Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 3.9e-268 927.5 464 100.0
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 1.1e-243 846.3 528 83.0
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 1.2e-195 686.8 532 69.9
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 5.4e-153 545.0 526 56.1
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 9.2e-153 544.3 505 58.8
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 3.0e-151 539.3 526 56.7
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 8.6e-151 537.7 464 62.1
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 5.6e-150 535.0 482 57.5
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 6.8e-148 528.1 513 58.1
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 3.2e-145 519.2 525 55.0
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 3.3e-142 509.2 462 58.9
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 4.8e-141 505.4 455 57.6
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 2.0e-139 500.0 467 58.2
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 7.6e-139 498.0 498 53.0
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 1.6e-136 490.3 459 55.8
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 6.0e-136 488.4 495 52.5
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.8e-133 479.6 502 51.0
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 4.0e-132 475.7 491 52.1
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 5.3e-132 475.3 471 56.5
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 6.9e-132 474.9 472 52.1
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.2e-131 474.2 491 51.9
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 4.9e-130 468.8 468 54.1
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 4.9e-130 468.8 478 51.5
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 8.4e-130 468.0 478 51.3
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.3e-129 464.5 526 49.6
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 7.9e-128 461.5 479 51.1
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.0e-127 459.5 478 50.8
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 3.0e-127 459.5 478 50.4
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 8.5e-106 388.3 478 46.7
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 4.8e-93 345.9 310 58.1
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 1.3e-90 337.8 382 48.2
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.3e-82 311.2 464 39.0
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 1.6e-80 304.3 484 37.2
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 7.0e-76 288.9 500 35.8
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 1.8e-71 274.2 399 40.6
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.3e-65 252.3 236 57.6
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 9.5e-65 251.9 225 60.0
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 5.2e-63 246.1 299 46.2
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.3e-57 225.7 187 61.5
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 3.6e-56 223.4 281 45.9
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.4e-52 211.5 182 58.2
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.4e-52 210.7 182 58.8
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.6e-51 208.0 259 49.4
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.0e-50 205.3 182 57.7
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.9e-49 201.1 174 58.6
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.1e-48 195.7 179 57.5
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.6e-46 190.7 167 57.5
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 2.4e-44 184.1 240 44.2
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 5.4e-44 183.0 275 45.1
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 3.5e-43 180.3 131 61.1
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 2.3e-42 177.6 229 47.6
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.6e-42 176.0 237 41.8
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.6e-42 176.0 237 41.8
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.4e-39 168.3 181 49.7
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 8.9e-39 165.6 158 54.4
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-38 164.9 142 55.6
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.9e-38 162.2 142 54.2
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.7e-34 151.4 121 61.2
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 7.6e-30 136.0 519 26.2
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 1.4e-28 131.7 207 41.1
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.2e-27 128.6 123 55.3
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 3.5e-27 127.1 113 57.5
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 1.8e-23 114.8 179 40.8
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.0e-22 111.3 128 45.3
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.2e-19 102.1 70 62.9
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.6e-19 101.7 172 38.4
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.1e-19 101.3 75 65.3
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 2.1e-19 101.3 202 33.2
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 9.3e-12 75.9 120 40.0
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.2e-11 75.5 136 36.8
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 6.0e-11 73.2 56 64.3
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 3.9e-10 70.5 135 31.9
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 8.7e-10 69.3 127 33.1
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 9.6e-09 65.9 112 35.7
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 1.5e-06 58.5 85 35.3


User provided reference genes

Program Settings