Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17061 Corylus avellana HOM05D003373 ORTHO05D004419 6.2e-51 203.8 97 100.0
Haze_12097 Corylus avellana HOM05D003373 ORTHO05D004419 2.4e-39 165.2 81 96.3
Cfa009067 Carpinus fangiana HOM05D003373 ORTHO05D004419 2.7e-38 161.8 81 93.8
Haze_04255 Corylus avellana HOM05D003373 ORTHO05D004419 7.3e-36 153.7 97 79.4
Dinv34191 Davidia involucrata HOM05D003373 ORTHO05D004419 1.4e-34 149.4 81 85.2
GSVIVG01020088001 Vitis vinifera HOM05D003373 ORTHO05D004419 1.4e-34 149.4 81 88.9
Manes.05G095400 Manihot esculenta HOM05D003373 ORTHO05D004419 1.8e-34 149.1 81 86.4
CSS0018229 Camellia sinensis var. sinensis HOM05D003373 ORTHO05D004419 1.2e-33 146.4 81 84.0
CiPaw.06G080000 Carya illinoinensis HOM05D003373 ORTHO05D004419 1.2e-33 146.4 81 84.0
Dinv24947 Davidia involucrata HOM05D003373 ORTHO05D004419 1.2e-33 146.4 81 84.0
PGR119G0099 Punica granatum HOM05D003373 ORTHO05D004419 3.4e-33 144.8 91 76.9
Ciclev10031519m.g Citrus clementina HOM05D003373 ORTHO05D004419 4.5e-33 144.4 91 78.0
THA.LOC104822090 Tarenaya hassleriana HOM05D003373 ORTHO05D004419 4.5e-33 144.4 81 84.0
CSS0033815 Camellia sinensis var. sinensis HOM05D003373 ORTHO05D004419 5.8e-33 144.1 81 82.7
CANSAT35G1086 Cannabis sativa HOM05D003373 ORTHO05D004419 5.8e-33 144.1 81 84.0
QL03p066330 Quercus lobata HOM05D003373 ORTHO05D004419 7.6e-33 143.7 83 83.1
Aa31LG4G10950 Aethionema arabicum HOM05D003373 ORTHO05D004419 1.3e-32 142.9 82 81.7
Cc11_g13620 Coffea canephora HOM05D003373 ORTHO05D004419 1.7e-32 142.5 82 84.1
Manes.01G192000 Manihot esculenta HOM05D003373 ORTHO05D004419 2.2e-32 142.1 81 81.5
Cpa.g.sc5.285 Carica papaya HOM05D003373 ORTHO05D004419 3.8e-32 141.4 81 81.5
CiPaw.05G141000 Carya illinoinensis HOM05D003373 ORTHO05D004419 6.4e-32 140.6 81 82.7
Atru.chr11.1870 Acer truncatum HOM05D003373 ORTHO05D004419 8.4e-32 140.2 81 79.0
PGR102G0330 Punica granatum HOM05D003373 ORTHO05D004419 8.4e-32 140.2 81 80.2
MSTRG.2363 Avicennia marina HOM05D003373 ORTHO05D004419 1.1e-31 139.8 88 76.1
Oeu043029.1 Olea europaea HOM05D003373 ORTHO05D004419 1.4e-31 139.4 81 79.0
Potri.010G034900 Populus trichocarpa HOM05D003373 ORTHO05D004419 1.9e-31 139.0 81 80.2
Sabra10G0029900 Salix brachista HOM05D003373 ORTHO05D004419 1.9e-31 139.0 81 80.2
ClCG05G024690 Citrullus lanatus HOM05D003373 ORTHO05D004419 3.2e-31 138.3 81 79.0
TWI18G0023 Tripterygium wilfordii HOM05D003373 ORTHO05D004419 3.2e-31 138.3 81 80.2
TWI36G0800 Tripterygium wilfordii HOM05D003373 ORTHO05D004419 3.2e-31 138.3 81 81.5
Hma1.2p1_1045F.1_g251400 Hydrangea macrophylla HOM05D003373 ORTHO05D004419 4.2e-31 137.9 81 79.0
SalBow8G0803 Salvia bowleyana HOM05D003373 ORTHO05D004419 4.2e-31 137.9 84 75.0
Gohir.A04G097600 Gossypium hirsutum HOM05D003373 ORTHO05D004419 5.4e-31 137.5 81 77.8
Gorai.012G121700 Gossypium raimondii HOM05D003373 ORTHO05D004419 5.4e-31 137.5 81 77.8
Aqoxy3G03242 Aquilegia oxysepala HOM05D003373 ORTHO05D004419 7.1e-31 137.1 91 74.7
Sabra08G0147700 Salix brachista HOM05D003373 ORTHO05D004419 9.3e-31 136.7 82 81.7
Lalb_Chr10g0097901 Lupinus albus HOM05D003373 ORTHO05D004419 1.2e-30 136.3 81 80.2
Oeu057174.1 Olea europaea HOM05D003373 ORTHO05D004419 1.2e-30 136.3 81 77.8
Potri.008G194200 Populus trichocarpa HOM05D003373 ORTHO05D004419 1.2e-30 136.3 82 80.5
Thecc.02G234000 Theobroma cacao HOM05D003373 ORTHO05D004419 1.2e-30 136.3 81 77.8
CsaV3_5G032210 Cucumis sativus L. HOM05D003373 ORTHO05D004419 1.6e-30 136.0 81 77.8
FvH4_4g35680 Fragaria vesca HOM05D003373 ORTHO05D004419 1.6e-30 136.0 81 79.0
FAN12G3521 Fragaria x ananassa HOM05D003373 ORTHO05D004419 1.6e-30 136.0 81 79.0
MELO3C012054.2 Cucumis melo HOM05D003373 ORTHO05D004419 2.1e-30 135.6 81 77.8
Duzib248G1211 Durio zibethinus HOM05D003373 ORTHO05D004419 2.1e-30 135.6 81 77.8
FAN07G0752 Fragaria x ananassa HOM05D003373 ORTHO05D004419 2.1e-30 135.6 81 79.0
FAN17G1936 Fragaria x ananassa HOM05D003373 ORTHO05D004419 2.7e-30 135.2 81 79.0
Glyma.01G041300 Glycine max HOM05D003373 ORTHO05D004419 2.7e-30 135.2 87 74.7
Gohir.D04G137300 Gossypium hirsutum HOM05D003373 ORTHO05D004419 2.7e-30 135.2 81 76.5
Ca_04701_v3 Cicer arietinum L. HOM05D003373 ORTHO05D004419 3.5e-30 134.8 81 77.8
Lj2g0024788 Lotus japonicus HOM05D003373 ORTHO05D004419 3.5e-30 134.8 81 80.2
Nn4g23016 Nelumbo nucifera HOM05D003373 ORTHO05D004419 3.5e-30 134.8 81 77.8
Phvul.002G067800 Phaseolus vulgaris HOM05D003373 ORTHO05D004419 3.5e-30 134.8 91 72.5
SGA_v2.0_scaffold63G21675 Striga asiatica HOM05D003373 ORTHO05D004419 3.5e-30 134.8 82 76.8
TAR629G0400 Trochodendron aralioides HOM05D003373 ORTHO05D004419 3.5e-30 134.8 81 76.5
Eucgr.B02587 Eucalyptus grandis HOM05D003373 ORTHO05D004419 4.6e-30 134.4 81 77.8
FAN22G0404 Fragaria x ananassa HOM05D003373 ORTHO05D004419 4.6e-30 134.4 81 77.8
Psat2g126240 Pisum sativum HOM05D003373 ORTHO05D004419 4.6e-30 134.4 91 73.6
Sed0023513 Sechium edule HOM05D003373 ORTHO05D004419 4.6e-30 134.4 81 77.8
arahy.Tifrunner.gnm1.ann1.NIK4ZB Arachis hypogaea HOM05D003373 ORTHO05D004419 7.9e-30 133.7 81 79.0
arahy.Tifrunner.gnm1.ann1.YF4WKN Arachis hypogaea HOM05D003373 ORTHO05D004419 7.9e-30 133.7 81 79.0
Lj6A795T73 Lonicera japonica HOM05D003373 ORTHO05D004419 7.9e-30 133.7 81 75.3
TPR.G31079 Trifolium pratense HOM05D003373 ORTHO05D004419 7.9e-30 133.7 81 77.8
Lsat_1_v5_gn_4_9400 Lactuca sativa HOM05D003373 ORTHO05D004419 1.0e-29 133.3 87 72.4
Medtr5g037960 Medicago truncatula HOM05D003373 ORTHO05D004419 1.0e-29 133.3 81 77.8
Actinidia04028 Actinidia chinensis HOM05D003373 ORTHO05D004419 1.3e-29 132.9 81 76.5
Glyma.02G022800 Glycine max HOM05D003373 ORTHO05D004419 1.3e-29 132.9 87 73.6
VMungo1215G0200 Vigna mungo HOM05D003373 ORTHO05D004419 1.3e-29 132.9 81 75.3
AL1G38400 Arabidopsis lyrata HOM05D003373 ORTHO05D004419 1.8e-29 132.5 87 72.4
COL.COLO4_36201 Corchorus olitorius HOM05D003373 ORTHO05D004419 2.3e-29 132.1 81 74.1
Lsat_1_v5_gn_8_163340 Lactuca sativa HOM05D003373 ORTHO05D004419 2.3e-29 132.1 81 74.1
Lalb_Chr04g0256431 Lupinus albus HOM05D003373 ORTHO05D004419 2.3e-29 132.1 81 76.5
RcHm_v2.0_Chr4g0445281 Rosa chinensis HOM05D003373 ORTHO05D004419 2.3e-29 132.1 81 76.5
Duzib268G0991 Durio zibethinus HOM05D003373 ORTHO05D004419 3.0e-29 131.7 81 74.1
AT1G27090 Arabidopsis thaliana HOM05D003373 ORTHO05D004419 3.9e-29 131.3 87 72.4
MSTRG.13397 Avicennia marina HOM05D003373 ORTHO05D004419 3.9e-29 131.3 82 76.8
Gohir.A05G320900 Gossypium hirsutum HOM05D003373 ORTHO05D004419 3.9e-29 131.3 81 75.3
Thhalv10007745m.g Eutrema salsugineum HOM05D003373 ORTHO05D004419 5.1e-29 131.0 81 74.1
Glyma.01G122300 Glycine max HOM05D003373 ORTHO05D004419 5.1e-29 131.0 87 72.4
SGA_v2.0_scaffold467G52045 Striga asiatica HOM05D003373 ORTHO05D004419 5.1e-29 131.0 82 75.6
Gohir.D05G323100 Gossypium hirsutum HOM05D003373 ORTHO05D004419 8.7e-29 130.2 81 74.1
Gorai.009G346800 Gossypium raimondii HOM05D003373 ORTHO05D004419 8.7e-29 130.2 81 74.1
MBI01_g01238_MAGBIO Magnolia biondii HOM05D003373 ORTHO05D004419 8.7e-29 130.2 81 71.6
Nn3g17111 Nelumbo nucifera HOM05D003373 ORTHO05D004419 8.7e-29 130.2 81 72.8
SGA_v2.0_scaffold87G26974 Striga asiatica HOM05D003373 ORTHO05D004419 8.7e-29 130.2 82 73.2
BolC8t49893H Brassica oleracea HOM05D003373 ORTHO05D004419 1.1e-28 129.8 81 70.4
Actinidia31168 Actinidia chinensis HOM05D003373 ORTHO05D004419 1.5e-28 129.4 81 75.3
Carub.0001s2388 Capsella rubella HOM05D003373 ORTHO05D004419 1.5e-28 129.4 87 70.1
Duzib251G0793 Durio zibethinus HOM05D003373 ORTHO05D004419 1.5e-28 129.4 81 75.3
ECA234G3640 Erigeron canadensis HOM05D003373 ORTHO05D004419 1.5e-28 129.4 79 72.2
MD13G1080700 Malus domestica HOM05D003373 ORTHO05D004419 3.3e-28 128.3 81 74.1
Sp1g21690 Schrenkiella parvula HOM05D003373 ORTHO05D004419 3.3e-28 128.3 87 74.7
AUR62026278 Chenopodium quinoa HOM05D003373 ORTHO05D004419 4.3e-28 127.9 81 71.6
BcaC07g39253 Brassica carinata HOM05D003373 ORTHO05D004419 5.6e-28 127.5 81 69.1
C08p22560 Brassica napus HOM05D003373 ORTHO05D004419 5.6e-28 127.5 81 69.1
Migut.E00120 Erythranthe guttata HOM05D003373 ORTHO05D004419 5.6e-28 127.5 82 73.2
HanXRQChr03g0092821 Helianthus annuus HOM05D003373 ORTHO05D004419 5.6e-28 127.5 91 68.1
CARHR024810 Cardamine hirsuta HOM05D003373 ORTHO05D004419 7.4e-28 127.1 81 71.6
A08p27730 Brassica napus HOM05D003373 ORTHO05D004419 1.3e-27 126.3 81 70.4
BraA08t34708Z Brassica rapa HOM05D003373 ORTHO05D004419 1.3e-27 126.3 81 70.4
Migut.L01354 Erythranthe guttata HOM05D003373 ORTHO05D004419 1.3e-27 126.3 82 70.7
MD16G1080200 Malus domestica HOM05D003373 ORTHO05D004419 1.3e-27 126.3 81 74.1
TAR374G1081 Trochodendron aralioides HOM05D003373 ORTHO05D004419 1.3e-27 126.3 81 72.8
Glyma.01G047300 Glycine max HOM05D003373 ORTHO05D004419 3.7e-27 124.8 87 69.0
Lalb_Chr17g0340231 Lupinus albus HOM05D003373 ORTHO05D004419 3.7e-27 124.8 78 74.4
HanXRQChr17g0570411 Helianthus annuus HOM05D003373 ORTHO05D004419 6.2e-27 124.0 81 69.1
PGSC0003DMG400007711 Solanum tuberosum HOM05D003373 ORTHO05D004419 1.8e-26 122.5 84 69.0
Rhsim12G0129000 Rhododendron simsii HOM05D003373 ORTHO05D004419 2.4e-26 122.1 83 68.7
Lj3A1043T79 Lonicera japonica HOM05D003373 ORTHO05D004419 3.1e-26 121.7 75 77.3
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 4.0e-26 121.3 81 69.1
BolC5t31088H Brassica oleracea HOM05D003373 ORTHO05D004419 4.0e-26 121.3 81 69.1
PSO591G0008 Papaver somniferum HOM05D003373 ORTHO05D004419 4.0e-26 121.3 87 67.8
CDE09G0772 Ceratophyllum demersum HOM05D003373 ORTHO05D004419 5.3e-26 120.9 81 67.9
PSO832G2541 Papaver somniferum HOM05D003373 ORTHO05D004419 6.9e-26 120.6 87 66.7
Solyc01g010440.4 Solanum lycopersicum HOM05D003373 ORTHO05D004419 6.9e-26 120.6 84 67.9
Sopen01g006060 Solanum pennellii HOM05D003373 ORTHO05D004419 6.9e-26 120.6 84 67.9
EL10Ac6g13134 Beta vulgaris HOM05D003373 ORTHO05D004419 9.0e-26 120.2 81 69.1
DCAR_031055 Daucus carota HOM05D003373 ORTHO05D004419 9.0e-26 120.2 82 63.4
BcaB07g32385 Brassica carinata HOM05D003373 ORTHO05D004419 1.5e-25 119.4 81 67.9
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 1.5e-25 119.4 81 67.9
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 1.5e-25 119.4 81 67.9
unitig_62.g23682 Utricularia gibba HOM05D003373 ORTHO05D004419 1.5e-25 119.4 82 70.7
Ah.02g131980 Amaranthus hybridus HOM05D003373 ORTHO05D004419 2.0e-25 119.0 81 69.1
Hund25279 Selenicereus undatus HOM05D003373 ORTHO05D004419 2.0e-25 119.0 81 70.4
unitig_52.g17172 Utricularia gibba HOM05D003373 ORTHO05D004419 2.6e-25 118.6 82 67.1
BcaB03g11980 Brassica carinata HOM05D003373 ORTHO05D004419 4.5e-25 117.9 81 65.4
SalBow2G1107 Salvia bowleyana HOM05D003373 ORTHO05D004419 4.5e-25 117.9 82 65.9
CDE08G0466 Ceratophyllum demersum HOM05D003373 ORTHO05D004419 5.8e-25 117.5 81 65.4
PSO017G0861 Papaver somniferum HOM05D003373 ORTHO05D004419 1.7e-24 115.9 82 62.2
Sc11g0001580 Simmondsia chinensis HOM05D003373 ORTHO05D004419 1.7e-24 115.9 87 62.1
PSO478G2017 Papaver somniferum HOM05D003373 ORTHO05D004419 2.2e-24 115.5 82 62.2
DCAR_007126 Daucus carota HOM05D003373 ORTHO05D004419 4.9e-24 114.4 81 61.7
HPP92_019651 Vanilla planifolia HOM05D003373 ORTHO05D004419 1.4e-23 112.8 87 63.2
SGA_v2.0_scaffold166G38286 Striga asiatica HOM05D003373 ORTHO05D004419 2.7e-22 108.6 84 60.7
Nitab4.5_0003297g0010 Nicotiana tabacum HOM05D003373 ORTHO05D004419 3.9e-21 104.8 72 69.4
Peaxi162Scf00209g00714 Petunia axillaris HOM05D003373 ORTHO05D004419 7.4e-20 100.5 85 56.5
ATR0665G354 Amborella trichopoda HOM05D003373 ORTHO05D004419 1.6e-19 99.4 81 58.0
Solyc05g006900.2 Solanum lycopersicum HOM05D003373 ORTHO05D004419 1.6e-19 99.4 80 57.5
vmacro16318 Vaccinium macrocarpon HOM05D003373 ORTHO05D004419 2.8e-19 98.6 59 79.7
Pp3c25_8180 Physcomitrium patens HOM05D003373 ORTHO05D004419 4.8e-19 97.8 82 54.9
Pp3c25_8182 Physcomitrium patens HOM05D003373 ORTHO05D004419 4.8e-19 97.8 82 54.9
Sopen05g002860 Solanum pennellii HOM05D003373 ORTHO05D004419 2.4e-18 95.5 79 57.0
Pp3c16_590 Physcomitrium patens HOM05D003373 ORTHO05D004419 3.1e-18 95.1 84 53.6
PGSC0003DMG400017635 Solanum tuberosum HOM05D003373 ORTHO05D004419 5.3e-18 94.4 79 55.7
Nitab4.5_0003732g0020 Nicotiana tabacum HOM05D003373 ORTHO05D004419 1.2e-17 93.2 80 56.2
Os03g0688200 Oryza sativa ssp. japonica HOM05D003373 ORTHO05D004419 1.2e-17 93.2 82 53.7
SEGI_00885 Sequoiadendron giganteum HOM05D003373 ORTHO05D004419 1.2e-17 93.2 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.3903 Anthoceros agrestis HOM05D003373 ORTHO05D004419 2.0e-17 92.4 82 53.7
AUR62026466 Chenopodium quinoa HOM05D003373 ORTHO05D004419 2.0e-17 92.4 56 80.4
Manes.12G071300 Manihot esculenta HOM05D003373 ORTHO05D004419 1.0e-16 90.1 56 78.6
SEGI_31454 Sequoiadendron giganteum HOM05D003373 ORTHO05D004419 8.4e-16 87.0 81 49.4
Cc00_g35170 Coffea canephora HOM05D003373 ORTHO05D004419 1.9e-15 85.9 75 54.7
Nitab4.5_0008971g0050 Nicotiana tabacum HOM05D003373 ORTHO05D004419 4.6e-14 81.3 62 66.1
Zm00001eb217180 Zea mays HOM05D003373 ORTHO05D004419 4.6e-14 81.3 80 52.5
Zm00001eb053410 Zea mays HOM05D003373 ORTHO05D004419 7.9e-14 80.5 80 51.2
Nitab4.5_0002382g0020 Nicotiana tabacum HOM05D003373 ORTHO05D004419 1.0e-13 80.1 62 64.5
SMO012G0008 Selaginella moellendorffii HOM05D003373 ORTHO05D004419 1.0e-13 80.1 77 51.9
SMO141G0251 Selaginella moellendorffii HOM05D003373 ORTHO05D004419 1.0e-13 80.1 77 51.9
Lsat_1_v5_gn_8_36201 Lactuca sativa HOM05D003373 ORTHO05D004419 1.3e-13 79.7 82 51.2
Mapoly0083s0034 Marchantia polymorpha HOM05D003373 ORTHO05D004419 3.0e-13 78.6 72 48.6
SalBow3G2377 Salvia bowleyana HOM05D003373 ORTHO05D004419 3.0e-13 78.6 58 69.0
SalBow8G0677 Salvia bowleyana HOM05D003373 ORTHO05D004419 6.7e-13 77.4 58 69.0
Nitab4.5_0000710g0020 Nicotiana tabacum HOM05D003373 ORTHO05D004419 1.9e-12 75.9 57 66.7
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 7.4e-12 73.9 49 77.6
CBR_g4061 Chara braunii HOM05D003373 ORTHO05D004419 9.7e-12 73.6 73 46.6
A07p13300 Brassica napus HOM05D003373 ORTHO05D041218 8.2e-11 70.5 44 65.9
BraA07t29101Z Brassica rapa HOM05D003373 ORTHO05D041218 8.2e-11 70.5 44 65.9
C02p06900 Brassica napus HOM05D003373 ORTHO05D004419 1.4e-10 69.7 42 66.7
C02p07020 Brassica napus HOM05D003373 ORTHO05D004419 1.4e-10 69.7 42 66.7
Peaxi162Scf00026g00225 Petunia axillaris HOM05D003373 ORTHO05D004419 2.4e-10 68.9 58 58.6
HPP92_019602 Vanilla planifolia HOM05D003373 ORTHO05D004419 3.8e-08 61.6 61 45.9


User provided reference genes

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