Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 3.1e-113 411.8 204 100.0
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 4.0e-15 85.9 114 45.6
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.2e-14 84.3 110 48.2
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 1.5e-14 84.0 96 55.2
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 2.0e-14 83.6 121 49.6
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 4.4e-14 82.4 104 51.9
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 5.7e-14 82.0 117 44.4
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 5.7e-14 82.0 119 47.9
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 7.5e-14 81.6 114 45.6
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 9.7e-14 81.3 117 48.7
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 9.7e-14 81.3 120 45.8
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 9.7e-14 81.3 119 48.7
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 1.3e-13 80.9 62 69.4
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 2.2e-13 80.1 121 44.6
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 2.8e-13 79.7 128 46.1
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 6.3e-13 78.6 114 44.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 4.1e-12 75.9 109 48.6
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 5.3e-12 75.5 115 47.8
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.2e-11 74.3 121 47.1
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.0e-11 73.6 122 48.4
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 2.0e-11 73.6 128 43.8
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 2.0e-11 73.6 113 47.8
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.7e-11 73.2 115 42.6
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 4.5e-11 72.4 50 70.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 4.5e-11 72.4 115 42.6
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 7.7e-11 71.6 92 51.1
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.0e-10 71.2 118 41.5
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.7e-10 70.5 105 47.6
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-10 70.1 116 41.4
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-10 70.1 116 41.4
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.2e-10 70.1 116 44.0
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 6.5e-10 68.6 116 43.1
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.1e-09 67.8 107 46.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 4.2e-09 65.9 56 57.1
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 5.5e-09 65.5 122 44.3
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 7.2e-09 65.1 97 48.5
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 9.4e-09 64.7 98 45.9
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 9.4e-09 64.7 49 65.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 2.1e-08 63.5 69 47.8
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 2.1e-08 63.5 122 41.0
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 2.1e-08 63.5 117 44.4
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-08 63.2 52 65.4
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.6e-08 62.8 53 64.2
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 3.6e-08 62.8 51 58.8
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.4e-07 60.8 98 44.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.4e-07 60.8 98 44.9
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 1.4e-07 60.8 40 67.5
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.8e-07 60.5 116 37.9
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 1.8e-07 60.5 67 52.2
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 4.0e-07 59.3 35 71.4
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 6.8e-07 58.5 104 43.3
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 8.8e-07 58.2 104 41.3
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 1.5e-06 57.4 46 60.9
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 3.4e-06 56.2 46 58.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 3.4e-06 56.2 45 60.0
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 3.4e-06 56.2 46 58.7
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 3.4e-06 56.2 32 75.0
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 7.5e-06 55.1 56 48.2


User provided reference genes

Program Settings