Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.6e-98 362.1 186 100.0
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.8e-76 288.9 191 77.5
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 8.2e-76 287.3 158 93.7
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 5.8e-74 281.2 185 75.7
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.1e-63 246.1 191 70.2
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 6.7e-62 241.1 191 68.1
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.5e-61 239.2 189 68.3
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 4.8e-60 235.0 190 68.4
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.4e-59 233.4 191 62.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.8e-59 233.0 191 66.5
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.2e-58 230.3 186 66.1
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.0e-58 229.6 190 63.2
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 3.4e-58 228.8 187 65.8
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.7e-57 226.5 191 63.4
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 6.5e-57 224.6 191 61.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.1e-56 223.8 191 64.4
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.4e-56 223.4 191 62.8
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 9.4e-56 220.7 186 63.4
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.7e-55 219.2 191 60.2
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.7e-55 219.2 188 58.5
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 4.7e-55 218.4 193 58.5
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 6.1e-55 218.0 191 60.7
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.4e-54 216.9 186 61.8
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 1.4e-54 216.9 196 58.2
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.4e-54 216.9 189 60.3
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.3e-54 216.1 192 58.3
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 2.3e-54 216.1 187 59.4
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 3.9e-54 215.3 194 59.8
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 6.7e-54 214.5 191 61.8
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 6.7e-54 214.5 192 59.4
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 6.7e-54 214.5 192 55.7
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 2.6e-53 212.6 192 61.5
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.6e-53 212.6 192 59.4
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 2.6e-53 212.6 191 61.3
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 3.3e-53 212.2 192 58.9
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 9.7e-53 210.7 162 66.0
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.3e-52 210.3 146 71.9
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.3e-52 210.3 192 60.4
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.7e-52 209.9 192 60.4
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.8e-52 209.1 183 60.1
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 3.7e-52 208.8 192 57.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 3.7e-52 208.8 164 64.6
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 3.7e-52 208.8 164 64.6
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.8e-52 208.4 184 59.8
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 8.2e-52 207.6 185 59.5
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.1e-51 207.2 192 59.4
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 2.4e-51 206.1 149 69.1
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 3.1e-51 205.7 192 58.3
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 5.3e-51 204.9 177 58.8
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 7.0e-51 204.5 185 60.0
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.2e-50 203.8 190 57.9
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 4.5e-50 201.8 191 58.6
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 7.7e-50 201.1 208 52.9
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.1e-48 197.2 188 55.9
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 5.5e-48 194.9 190 54.2
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.2e-47 193.7 149 62.4
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.1e-47 193.0 188 54.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 3.6e-47 192.2 188 52.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.0e-46 190.7 192 55.2
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 3.9e-46 188.7 164 56.1
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 3.9e-46 188.7 140 65.7
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 2.6e-45 186.0 191 52.4
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 7.4e-45 184.5 192 53.1
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 4.1e-43 178.7 161 55.9
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 7.0e-43 177.9 142 58.5
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 7.0e-43 177.9 130 66.9
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 1.0e-41 174.1 137 63.5
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 3.8e-41 172.2 186 52.7
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 1.1e-40 170.6 130 63.8
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 5.2e-38 161.8 141 64.5
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 3.7e-36 155.6 192 49.5
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.4e-35 152.9 192 46.9
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 7.0e-35 151.4 117 62.4
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.0e-33 147.5 189 47.1
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 6.5e-33 144.8 148 51.4
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.9e-32 143.3 185 42.2
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 9.4e-32 141.0 135 53.3
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 1.2e-31 140.6 191 44.5
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 2.1e-31 139.8 194 43.8
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.7e-31 139.4 195 41.5
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 3.6e-31 139.0 194 43.8
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 4.7e-31 138.7 192 44.3
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 4.7e-31 138.7 192 44.3
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 4.7e-31 138.7 190 45.8
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 6.1e-31 138.3 193 42.5
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.8e-30 136.7 192 43.8
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 2.3e-30 136.3 152 46.1
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.5e-29 133.7 176 41.5
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 2.0e-29 133.3 196 42.3
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 9.8e-29 131.0 193 41.5
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 2.2e-28 129.8 195 41.5
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 3.7e-28 129.0 184 38.0
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.6e-26 123.6 140 47.9
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 1.5e-24 117.1 188 39.4
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.9e-24 116.7 194 39.2
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.9e-22 107.8 76 69.7
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 1.3e-20 104.0 122 45.1
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 4.5e-18 95.5 120 46.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 8.6e-17 91.3 136 35.3
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 3.4e-13 79.3 184 29.9
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 3.4e-13 79.3 151 35.1
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 7.5e-13 78.2 134 38.1
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 8.0e-07 58.2 39 64.1


User provided reference genes

Program Settings