Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 2.1e-118 429.1 220 100.0
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.3e-96 356.7 246 81.7
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 6.5e-40 168.3 225 45.8
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.1e-39 167.5 243 46.1
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 4.2e-39 165.6 150 63.3
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 2.7e-38 162.9 208 49.0
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 3.6e-38 162.5 170 54.7
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 4.7e-38 162.2 242 46.3
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 6.1e-38 161.8 226 46.0
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 8.0e-38 161.4 241 45.2
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 1.8e-37 160.2 209 46.4
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 4.0e-37 159.1 174 53.4
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 2.0e-36 156.8 250 41.6
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.0e-36 156.8 250 41.6
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 7.5e-36 154.8 217 44.7
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 1.7e-35 153.7 241 43.2
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 1.7e-35 153.7 216 44.0
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 1.7e-35 153.7 224 44.6
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 2.8e-35 152.9 217 44.7
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 2.8e-35 152.9 248 43.5
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 2.8e-35 152.9 229 45.9
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.8e-35 152.1 166 51.8
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 4.8e-35 152.1 166 51.8
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 4.8e-35 152.1 168 52.4
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 4.8e-35 152.1 227 44.1
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 4.8e-35 152.1 220 43.6
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 6.3e-35 151.8 167 51.5
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 1.8e-34 150.2 235 42.6
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 3.1e-34 149.4 220 46.8
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 4.1e-34 149.1 165 50.3
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 9.1e-34 147.9 214 41.1
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 1.6e-33 147.1 237 43.0
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 1.6e-33 147.1 209 45.0
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 2.7e-33 146.4 212 46.2
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 2.7e-33 146.4 227 42.3
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 4.5e-33 145.6 155 51.6
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 1.7e-32 143.7 235 41.7
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 2.2e-32 143.3 204 46.1
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 2.9e-32 142.9 235 40.0
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 5.0e-32 142.1 216 42.1
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 6.5e-32 141.7 218 45.9
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 8.5e-32 141.4 215 42.8
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 8.5e-32 141.4 215 42.8
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 8.5e-32 141.4 221 42.5
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 1.1e-31 141.0 210 44.3
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 1.5e-31 140.6 252 38.9
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.9e-31 140.2 161 47.8
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 2.5e-31 139.8 204 43.1
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 4.2e-31 139.0 215 42.8
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 4.2e-31 139.0 215 42.8
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 4.2e-31 139.0 198 43.9
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 5.5e-31 138.7 228 41.7
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 7.2e-31 138.3 163 46.6
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 7.2e-31 138.3 194 44.3
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 7.2e-31 138.3 161 46.6
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 7.2e-31 138.3 225 39.1
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 1.2e-30 137.5 173 48.0
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 1.2e-30 137.5 167 46.1
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 1.2e-30 137.5 163 49.7
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 1.2e-30 137.5 192 46.4
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.6e-30 137.1 211 41.2
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.6e-30 137.1 213 44.6
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.1e-30 136.7 213 40.8
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.1e-30 136.7 177 46.9
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 2.8e-30 136.3 206 40.8
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 2.8e-30 136.3 206 40.8
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 2.8e-30 136.3 165 47.3
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 2.8e-30 136.3 233 39.9
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 3.6e-30 136.0 201 43.3
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 3.6e-30 136.0 168 45.8
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.6e-30 136.0 220 41.4
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.7e-30 135.6 213 43.7
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 1.8e-29 133.7 207 41.1
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.8e-29 133.7 166 45.8
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 5.2e-29 132.1 165 46.1
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 5.2e-29 132.1 216 44.4
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 6.8e-29 131.7 205 40.0
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 6.8e-29 131.7 205 40.0
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 6.8e-29 131.7 197 44.7
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 2.0e-28 130.2 201 40.3
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 2.0e-28 130.2 201 40.3
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 3.4e-28 129.4 164 43.3
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 3.4e-28 129.4 179 43.6
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 4.4e-28 129.0 172 43.6
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 9.8e-28 127.9 209 39.7
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 2.2e-27 126.7 220 40.5
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 3.7e-27 125.9 161 47.2
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 4.9e-27 125.6 216 37.5
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 6.3e-27 125.2 223 39.0
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 1.1e-26 124.4 201 39.3
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 1.1e-26 124.4 201 39.3
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 2.4e-26 123.2 201 38.8
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 4.1e-26 122.5 205 41.5
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.1e-26 122.5 167 45.5
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 5.4e-26 122.1 173 43.9
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 5.4e-26 122.1 210 40.5
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 7.0e-26 121.7 156 46.2
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 9.2e-26 121.3 251 36.3
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 1.2e-25 120.9 169 43.2
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 2.0e-25 120.2 200 37.5
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 4.5e-25 119.0 169 42.6
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 7.8e-25 118.2 133 50.4
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.0e-24 117.9 223 37.7
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.0e-24 117.9 167 44.3
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 3.8e-24 115.9 192 43.8
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 5.0e-24 115.5 196 35.7
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 8.6e-24 114.8 173 40.5
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 8.6e-24 114.8 166 42.8
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.5e-23 114.0 125 52.0
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 3.3e-23 112.8 197 39.1
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.1e-22 110.2 223 36.3
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.1e-22 110.2 229 37.6
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 8.0e-22 108.2 150 44.7
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.0e-21 107.8 229 37.1
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 4.0e-21 105.9 157 42.0
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 8.9e-21 104.8 120 49.2
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 2.6e-20 103.2 201 33.3
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 9.8e-20 101.3 219 35.6
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 1.7e-19 100.5 184 37.0
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.4e-19 98.6 182 36.3
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.4e-19 98.6 182 36.3
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 6.4e-19 98.6 182 37.4
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 1.8e-18 97.1 212 35.4
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.2e-18 96.3 158 42.4
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 3.2e-18 96.3 181 34.8
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 1.2e-17 94.4 201 35.8
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 1.6e-17 94.0 179 36.3
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 2.7e-17 93.2 194 34.0
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 3.5e-17 92.8 218 33.5
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 4.6e-17 92.4 182 35.7
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 5.9e-17 92.0 168 35.1
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 7.8e-17 91.7 157 38.2
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 2.3e-16 90.1 168 37.5
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 2.3e-16 90.1 165 37.6
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 3.9e-16 89.4 156 38.5
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 6.6e-16 88.6 162 36.4
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 6.6e-16 88.6 226 31.4
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 6.6e-16 88.6 173 38.2
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 1.1e-15 87.8 208 32.7
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 3.3e-15 86.3 158 36.7
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 9.5e-15 84.7 161 36.0
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 9.5e-15 84.7 160 35.6
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 9.5e-15 84.7 227 32.2
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 2.1e-14 83.6 78 61.5
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 6.2e-14 82.0 151 33.1
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 1.4e-13 80.9 134 37.3
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 5.2e-13 79.0 179 35.8
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 6.8e-13 78.6 101 43.6
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 6.8e-13 78.6 93 45.2
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.2e-12 77.8 163 31.3
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 3.4e-12 76.3 134 35.8
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 1.7e-11 73.9 159 32.7
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 6.4e-11 72.0 233 30.0
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 5.4e-10 68.9 156 30.8
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 3.0e-08 63.2 167 28.7
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 3.9e-08 62.8 183 28.4
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 3.9e-08 62.8 143 31.5
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.5e-07 60.8 207 28.5
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 2.5e-07 60.1 139 31.7
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 3.3e-07 59.7 79 44.3
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 6.2e-06 55.5 103 37.9
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 8.1e-06 55.1 168 29.8


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