Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 8.8e-179 630.2 320 100.0
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 4.1e-144 515.0 318 83.0
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 5.4e-144 514.6 273 96.0
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.7e-132 474.9 440 60.9
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 2.6e-130 469.2 321 75.1
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 3.2e-128 462.2 320 73.4
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 7.8e-127 457.6 319 72.4
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.6e-124 449.9 320 71.9
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 1.6e-124 449.9 320 70.9
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 6.2e-124 448.0 320 72.5
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 6.2e-124 448.0 320 70.9
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.4e-123 446.8 320 73.1
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 2.0e-122 443.0 320 70.6
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.0e-122 443.0 318 71.4
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 5.8e-122 441.4 320 71.6
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 7.6e-122 441.0 320 70.3
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.3e-121 440.3 318 69.8
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 4.9e-121 438.3 318 70.1
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.1e-120 437.2 320 68.8
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.4e-120 436.0 318 68.2
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 4.2e-120 435.3 320 68.1
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 7.1e-120 434.5 321 68.8
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.2e-119 433.7 321 68.8
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.7e-119 432.6 321 68.5
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 6.0e-119 431.4 320 69.1
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.0e-118 430.6 320 69.1
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.0e-118 430.6 318 68.2
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 1.3e-118 430.3 320 69.1
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.9e-117 426.4 320 69.1
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.3e-117 425.2 320 68.4
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 4.3e-117 425.2 320 67.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 9.6e-117 424.1 320 68.1
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 4.8e-116 421.8 318 65.7
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 4.8e-116 421.8 320 68.1
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 6.2e-116 421.4 320 68.1
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 1.1e-115 420.6 321 68.5
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 1.1e-115 420.6 321 68.5
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 9.0e-115 417.5 318 67.6
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.0e-114 416.4 320 66.6
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 7.6e-114 414.5 320 67.2
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 8.4e-113 411.0 320 65.9
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.1e-112 410.6 318 65.7
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 4.2e-112 408.7 354 62.1
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 9.3e-112 407.5 364 60.7
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.3e-110 403.7 320 64.1
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.1e-109 400.6 318 61.3
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 3.3e-109 399.1 318 63.5
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 9.6e-109 397.5 320 62.2
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.7e-108 395.6 318 61.3
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 6.2e-108 394.8 320 63.4
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 8.1e-108 394.4 318 62.6
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 5.3e-107 391.7 320 64.4
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 3.4e-106 389.0 318 59.7
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.0e-105 387.5 344 58.4
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.3e-105 387.1 322 60.9
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 3.8e-105 385.6 319 61.4
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.9e-105 385.2 320 61.2
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 1.2e-103 380.6 320 60.9
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 4.6e-103 378.6 320 60.0
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 6.0e-103 378.3 319 60.2
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.9e-102 375.6 317 59.9
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 5.1e-102 375.2 318 58.8
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 8.7e-102 374.4 316 60.4
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 1.5e-101 373.6 315 58.1
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 1.3e-100 370.5 318 58.2
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 4.5e-98 362.1 298 59.7
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.3e-97 360.5 318 56.9
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 4.2e-96 355.5 371 53.4
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 1.6e-95 353.6 320 56.9
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 1.6e-92 343.6 325 54.8
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 1.8e-91 340.1 319 54.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 3.1e-91 339.3 319 53.9
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 3.1e-91 339.3 319 53.9
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 3.4e-90 335.9 319 53.9
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 1.0e-89 334.3 298 60.4
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.0e-89 334.3 312 55.1
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.7e-89 333.6 321 55.8
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 5.0e-89 332.0 248 69.0
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 7.2e-88 328.2 294 55.1
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.2e-87 327.4 313 52.7
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 6.1e-87 325.1 249 66.3
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 7.9e-87 324.7 319 50.5
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 1.4e-86 323.9 243 70.8
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 1.4e-86 323.9 248 66.1
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 8.8e-86 321.2 319 50.8
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 2.0e-85 320.1 319 52.4
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.3e-85 319.3 268 62.3
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 5.7e-85 318.5 319 50.8
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 7.4e-85 318.2 268 61.9
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.7e-84 317.0 319 51.4
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 4.1e-83 312.4 302 53.3
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 3.2e-80 302.8 223 66.8
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 2.3e-78 296.6 324 50.9
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 4.8e-76 288.9 238 59.2
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 7.0e-75 285.0 221 66.5
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 2.6e-74 283.1 336 48.8
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 6.7e-70 268.5 192 74.0
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 8.8e-70 268.1 304 46.4
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 3.3e-69 266.2 228 61.4
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 2.2e-68 263.5 307 46.3
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 4.4e-61 239.2 242 50.0
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 6.3e-60 235.3 240 54.6
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 4.4e-45 186.0 286 37.1
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 5.6e-40 169.1 125 66.4
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.5e-32 144.4 272 29.0
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.8e-31 140.2 113 61.9
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.1e-23 114.0 78 71.8
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 8.1e-23 112.1 78 70.5
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 8.9e-22 108.6 78 64.1
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 2.9e-20 103.6 76 63.2
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 1.1e-19 101.7 74 66.2
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 4.2e-11 73.2 63 55.6


User provided reference genes

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