Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 6.8e-276 953.4 475 100.0
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 1.7e-231 805.8 476 85.7
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 1.5e-227 792.7 478 83.1
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 4.8e-213 744.6 475 78.5
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 9.9e-211 736.9 476 77.7
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 6.4e-210 734.2 482 77.6
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.1e-208 729.2 476 77.9
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 4.6e-208 728.0 476 75.4
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 7.9e-208 727.2 476 75.8
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.0e-207 726.9 478 77.2
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.8e-207 726.1 477 77.4
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.3e-207 725.7 476 75.2
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.7e-207 723.8 473 76.3
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.5e-206 723.0 474 77.6
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.5e-206 722.2 476 74.8
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 9.6e-206 720.3 475 75.4
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.6e-206 720.3 476 74.6
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 9.6e-206 720.3 476 76.5
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 9.6e-206 720.3 481 75.3
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 2.8e-205 718.8 478 76.8
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.1e-204 716.8 478 76.8
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 2.4e-204 715.7 478 76.2
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 4.0e-204 714.9 478 75.5
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 3.4e-203 711.8 471 75.8
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 5.8e-203 711.1 477 75.9
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 2.2e-202 709.1 476 75.2
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 2.9e-202 708.8 477 76.3
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 8.4e-202 707.2 481 75.3
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 4.2e-201 704.9 480 73.1
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 9.3e-201 703.7 475 72.4
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.1e-200 702.6 473 74.4
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.7e-200 702.2 475 73.3
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 2.7e-200 702.2 467 74.1
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 3.5e-200 701.8 478 74.5
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 6.0e-200 701.0 479 74.3
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.0e-199 700.3 470 73.8
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 1.3e-199 699.9 463 76.2
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 2.3e-199 699.1 456 75.9
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 3.0e-199 698.7 512 69.3
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 3.9e-199 698.4 512 69.7
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 8.7e-199 697.2 480 72.3
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 3.3e-198 695.3 474 71.5
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.7e-198 694.5 475 71.8
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 6.3e-197 691.0 483 72.7
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 8.2e-197 690.6 473 72.9
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.4e-196 689.9 472 71.4
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.4e-196 689.1 473 70.8
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 5.3e-196 688.0 476 71.8
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 5.3e-196 688.0 474 71.3
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 9.0e-196 687.2 477 73.2
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 9.0e-196 687.2 474 73.0
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 1.5e-195 686.4 476 70.6
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 5.9e-195 684.5 476 72.9
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 5.9e-195 684.5 467 72.8
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 5.0e-194 681.4 473 71.5
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.6e-192 676.4 473 72.5
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.0e-191 673.7 475 70.5
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 5.1e-191 671.4 477 69.4
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.9e-190 669.5 465 71.6
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 1.9e-190 669.5 477 68.3
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 3.3e-190 668.7 504 68.8
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.3e-189 666.8 471 73.0
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 3.7e-189 665.2 478 73.0
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 8.2e-189 664.1 476 71.8
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.4e-188 663.3 480 69.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 5.3e-188 661.4 471 70.1
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.0e-187 659.4 475 71.4
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 3.4e-187 658.7 471 72.4
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.3e-186 656.8 476 71.6
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 1.7e-186 656.4 471 69.4
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 2.2e-186 656.0 466 71.7
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 2.2e-186 656.0 463 69.5
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.1e-185 653.7 471 71.8
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 1.9e-185 652.9 477 71.7
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 5.5e-185 651.4 476 70.2
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 7.2e-185 651.0 476 70.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 9.4e-185 650.6 480 70.8
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 9.4e-185 650.6 480 70.8
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.0e-183 647.1 405 78.0
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 3.3e-182 642.1 494 67.4
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 9.7e-182 640.6 455 70.8
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 4.1e-180 635.2 475 68.8
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 7.7e-179 630.9 476 67.6
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.3e-178 630.2 416 74.3
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 8.5e-178 627.5 393 77.4
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 3.0e-167 592.4 393 75.6
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.8e-164 583.2 419 69.0
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 4.2e-161 572.0 469 61.0
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.0e-159 567.4 448 62.5
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 6.3e-157 558.1 454 61.9
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.1e-148 530.8 476 61.3
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 1.8e-148 530.0 333 80.8
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.6e-136 490.3 465 58.3
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 2.6e-134 483.0 356 68.0
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 4.4e-118 429.1 409 52.8
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.5e-115 419.5 420 51.9
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 5.6e-113 412.1 407 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 2.1e-112 410.2 408 52.7
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 3.8e-109 399.4 404 51.2
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 6.4e-93 345.5 417 44.1
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.1e-76 291.6 200 72.0
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 6.1e-67 259.2 187 69.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.4e-65 253.1 208 61.1
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.4e-65 253.1 208 61.1
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 3.1e-55 220.3 195 57.9
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 9.5e-28 129.0 88 75.0
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 5.6e-20 103.2 61 78.7


User provided reference genes

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