Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 3.8e-45 184.5 95 100.0
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 3.8e-45 184.5 95 100.0
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 4.2e-44 181.0 95 97.9
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 5.1e-42 174.1 95 95.8
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 1.8e-39 165.6 95 88.4
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 1.7e-32 142.5 95 80.0
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 2.2e-32 142.1 95 78.9
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.8e-32 141.7 95 76.8
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 3.7e-32 141.4 94 80.9
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 4.8e-32 141.0 92 76.1
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 6.3e-32 140.6 96 75.0
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 8.2e-32 140.2 96 77.1
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 1.1e-31 139.8 95 77.9
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 1.4e-31 139.4 95 74.7
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.4e-31 138.7 96 76.0
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 2.4e-31 138.7 95 74.7
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.4e-31 138.7 95 74.7
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 3.1e-31 138.3 95 74.7
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 3.1e-31 138.3 95 73.7
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.0e-31 137.1 95 73.7
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.0e-31 137.1 95 74.7
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 9.1e-31 136.7 96 75.0
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 9.1e-31 136.7 95 76.8
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.2e-30 136.3 95 72.6
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.2e-30 136.3 95 73.7
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 1.2e-30 136.3 95 72.6
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 2.0e-30 135.6 94 78.7
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.6e-30 135.2 95 76.8
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 2.6e-30 135.2 95 75.8
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 3.5e-30 134.8 95 73.7
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 4.5e-30 134.4 97 73.2
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 1.0e-29 133.3 95 71.6
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 2.2e-29 132.1 95 72.6
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.9e-29 131.7 95 74.7
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 3.8e-29 131.3 95 72.6
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 5.0e-29 131.0 97 72.2
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 8.5e-29 130.2 102 71.6
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 8.5e-29 130.2 86 75.6
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 8.5e-29 130.2 85 75.3
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.1e-28 129.8 95 67.4
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.9e-28 129.0 96 70.8
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 1.9e-28 129.0 91 73.6
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.9e-28 129.0 95 66.3
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 1.9e-28 129.0 93 74.2
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.5e-28 127.5 95 65.3
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 5.5e-28 127.5 95 65.3
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.6e-27 125.9 95 65.3
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 1.6e-27 125.9 95 68.4
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 2.7e-27 125.2 96 66.7
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 2.7e-27 125.2 102 71.6
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 1.8e-26 122.5 92 70.7
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 1.8e-26 122.5 95 64.2
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 1.8e-26 122.5 95 65.3
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 3.0e-26 121.7 96 66.7
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 6.7e-26 120.6 95 65.3
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 8.8e-26 120.2 101 65.3
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.5e-25 119.4 95 64.2
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.5e-25 119.4 95 64.2
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 2.6e-25 118.6 94 68.1
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 3.3e-25 118.2 102 61.8
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 4.4e-25 117.9 100 61.0
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 4.4e-25 117.9 102 66.7
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 5.7e-25 117.5 95 65.3
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 7.5e-25 117.1 101 60.4
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 7.5e-25 117.1 104 67.3
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 9.7e-25 116.7 96 66.7
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.7e-24 115.9 102 63.7
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 2.2e-24 115.5 102 63.7
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 3.7e-24 114.8 97 66.0
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 3.7e-24 114.8 102 60.8
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 6.3e-24 114.0 105 62.9
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 6.3e-24 114.0 105 63.8
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 2.4e-23 112.1 102 66.7
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 3.1e-23 111.7 76 75.0
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 4.1e-23 111.3 105 61.9
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 5.3e-23 110.9 97 64.9
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 7.0e-23 110.5 102 57.8
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 9.1e-23 110.2 103 60.2
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 1.2e-22 109.8 95 61.1
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 1.2e-22 109.8 95 63.2
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.6e-22 109.4 104 58.7
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.6e-22 109.4 107 62.6
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 2.0e-22 109.0 92 64.1
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 2.7e-22 108.6 103 60.2
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 2.7e-22 108.6 101 59.4
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 2.7e-22 108.6 104 57.7
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 3.5e-22 108.2 83 66.3
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 3.5e-22 108.2 102 56.9
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 5.9e-22 107.5 95 64.2
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 5.9e-22 107.5 104 57.7
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 7.7e-22 107.1 104 56.7
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 7.7e-22 107.1 102 59.8
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 7.7e-22 107.1 93 62.4
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 7.7e-22 107.1 100 56.0
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.0e-21 106.7 105 57.1
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 1.3e-21 106.3 106 56.6
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.2e-21 105.5 105 60.0
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 2.9e-21 105.1 102 61.8
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 3.8e-21 104.8 99 60.6
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 5.0e-21 104.4 103 58.3
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 6.5e-21 104.0 101 57.4
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 6.5e-21 104.0 85 65.9
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 8.5e-21 103.6 96 59.4
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 8.5e-21 103.6 72 73.6
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 8.5e-21 103.6 105 58.1
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.1e-20 103.2 106 56.6
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 1.1e-20 103.2 105 61.0
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.1e-20 103.2 105 57.1
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.5e-20 102.8 106 54.7
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 1.5e-20 102.8 105 58.1
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.5e-20 102.1 96 58.3
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 3.2e-20 101.7 96 57.3
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 5.5e-20 100.9 96 58.3
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 7.2e-20 100.5 96 56.2
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 7.2e-20 100.5 104 59.6
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 9.4e-20 100.1 101 54.5
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 1.2e-19 99.8 95 60.0
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.2e-19 99.8 90 61.1
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 1.2e-19 99.8 105 57.1
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 1.6e-19 99.4 96 59.4
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.6e-19 99.4 106 55.7
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 1.6e-19 99.4 80 68.8
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 2.7e-19 98.6 76 63.2
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 2.7e-19 98.6 102 57.8
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 3.6e-19 98.2 103 56.3
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 4.7e-19 97.8 96 56.2
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 6.1e-19 97.4 96 56.2
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 1.0e-18 96.7 99 56.6
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.4e-18 96.3 96 58.3
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.4e-18 96.3 95 54.7
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.3e-18 95.5 84 61.9
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.3e-18 95.5 96 55.2
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 2.3e-18 95.5 96 56.2
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.3e-18 95.5 96 55.2
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 3.0e-18 95.1 97 54.6
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 3.0e-18 95.1 97 55.7
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-18 95.1 97 55.7
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 3.0e-18 95.1 97 55.7
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.0e-18 95.1 95 54.7
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 4.0e-18 94.7 98 55.1
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 5.2e-18 94.4 97 55.7
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 5.2e-18 94.4 97 55.7
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 5.2e-18 94.4 97 55.7
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 6.8e-18 94.0 96 55.2
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 8.8e-18 93.6 97 54.6
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 8.8e-18 93.6 97 54.6
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.5e-17 92.8 83 57.8
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 2.0e-17 92.4 96 55.2
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.0e-17 92.4 105 54.3
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.4e-17 91.7 95 53.7
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 4.4e-17 91.3 96 54.2
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 4.4e-17 91.3 81 66.7
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 5.7e-17 90.9 97 54.6
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 5.7e-17 90.9 97 54.6
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 5.7e-17 90.9 95 56.8
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 7.5e-17 90.5 96 54.2
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 7.5e-17 90.5 99 54.5
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 9.8e-17 90.1 97 53.6
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 9.8e-17 90.1 97 53.6
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.3e-16 89.7 97 53.6
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-16 89.7 97 53.6
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.3e-16 89.7 97 53.6
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 2.2e-16 89.0 100 58.0
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 2.8e-16 88.6 97 52.6
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 2.8e-16 88.6 97 52.6
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 2.8e-16 88.6 103 56.3
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 6.3e-16 87.4 97 53.6
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 9.1e-15 83.6 88 55.7
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.7e-14 82.0 74 52.7
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-13 80.1 79 57.0
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-13 80.1 79 57.0
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-13 79.7 79 57.0
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 3.2e-12 75.1 80 56.2
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 5.5e-12 74.3 84 48.8
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 7.2e-12 73.9 77 54.5
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 7.2e-12 73.9 77 54.5
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 9.5e-12 73.6 75 56.0
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 1.2e-11 73.2 77 53.2
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 4.7e-11 71.2 78 51.3
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 4.7e-11 71.2 82 52.4
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 5.2e-10 67.8 84 45.2
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 8.8e-10 67.0 84 45.2
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 4.4e-09 64.7 76 53.9
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 2.2e-08 62.4 56 48.2
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 3.7e-08 61.6 66 50.0
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 3.5e-06 55.1 62 56.5


User provided reference genes

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