Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17085 Corylus avellana HOM05D006523 ORTHO05D008212 1.1e-147 526.6 266 100.0
CiPaw.01G289000 Carya illinoinensis HOM05D006523 ORTHO05D008212 5.4e-73 278.5 268 63.4
CSS0042327 Camellia sinensis var. sinensis HOM05D006523 ORTHO05D008212 1.6e-69 266.9 265 61.1
QL08p059471 Quercus lobata HOM05D006523 ORTHO05D008212 1.1e-68 264.2 270 60.0
Manes.10G029100 Manihot esculenta HOM05D006523 ORTHO05D008212 5.2e-68 261.9 270 58.5
Dinv03705 Davidia involucrata HOM05D006523 ORTHO05D008212 9.0e-68 261.2 269 59.1
Ciclev10033366m.g Citrus clementina HOM05D006523 ORTHO05D008212 2.6e-67 259.6 260 59.2
Prupe.2G237400 Prunus persica HOM05D006523 ORTHO05D008212 2.6e-67 259.6 277 57.8
CANSAT56G2206 Cannabis sativa HOM05D006523 ORTHO05D008212 4.4e-67 258.8 268 59.0
FAN06G3404 Fragaria x ananassa HOM05D006523 ORTHO05D008212 5.8e-67 258.5 274 57.7
CANSAT56G0033 Cannabis sativa HOM05D006523 ORTHO05D008212 9.9e-67 257.7 268 58.6
TAR633G0385 Trochodendron aralioides HOM05D006523 ORTHO05D008212 1.3e-66 257.3 271 56.8
CsaV3_5G026760 Cucumis sativus L. HOM05D006523 ORTHO05D008212 8.4e-66 254.6 272 57.0
Potri.010G202200 Populus trichocarpa HOM05D006523 ORTHO05D008212 2.4e-65 253.1 266 57.9
FvH4_7g22770 Fragaria vesca HOM05D006523 ORTHO05D008212 3.2e-65 252.7 274 56.9
RcHm_v2.0_Chr1g0367871 Rosa chinensis HOM05D006523 ORTHO05D008212 3.2e-65 252.7 270 57.4
Actinidia23669 Actinidia chinensis HOM05D006523 ORTHO05D008212 4.2e-65 252.3 267 58.8
Cpa.g.sc1.423 Carica papaya HOM05D006523 ORTHO05D008212 4.2e-65 252.3 265 57.0
GSVIVG01016519001 Vitis vinifera HOM05D006523 ORTHO05D008212 4.2e-65 252.3 266 56.8
FAN01G0003 Fragaria x ananassa HOM05D006523 ORTHO05D008212 7.1e-65 251.5 274 56.9
FAN01G0853 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.2e-64 250.8 274 56.6
FAN03G0736 Fragaria x ananassa HOM05D006523 ORTHO05D008212 2.1e-64 250.0 283 55.1
Duzib114G1044 Durio zibethinus HOM05D006523 ORTHO05D008212 2.7e-64 249.6 264 56.8
Aa31sc24G140 Aethionema arabicum HOM05D006523 ORTHO05D008212 7.8e-64 248.1 278 55.0
THA.LOC104826739 Tarenaya hassleriana HOM05D006523 ORTHO05D008212 7.8e-64 248.1 270 54.8
Nn8g38773 Nelumbo nucifera HOM05D006523 ORTHO05D008212 2.3e-63 246.5 265 55.8
Eucgr.G02942 Eucalyptus grandis HOM05D006523 ORTHO05D008212 3.0e-63 246.1 267 55.1
COL.COLO4_15080 Corchorus olitorius HOM05D006523 ORTHO05D008212 3.9e-63 245.7 264 56.1
PGR142G0925 Punica granatum HOM05D006523 ORTHO05D008212 3.9e-63 245.7 261 56.3
FAN10G0859 Fragaria x ananassa HOM05D006523 ORTHO05D008212 5.1e-63 245.4 274 55.8
MD07G1200600 Malus domestica HOM05D006523 ORTHO05D008212 5.1e-63 245.4 275 55.6
Thecc.10G036400 Theobroma cacao HOM05D006523 ORTHO05D008212 8.7e-63 244.6 266 56.8
Ah.16g102450 Amaranthus hybridus HOM05D006523 ORTHO05D008212 3.3e-62 242.7 263 55.5
Ca_05884_v3 Cicer arietinum L. HOM05D006523 ORTHO05D008212 5.6e-62 241.9 272 54.8
LjContig00141g0009707 Lotus japonicus HOM05D006523 ORTHO05D008212 9.6e-62 241.1 274 51.5
Nitab4.5_0001655g0150 Nicotiana tabacum HOM05D006523 ORTHO05D008212 1.3e-61 240.7 264 53.8
TWI15G0822 Tripterygium wilfordii HOM05D006523 ORTHO05D008212 1.3e-61 240.7 265 55.5
Carub.0006s1202 Capsella rubella HOM05D006523 ORTHO05D008212 2.1e-61 240.0 264 55.3
MBI14_g12127_MAGBIO Magnolia biondii HOM05D006523 ORTHO05D008212 2.1e-61 240.0 269 55.4
Nitab4.5_0001040g0050 Nicotiana tabacum HOM05D006523 ORTHO05D008212 3.6e-61 239.2 270 53.0
Sabra10G0156100 Salix brachista HOM05D006523 ORTHO05D008212 3.6e-61 239.2 300 51.7
MELO3C021618.2 Cucumis melo HOM05D006523 ORTHO05D008212 4.8e-61 238.8 295 51.9
EL10Ac2g04730 Beta vulgaris HOM05D006523 ORTHO05D008212 1.1e-60 237.7 280 51.8
Gohir.D04G064000 Gossypium hirsutum HOM05D006523 ORTHO05D008212 1.1e-60 237.7 270 54.1
Migut.F01454 Erythranthe guttata HOM05D006523 ORTHO05D008212 2.4e-60 236.5 263 54.0
FAN06G1109 Fragaria x ananassa HOM05D006523 ORTHO05D008212 2.4e-60 236.5 271 55.7
Sp6g30170 Schrenkiella parvula HOM05D006523 ORTHO05D008212 2.4e-60 236.5 260 54.2
Aqoxy1G00906 Aquilegia oxysepala HOM05D006523 ORTHO05D008212 4.0e-60 235.7 273 52.7
SGA_v2.0_scaffold221G42676 Striga asiatica HOM05D006523 ORTHO05D008212 9.0e-60 234.6 272 52.6
AT5G13830 Arabidopsis thaliana HOM05D006523 ORTHO05D008212 1.2e-59 234.2 260 55.0
ECA238G1917 Erigeron canadensis HOM05D006523 ORTHO05D008212 1.5e-59 233.8 265 54.0
Thhalv10014583m.g Eutrema salsugineum HOM05D006523 ORTHO05D008212 2.0e-59 233.4 264 54.2
Medtr5g080020 Medicago truncatula HOM05D006523 ORTHO05D008212 2.6e-59 233.0 273 51.6
MSTRG.278 Avicennia marina HOM05D006523 ORTHO05D008212 4.5e-59 232.3 269 52.8
Gohir.A05G348500 Gossypium hirsutum HOM05D006523 ORTHO05D008212 4.5e-59 232.3 265 53.6
AL6G24460 Arabidopsis lyrata HOM05D006523 ORTHO05D008212 7.6e-59 231.5 264 54.2
BcaC04g19074 Brassica carinata HOM05D006523 ORTHO05D008212 9.9e-59 231.1 261 53.6
BolC9t59161H Brassica oleracea HOM05D006523 ORTHO05D008212 9.9e-59 231.1 261 53.6
Lsat_1_v5_gn_2_118400 Lactuca sativa HOM05D006523 ORTHO05D008212 9.9e-59 231.1 260 54.2
SalBow6G0031 Salvia bowleyana HOM05D006523 ORTHO05D008212 9.9e-59 231.1 262 55.0
VMungo0647G1953 Vigna mungo HOM05D006523 ORTHO05D008212 1.3e-58 230.7 266 49.6
BraA10t44516Z Brassica rapa HOM05D006523 ORTHO05D008212 1.7e-58 230.3 262 53.8
BcaC04g24249 Brassica carinata HOM05D006523 ORTHO05D008212 2.2e-58 229.9 262 53.8
A10p24510 Brassica napus HOM05D006523 ORTHO05D008212 2.2e-58 229.9 262 53.8
Dinv15863 Davidia involucrata HOM05D006523 ORTHO05D008212 3.8e-58 229.2 159 76.1
Phvul.008G232100 Phaseolus vulgaris HOM05D006523 ORTHO05D008212 6.4e-58 228.4 266 49.6
HanXRQChr07g0201431 Helianthus annuus HOM05D006523 ORTHO05D008212 8.4e-58 228.0 266 49.6
CARHR199600 Cardamine hirsuta HOM05D006523 ORTHO05D008212 2.4e-57 226.5 263 53.2
Sed0022265 Sechium edule HOM05D006523 ORTHO05D008212 2.4e-57 226.5 271 52.8
C09p63250 Brassica napus HOM05D006523 ORTHO05D008212 4.2e-57 225.7 262 53.1
PSO339G5561 Papaver somniferum HOM05D006523 ORTHO05D008212 5.4e-57 225.3 260 52.7
arahy.Tifrunner.gnm1.ann1.PJ9UI9 Arachis hypogaea HOM05D006523 ORTHO05D008212 1.2e-56 224.2 274 52.2
Hund16077 Selenicereus undatus HOM05D006523 ORTHO05D008212 2.7e-56 223.0 256 52.7
arahy.Tifrunner.gnm1.ann1.KN5X6X Arachis hypogaea HOM05D006523 ORTHO05D008212 1.0e-55 221.1 258 53.5
AUR62039361 Chenopodium quinoa HOM05D006523 ORTHO05D008212 1.0e-55 221.1 260 51.2
PSO513G0162 Papaver somniferum HOM05D006523 ORTHO05D008212 1.3e-55 220.7 261 52.9
Glyma.14G067900 Glycine max HOM05D006523 ORTHO05D008212 1.1e-54 217.6 259 51.4
Cc02_g07640 Coffea canephora HOM05D006523 ORTHO05D008212 4.3e-54 215.7 162 69.1
Lalb_Chr10g0104601 Lupinus albus HOM05D006523 ORTHO05D008212 5.6e-54 215.3 263 50.2
unitig_61.g26158 Utricularia gibba HOM05D006523 ORTHO05D008212 2.1e-53 213.4 267 48.3
unitig_70.g32538 Utricularia gibba HOM05D006523 ORTHO05D008212 2.1e-53 213.4 267 48.3
TPR.G3462 Trifolium pratense HOM05D006523 ORTHO05D008212 1.8e-52 210.3 167 67.1
Peaxi162Scf00658g00085 Petunia axillaris HOM05D006523 ORTHO05D008212 6.9e-52 208.4 145 70.3
CDE07G1400 Ceratophyllum demersum HOM05D006523 ORTHO05D008212 4.5e-51 205.7 256 48.0
ATR0559G152 Amborella trichopoda HOM05D006523 ORTHO05D008212 1.3e-50 204.1 255 49.8
Os03g0822300 Oryza sativa ssp. japonica HOM05D006523 ORTHO05D008212 1.7e-50 203.8 267 48.7
Zm00001eb062790 Zea mays HOM05D006523 ORTHO05D008212 1.7e-50 203.8 266 47.4
Gorai.012G071600 Gossypium raimondii HOM05D006523 ORTHO05D008212 2.9e-50 203.0 160 67.5
Nn2g11152 Nelumbo nucifera HOM05D006523 ORTHO05D008212 4.9e-50 202.2 259 49.8
SEGI_07978 Sequoiadendron giganteum HOM05D006523 ORTHO05D008212 6.7e-47 191.8 269 46.5
vmacro07184 Vaccinium macrocarpon HOM05D006523 ORTHO05D008212 4.8e-45 185.7 271 47.2
Atru.chr12.422 Acer truncatum HOM05D006523 ORTHO05D008212 2.4e-44 183.3 231 51.9
DCAR_011715 Daucus carota HOM05D006523 ORTHO05D008212 9.0e-44 181.4 225 52.4
ClCG09G019630 Citrullus lanatus HOM05D006523 ORTHO05D008212 2.6e-43 179.9 139 70.5
AUR62012110 Chenopodium quinoa HOM05D006523 ORTHO05D008212 4.5e-43 179.1 224 50.0
Mapoly0038s0066 Marchantia polymorpha HOM05D006523 ORTHO05D008212 2.5e-41 173.3 258 43.4
Lj1C939G12 Lonicera japonica HOM05D006523 ORTHO05D008212 7.1e-41 171.8 125 71.2
QL02p008420 Quercus lobata HOM05D006523 ORTHO05D008212 7.4e-38 161.8 116 75.0
Pp3c22_17560 Physcomitrium patens HOM05D006523 ORTHO05D008212 2.4e-36 156.8 261 41.4
AagrBONN_evm.TU.Sc2ySwM_228.3773 Anthoceros agrestis HOM05D006523 ORTHO05D008212 1.4e-33 147.5 158 52.5
SMO145G0100 Selaginella moellendorffii HOM05D006523 ORTHO05D008212 4.2e-33 146.0 254 39.8
Oeu016465.1 Olea europaea HOM05D006523 ORTHO05D008212 4.6e-32 142.5 106 71.7
MD01G1135900 Malus domestica HOM05D006523 ORTHO05D008212 1.4e-20 104.4 100 59.0
arahy.Tifrunner.gnm1.ann1.E9XZMQ Arachis hypogaea HOM05D006523 ORTHO05D015430 4.1e-20 102.8 92 63.0
arahy.Tifrunner.gnm1.ann1.96VUID Arachis hypogaea HOM05D006523 ORTHO05D008212 9.1e-20 101.7 216 38.0
arahy.Tifrunner.gnm1.ann1.TGUH8U Arachis hypogaea HOM05D006523 ORTHO05D008212 7.7e-19 98.6 216 37.5
CBR_g49713 Chara braunii HOM05D006523 ORTHO05D008212 1.9e-17 94.0 351 28.5
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea HOM05D006523 ORTHO05D008212 2.5e-17 93.6 111 53.2
arahy.Tifrunner.gnm1.ann1.5T6QS1 Arachis hypogaea HOM05D006523 ORTHO05D008212 3.2e-17 93.2 92 59.8
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 1.2e-16 91.3 113 51.3
MCO07G108 Micromonas commoda HOM05D006523 ORTHO05D008212 3.0e-15 86.7 287 30.3
Cc08_g07630 Coffea canephora HOM05D006523 ORTHO05D008212 2.6e-14 83.6 60 66.7
CBR_g48797 Chara braunii HOM05D001732 ORTHO05D006715 3.3e-14 83.2 228 28.1
HPP92_015540 Vanilla planifolia HOM05D006523 ORTHO05D008212 4.1e-12 76.3 145 40.0
Nitab4.5_0004559g0030 Nicotiana tabacum HOM05D006523 ORTHO05D008212 9.1e-12 75.1 60 60.0
Sc14g0004660 Simmondsia chinensis HOM05D006523 ORTHO05D008212 9.1e-12 75.1 156 34.6
Cre06.g302650 Chlamydomonas reinhardtii HOM05D006523 ORTHO05D008212 2.6e-11 73.6 160 35.0
Nitab4.5_0000004g0130 Nicotiana tabacum HOM05D006523 ORTHO05D008212 5.9e-11 72.4 87 50.6
PRCOL_00004637 Prasinoderma coloniale HOM05D006523 ORTHO05D008212 1.7e-10 70.9 149 35.6


User provided reference genes

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