Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 1.2e-32 142.5 70 100.0
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 1.2e-32 142.5 70 100.0
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.1e-20 101.3 70 67.1
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 3.1e-20 101.3 70 67.1
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.2e-19 99.4 70 65.7
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 2.9e-18 94.7 70 62.9
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.4e-17 92.4 69 62.3
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.9e-17 92.0 70 64.3
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 3.2e-17 91.3 68 66.2
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 3.6e-16 87.8 70 61.4
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 4.7e-16 87.4 70 64.3
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.7e-16 87.4 70 64.3
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 6.1e-16 87.0 70 58.6
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-15 85.9 70 62.9
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 1.8e-15 85.5 66 60.6
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 2.3e-15 85.1 66 60.6
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 6.7e-15 83.6 70 61.4
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 6.7e-15 83.6 67 58.2
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 8.8e-15 83.2 70 62.9
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.8e-15 83.2 68 60.3
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 8.8e-15 83.2 65 58.5
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 8.8e-15 83.2 68 60.3
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 1.1e-14 82.8 70 57.1
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.1e-14 82.8 70 55.7
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.1e-14 82.8 69 55.1
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.1e-14 82.8 68 58.8
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 1.1e-14 82.8 70 58.6
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.0e-14 82.0 70 57.1
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.6e-14 81.6 68 58.8
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.6e-14 81.6 68 54.4
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 3.3e-14 81.3 70 55.7
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.4e-14 80.9 64 57.8
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 4.4e-14 80.9 70 57.1
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 4.4e-14 80.9 70 54.3
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 5.7e-14 80.5 70 52.9
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 5.7e-14 80.5 70 52.9
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 7.4e-14 80.1 72 56.9
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 7.4e-14 80.1 65 60.0
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.3e-13 79.3 61 63.9
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.7e-13 79.0 61 60.7
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.7e-13 79.0 70 55.7
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 2.2e-13 78.6 66 59.1
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 3.7e-13 77.8 70 54.3
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 3.7e-13 77.8 70 54.3
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 4.8e-13 77.4 64 54.7
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 4.8e-13 77.4 70 55.7
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 6.3e-13 77.0 68 58.8
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 6.3e-13 77.0 67 58.2
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 6.3e-13 77.0 72 55.6
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.2e-13 76.6 68 57.4
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 1.4e-12 75.9 65 53.8
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 1.8e-12 75.5 70 50.0
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 1.8e-12 75.5 67 53.7
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.4e-12 75.1 69 56.5
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 2.4e-12 75.1 70 52.9
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 2.4e-12 75.1 70 48.6
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 3.1e-12 74.7 68 55.9
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 5.3e-12 73.9 68 52.9
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 7.0e-12 73.6 66 53.0
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 2.6e-11 71.6 70 50.0
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.5e-11 71.2 62 58.1
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 5.9e-11 70.5 61 57.4
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 1.3e-10 69.3 70 48.6
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 2.2e-10 68.6 65 50.8
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 2.2e-10 68.6 70 48.6
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 6.5e-10 67.0 53 54.7
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 3.2e-09 64.7 65 50.8
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.2e-09 64.3 61 52.5
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.2e-09 64.3 68 48.5
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 7.2e-09 63.5 68 45.6
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 7.2e-09 63.5 62 41.9
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 9.4e-09 63.2 65 50.8
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 2.1e-08 62.0 74 50.0
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.7e-08 61.6 68 47.1
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 6.1e-08 60.5 69 47.8
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 5.2e-07 57.4 66 45.5
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.5e-06 55.8 65 46.2
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 5.7e-06 53.9 68 45.6


User provided reference genes

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