 434 79.7
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 3.8e-193 678.3 458 77.1
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 5.0e-193 677.9 432 80.6
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 1.4e-192 676.4 412 82.8
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.4e-192 676.4 435 80.0
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 2.5e-192 675.6 417 82.3
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 3.2e-192 675.2 428 80.4
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 2.1e-191 672.5 431 79.6
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.7e-191 672.2 441 78.7
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 6.1e-191 671.0 442 77.6
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 3.9e-190 668.3 431 78.4
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.1e-189 666.8 454 77.1
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 4.4e-189 664.8 396 84.1
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.7e-188 662.9 416 81.0
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.7e-188 662.9 431 79.6
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 5.3e-187 657.9 430 78.6
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 7.7e-186 654.1 432 77.8
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 7.7e-186 654.1 431 79.1
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 2.2e-185 652.5 436 78.0
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 3.8e-185 651.7 431 78.9
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 3.8e-185 651.7 432 78.5
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.5e-185 651.0 431 78.4
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 8.5e-185 650.6 432 77.8
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.1e-184 650.2 434 78.3
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 2.5e-184 649.0 429 78.3
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.5e-184 649.0 429 78.3
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 9.4e-184 647.1 431 77.0
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.3e-182 642.5 430 76.0
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 2.0e-181 639.4 429 74.8
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 5.3e-179 631.3 416 78.1
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 5.3e-179 631.3 430 75.6
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 7.0e-179 630.9 415 78.1
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 1.0e-177 627.1 415 78.6
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.3e-177 626.7 402 79.9
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 1.3e-177 626.7 342 88.6
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 5.5e-176 621.3 436 75.2
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 3.6e-175 618.6 419 75.9
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 4.7e-175 618.2 329 91.5
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.0e-174 617.1 430 74.2
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 1.1e-171 607.1 363 81.0
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-171 606.7 440 73.2
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-171 606.7 440 73.2
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 9.1e-171 604.0 412 74.3
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.0e-170 602.8 425 72.9
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.1e-168 597.0 436 70.2
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 3.2e-168 595.5 361 79.2
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 5.5e-168 594.7 432 70.6
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 7.2e-168 594.3 382 80.1
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.8e-166 587.8 361 78.7
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 5.7e-165 584.7 361 79.5
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 9.8e-165 583.9 315 89.2
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.8e-155 553.1 365 76.2
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.5e-154 548.9 379 73.9
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 5.9e-154 548.1 371 79.5
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 5.0e-145 518.5 283 89.0
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 1.5e-144 516.9 428 63.3
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 3.6e-143 512.3 352 76.1
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.7e-143 511.9 440 60.5
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.8e-142 510.0 431 61.9
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 3.4e-141 505.8 431 61.9
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.9e-140 502.7 430 62.8
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 3.7e-140 502.3 335 78.5
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 4.1e-139 498.8 431 61.5
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.0e-137 494.2 429 61.5
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 2.3e-137 493.0 429 61.3
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 2.3e-137 493.0 429 61.3
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.8e-135 486.1 447 58.8
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.1e-134 484.2 351 74.6
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 5.2e-134 481.9 345 71.0
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 3.4e-133 479.2 345 70.4
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 3.5e-130 469.2 443 59.6
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 6.2e-127 458.4 325 71.1
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.7e-124 450.3 384 59.4
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 2.1e-119 433.3 326 70.2
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.2e-117 427.6 312 67.9
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 2.6e-117 426.4 371 57.7
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.5e-112 409.8 282 71.6
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 2.4e-107 393.3 224 87.1
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 7.9e-90 335.1 228 73.7
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 5.5e-75 285.8 193 75.6
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 7.2e-75 285.4 234 64.5
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 5.1e-73 279.3 297 55.9
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 1.9e-67 260.8 183 72.7
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 3.2e-67 260.0 201 64.2
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.8e-65 254.2 183 71.6
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 2.6e-61 240.4 276 48.2
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 6.8e-57 225.7 149 73.2
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.5e-56 224.6 179 63.7
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 5.9e-53 212.6 173 64.7
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.9e-51 207.6 338 38.8
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 1.5e-48 198.0 179 59.8
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 4.9e-47 193.0 172 61.0
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.4e-46 190.7 148 68.2
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.4e-46 190.7 100 93.0
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 2.5e-43 180.6 101 82.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 8.0e-42 175.6 104 81.7
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 2.3e-41 174.1 101 79.2
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-37 161.8 100 76.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.5e-35 154.8 77 89.6
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 2.5e-35 154.1 122 67.2
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 7.3e-35 152.5 233 37.3
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.8e-34 150.6 135 62.2
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.7e-31 141.4 76 82.9
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.7e-29 134.0 72 93.1
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 5.2e-25 119.8 182 44.5
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 3.7e-23 113.6 74 77.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.3e-20 104.4 106 54.7
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 4.4e-16 90.1 77 61.0
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 4.4e-16 90.1 77 61.0
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.8e-16 89.7 89 52.8
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 1.7e-12 78.2 49 77.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.1e-11 75.5 53 66.0
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 2.5e-11 74.3 65 64.6
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 8.1e-10 69.3 42 81.0
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 8.9e-09 65.9 105 43.8
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 3.4e-08 63.9 45 71.1


User provided reference genes

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