Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 1.8e-89 332.8 194 100.0
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.9e-35 153.3 142 62.0
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 6.4e-31 138.3 137 58.4
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.4e-30 137.1 141 56.0
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 9.2e-30 134.4 83 81.9
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 2.1e-29 133.3 140 52.9
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 3.5e-29 132.5 137 64.2
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.0e-28 131.0 75 85.3
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.0e-28 131.0 140 54.3
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.3e-28 130.6 87 75.9
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.7e-28 130.2 89 71.9
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 3.9e-28 129.0 137 54.7
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 6.6e-28 128.3 122 57.4
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 1.9e-27 126.7 75 84.0
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 1.9e-27 126.7 140 53.6
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.9e-27 126.7 134 56.7
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.5e-27 126.3 87 73.6
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 2.5e-27 126.3 87 73.6
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 3.3e-27 125.9 141 52.5
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 3.3e-27 125.9 87 74.7
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 7.3e-27 124.8 86 73.3
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 9.5e-27 124.4 87 72.4
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 9.5e-27 124.4 122 55.7
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 9.5e-27 124.4 85 72.9
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-26 124.0 87 72.4
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.2e-26 124.0 87 72.4
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 1.2e-26 124.0 82 74.4
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.6e-26 123.6 87 73.6
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.1e-26 123.2 133 56.4
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 2.1e-26 123.2 137 54.0
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 2.1e-26 123.2 87 71.3
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 2.8e-26 122.9 87 72.4
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.6e-26 122.5 134 55.2
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.6e-26 122.5 135 53.3
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 4.7e-26 122.1 134 55.2
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 8.1e-26 121.3 140 51.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.8e-25 120.2 141 50.4
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.8e-25 120.2 142 50.0
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.8e-25 120.2 140 51.4
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.8e-25 120.2 121 56.2
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 2.3e-25 119.8 140 48.6
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 2.3e-25 119.8 140 48.6
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.3e-25 119.8 83 71.1
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.1e-25 119.4 83 71.1
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 4.0e-25 119.0 84 73.8
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.0e-25 119.0 134 53.7
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 5.2e-25 118.6 84 72.6
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 5.2e-25 118.6 87 69.0
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 6.8e-25 118.2 81 71.6
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.2e-24 117.5 130 51.5
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 1.2e-24 117.5 87 70.1
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 2.0e-24 116.7 87 69.0
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 4.4e-24 115.5 87 67.8
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 4.4e-24 115.5 87 66.7
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 7.6e-24 114.8 141 48.9
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 7.6e-24 114.8 86 67.4
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 7.6e-24 114.8 87 66.7
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 9.9e-24 114.4 140 60.0
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 9.9e-24 114.4 138 50.0
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 9.9e-24 114.4 74 75.7
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.3e-23 114.0 140 57.1
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.3e-23 114.0 83 66.3
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 1.7e-23 113.6 87 65.5
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.2e-23 113.2 83 65.1
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 6.4e-23 111.7 83 68.7
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 8.4e-23 111.3 83 65.1
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 8.4e-23 111.3 85 67.1
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 2.4e-22 109.8 87 64.4
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 3.2e-22 109.4 80 68.8
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 3.5e-21 105.9 141 46.8
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 6.0e-21 105.1 111 54.1
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 1.7e-20 103.6 86 62.8
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 3.9e-20 102.4 75 70.7
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 2.5e-19 99.8 86 65.1
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 4.3e-19 99.0 86 65.1
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.6e-19 98.6 140 43.6
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 7.3e-19 98.2 141 46.1
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 9.6e-19 97.8 89 61.8
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 9.6e-19 97.8 140 43.6
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 2.8e-18 96.3 82 63.4
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 3.6e-18 95.9 113 56.6
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 4.7e-18 95.5 78 64.1
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 4.7e-18 95.5 73 69.9
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 4.7e-18 95.5 85 58.8
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 8.1e-18 94.7 76 67.1
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.1e-17 94.4 81 63.0
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.1e-17 94.4 140 45.0
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.4e-17 94.0 86 61.6
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.4e-17 93.2 149 40.3
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 3.1e-17 92.8 75 66.7
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 6.9e-17 91.7 69 65.2
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 8.9e-17 91.3 83 61.4
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 2.0e-16 90.1 81 63.0
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 2.6e-16 89.7 136 44.9
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 4.4e-16 89.0 75 64.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 5.8e-16 88.6 84 56.0
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 9.9e-16 87.8 88 58.0
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 2.2e-15 86.7 84 54.8
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 3.8e-15 85.9 81 55.6
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 8.4e-15 84.7 55 76.4
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 8.4e-15 84.7 55 76.4
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.4e-14 84.0 138 38.4
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 2.4e-14 83.2 55 74.5
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 2.4e-14 83.2 55 74.5
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.2e-13 80.9 87 50.6
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 2.3e-12 76.6 73 58.9
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 2.3e-12 76.6 50 76.0
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 3.9e-12 75.9 75 57.3
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 3.9e-12 75.9 75 57.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 1.9e-11 73.6 59 64.4
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 7.3e-11 71.6 74 47.3
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 9.6e-11 71.2 59 64.4
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.6e-10 70.5 74 45.9
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 6.2e-10 68.6 81 45.7
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.6e-08 63.2 43 67.4
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 2.2e-07 60.1 40 72.5
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.9e-07 59.7 68 48.5
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 3.8e-07 59.3 69 46.4
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 3.2e-06 56.2 61 47.5


User provided reference genes

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