Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 2.8e-269 931.4 476 100.0
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 5.3e-212 741.1 458 84.5
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.8e-191 672.9 402 84.6
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 2.0e-190 669.5 402 85.1
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 6.5e-186 654.4 402 82.6
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 4.4e-182 641.7 400 79.2
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 7.4e-182 641.0 401 78.6
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 7.4e-182 641.0 403 78.7
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 4.8e-181 638.3 403 78.4
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 8.2e-181 637.5 460 72.8
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 2.4e-180 636.0 401 78.3
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 2.4e-180 636.0 401 78.1
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 5.3e-180 634.8 403 77.2
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 3.8e-178 628.6 400 79.5
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 6.5e-178 627.9 400 77.2
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 2.7e-176 622.5 404 77.0
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 2.7e-176 622.5 404 78.2
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 3.6e-176 622.1 403 78.4
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 3.6e-176 622.1 403 78.4
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 4.7e-176 621.7 429 73.9
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 2.3e-175 619.4 404 76.5
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 6.7e-175 617.8 404 76.2
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 6.7e-175 617.8 404 76.7
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 4.4e-174 615.1 456 69.1
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 2.2e-173 612.8 400 75.2
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 2.8e-173 612.5 404 77.5
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 4.8e-173 611.7 466 67.8
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 6.3e-173 611.3 404 74.8
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 1.8e-172 609.8 401 74.6
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 3.1e-172 609.0 403 74.9
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 4.1e-172 608.6 403 77.2
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 9.1e-172 607.4 458 67.7
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 2.7e-171 605.9 458 67.2
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 5.9e-171 604.7 402 75.4
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.0e-170 604.0 403 77.2
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 1.0e-170 604.0 400 75.0
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 1.3e-170 603.6 400 76.0
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 2.9e-170 602.4 403 75.4
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 3.8e-170 602.1 405 74.1
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 6.5e-170 601.3 408 74.3
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 8.5e-170 600.9 456 69.5
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 1.1e-169 600.5 460 67.6
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.5e-169 600.1 404 74.0
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 1.9e-169 599.7 399 75.2
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 1.9e-169 599.7 464 67.5
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 4.2e-169 598.6 401 75.1
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 5.5e-169 598.2 403 76.7
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 5.5e-169 598.2 403 76.7
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 9.4e-169 597.4 400 73.2
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 1.6e-168 596.7 460 67.0
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 2.7e-168 595.9 400 75.0
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 4.7e-168 595.1 457 66.5
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 8.0e-168 594.3 404 73.5
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 8.0e-168 594.3 413 72.9
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 8.0e-168 594.3 400 75.0
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.8e-167 593.2 403 75.4
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 2.3e-167 592.8 466 65.2
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 2.3e-167 592.8 403 76.7
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 2.3e-167 592.8 403 76.7
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 5.2e-167 591.7 457 66.3
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.2e-167 591.7 403 76.7
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 6.8e-167 591.3 458 69.9
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 8.8e-167 590.9 404 73.3
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 8.8e-167 590.9 403 72.5
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 1.5e-166 590.1 466 65.2
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 1.5e-166 590.1 466 65.2
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.4e-166 589.0 403 76.4
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 4.4e-166 588.6 404 72.5
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.7e-165 585.5 397 76.8
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 4.8e-165 585.1 464 64.9
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 4.8e-165 585.1 464 64.9
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 1.1e-164 583.9 407 70.8
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.1e-164 582.0 415 74.2
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 7.0e-164 581.3 405 73.1
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 9.1e-164 580.9 404 72.0
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 7.7e-163 577.8 410 73.2
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 1.3e-162 577.0 401 76.1
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 1.3e-162 577.0 415 73.0
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 1.5e-161 573.5 406 70.2
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.9e-161 573.2 404 71.0
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 1.9e-161 573.2 405 71.1
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 2.5e-161 572.8 399 71.7
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 3.2e-161 572.4 404 69.3
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 9.5e-161 570.9 450 65.6
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 1.6e-160 570.1 404 69.1
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 2.1e-160 569.7 489 62.0
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 2.7e-160 569.3 432 70.1
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 2.7e-160 569.3 407 70.3
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 4.7e-160 568.5 407 70.5
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.8e-159 566.6 406 72.7
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 4.0e-159 565.5 405 70.1
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 5.2e-159 565.1 405 70.6
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 8.8e-159 564.3 403 69.0
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 1.2e-158 563.9 393 70.5
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 2.0e-158 563.1 401 68.3
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 3.4e-158 562.4 427 70.3
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 1.2e-155 553.9 403 71.0
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 4.5e-155 552.0 412 68.9
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.5e-150 537.0 398 66.8
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 1.3e-149 533.9 399 67.9
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.4e-148 530.4 398 65.8
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 3.3e-145 519.2 348 73.6
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 2.8e-144 516.2 411 66.9
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 5.2e-143 511.9 400 66.5
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 3.2e-140 502.7 396 62.4
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 2.0e-139 500.0 413 64.6
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.0e-138 497.7 414 61.8
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 1.7e-133 480.3 401 61.6
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 4.9e-133 478.8 333 69.4
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 3.5e-131 472.6 401 61.6
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 8.1e-120 434.9 372 59.9
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 8.9e-119 431.4 323 67.5
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 9.3e-116 421.4 390 56.2
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 3.5e-115 419.5 425 51.8
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 7.3e-113 411.8 391 54.7
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 4.0e-111 406.0 296 69.9
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 1.7e-109 400.6 314 63.7
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 1.9e-108 397.1 304 64.5
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 3.2e-108 396.4 239 78.2
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 2.1e-104 383.6 329 57.8
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 2.4e-103 380.2 297 64.3
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 1.2e-102 377.9 370 53.0
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 1.9e-100 370.5 340 54.7
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 4.2e-76 289.7 211 65.4
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 2.4e-63 247.3 151 80.1
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 3.6e-51 206.8 141 71.6
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 2.3e-42 177.6 401 31.4
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 1.8e-34 151.4 282 33.3
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 1.9e-23 114.8 103 56.3
MELO3C031411.2 Cucumis melo HOM05D000544 ORTHO05D169468 3.1e-10 70.9 38 81.6
MELO3C029166.2 Cucumis melo HOM05D005813 ORTHO05D009576 9.9e-09 65.9 37 75.7
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 6.4e-08 63.2 193 24.9
MELO3C030776.2 Cucumis melo HOM05D005813 ORTHO05D007310 2.4e-07 61.2 35 71.4
Lj1g0012756 Lotus japonicus HOM05D003006 ORTHO05D003438 1.2e-06 58.9 301 24.6
Medtr2g054920 Medicago truncatula HOM05D003006 ORTHO05D003438 2.7e-06 57.8 285 24.2
Hund06583 Selenicereus undatus HOM05D004669 ORTHO05D005767 7.8e-06 56.2 193 23.8
Sc08g0006880 Simmondsia chinensis HOM05D003006 ORTHO05D003438 7.8e-06 56.2 292 23.6


User provided reference genes

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