Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16330 Corylus avellana HOM05D000078 ORTHO05D000025 9.4e-46 186.4 89 100.0
Cfa002119 Carpinus fangiana HOM05D000078 ORTHO05D000025 1.1e-41 172.9 89 91.0
CiPaw.01G233500 Carya illinoinensis HOM05D000078 ORTHO05D000025 8.8e-20 100.1 75 62.7
CiPaw.02G147200 Carya illinoinensis HOM05D000078 ORTHO05D000025 1.3e-15 86.3 60 63.3
Potri.001G187500 Populus trichocarpa HOM05D000078 ORTHO05D000025 1.6e-13 79.3 70 57.1
Sabra01G0153100 Salix brachista HOM05D000078 ORTHO05D000025 3.6e-13 78.2 70 57.1
Potri.003G050700 Populus trichocarpa HOM05D000078 ORTHO05D000025 1.8e-12 75.9 73 54.8
Dinv30457 Davidia involucrata HOM05D000078 ORTHO05D000025 3.4e-11 71.6 76 46.1
Duzib192G0434 Durio zibethinus HOM05D000078 ORTHO05D000025 3.4e-11 71.6 70 50.0
Thecc.06G096700 Theobroma cacao HOM05D000078 ORTHO05D000025 3.4e-11 71.6 68 51.5
Nn3g18174 Nelumbo nucifera HOM05D000078 ORTHO05D000025 4.4e-11 71.2 74 51.4
Prupe.3G062800 Prunus persica HOM05D000078 ORTHO05D000025 4.4e-11 71.2 64 59.4
TAR624G0122 Trochodendron aralioides HOM05D000078 ORTHO05D000025 4.4e-11 71.2 71 54.9
Duzib160G0552 Durio zibethinus HOM05D000078 ORTHO05D000025 9.8e-11 70.1 71 47.9
Duzib235G0696 Durio zibethinus HOM05D000078 ORTHO05D000025 9.8e-11 70.1 70 51.4
Hma1.2p1_0393F.1_g143050 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 1.3e-10 69.7 71 52.1
Manes.04G131900 Manihot esculenta HOM05D000078 ORTHO05D000025 1.7e-10 69.3 75 50.7
CANSAT56G0548 Cannabis sativa HOM05D000078 ORTHO05D000025 2.2e-10 68.9 80 47.5
TAR102G0004 Trochodendron aralioides HOM05D000078 ORTHO05D000025 2.8e-10 68.6 74 52.7
Lalb_Chr25g0280091 Lupinus albus HOM05D000078 ORTHO05D000025 3.7e-10 68.2 79 51.9
MD09G1206700 Malus domestica HOM05D000078 ORTHO05D000025 4.9e-10 67.8 61 57.4
Gohir.D03G059500 Gossypium hirsutum HOM05D000078 ORTHO05D000025 6.3e-10 67.4 74 44.6
Gorai.003G063500 Gossypium raimondii HOM05D000078 ORTHO05D000025 6.3e-10 67.4 74 44.6
arahy.Tifrunner.gnm1.ann1.YAEJ5M Arachis hypogaea HOM05D000078 ORTHO05D000025 8.3e-10 67.0 63 57.1
MD17G1187300 Malus domestica HOM05D000078 ORTHO05D000025 1.4e-09 66.2 64 53.1
TAR626G1888 Trochodendron aralioides HOM05D000078 ORTHO05D000025 1.4e-09 66.2 74 50.0
arahy.Tifrunner.gnm1.ann1.X2S259 Arachis hypogaea HOM05D000078 ORTHO05D000025 1.8e-09 65.9 63 55.6
Gohir.D05G132800 Gossypium hirsutum HOM05D000078 ORTHO05D000025 1.8e-09 65.9 70 45.7
Gorai.009G136500 Gossypium raimondii HOM05D000078 ORTHO05D000025 1.8e-09 65.9 70 45.7
Dinv14262 Davidia involucrata HOM05D000078 ORTHO05D002768 2.4e-09 65.5 71 46.5
Glyma.07G017300 Glycine max HOM05D000078 ORTHO05D000025 2.4e-09 65.5 77 45.5
Sabra03G0028100 Salix brachista HOM05D000078 ORTHO05D000025 3.1e-09 65.1 70 48.6
Manes.11G035600 Manihot esculenta HOM05D000078 ORTHO05D000025 4.1e-09 64.7 70 48.6
Nn2g11626 Nelumbo nucifera HOM05D000078 ORTHO05D000025 4.1e-09 64.7 72 45.8
Gohir.A02G118900 Gossypium hirsutum HOM05D000078 ORTHO05D000025 5.4e-09 64.3 70 41.4
CSS0022119 Camellia sinensis var. sinensis HOM05D000078 ORTHO05D000025 7.0e-09 63.9 69 47.8
MBI04_g27059_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D000025 7.0e-09 63.9 79 40.5
TAR383G0719 Trochodendron aralioides HOM05D000078 ORTHO05D000025 7.0e-09 63.9 67 50.7
Gohir.A05G128300 Gossypium hirsutum HOM05D000078 ORTHO05D000025 1.2e-08 63.2 70 44.3
QL05p020863 Quercus lobata HOM05D000078 ORTHO05D000025 1.6e-08 62.8 72 54.2
Glyma.13G355700 Glycine max HOM05D000078 ORTHO05D000025 3.5e-08 61.6 57 59.6
Hma1.2p1_0049F.1_g028620 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 5.9e-08 60.8 72 45.8
Glyma.08G202300 Glycine max HOM05D000078 ORTHO05D000025 1.3e-07 59.7 81 44.4
Oeu050611.1 Olea europaea HOM05D000078 ORTHO05D000025 1.3e-07 59.7 67 41.8
Sopen12g022660 Solanum pennellii HOM05D000078 ORTHO05D000025 1.3e-07 59.7 74 40.5
CiPaw.04G159700 Carya illinoinensis HOM05D000078 ORTHO05D000025 2.3e-07 58.9 71 40.8
Gohir.A06G092900 Gossypium hirsutum HOM05D000078 ORTHO05D000025 2.3e-07 58.9 71 42.3
Gohir.D06G092500 Gossypium hirsutum HOM05D000078 ORTHO05D000025 2.3e-07 58.9 71 42.3
Gorai.010G106600 Gossypium raimondii HOM05D000078 ORTHO05D000025 2.3e-07 58.9 71 42.3
Ciclev10027587m.g Citrus clementina HOM05D000078 ORTHO05D000025 3.9e-07 58.2 82 43.9
Solyc06g066540.1 Solanum lycopersicum HOM05D000078 ORTHO05D000025 5.0e-07 57.8 72 45.8
Actinidia30276 Actinidia chinensis HOM05D000078 ORTHO05D000025 1.1e-06 56.6 68 45.6
Haze_25802 Corylus avellana HOM05D000078 ORTHO05D000025 1.1e-06 56.6 73 42.5
Thecc.09G045000 Theobroma cacao HOM05D000078 ORTHO05D000025 1.1e-06 56.6 71 42.3
Atru.chr1.3472 Acer truncatum HOM05D000078 ORTHO05D000025 1.5e-06 56.2 70 51.4
Hma1.2p1_0945F.1_g240280 Hydrangea macrophylla HOM05D000078 ORTHO05D000025 1.5e-06 56.2 71 42.3
Rhsim02G0178800 Rhododendron simsii HOM05D000078 ORTHO05D000025 1.9e-06 55.8 74 39.2
Rhsim12G0202000 Rhododendron simsii HOM05D000078 ORTHO05D000025 1.9e-06 55.8 65 43.1
CANSAT25G0471 Cannabis sativa HOM05D000078 ORTHO05D000025 4.3e-06 54.7 62 43.5
Sopen06g024810 Solanum pennellii HOM05D000078 ORTHO05D000025 4.3e-06 54.7 72 43.1
CiPaw.07G204500 Carya illinoinensis HOM05D000078 ORTHO05D000025 5.6e-06 54.3 71 42.3
Duzib187G0317 Durio zibethinus HOM05D000078 ORTHO05D000025 5.6e-06 54.3 71 39.4
FvH4_6g32030 Fragaria vesca HOM05D000078 ORTHO05D000025 5.6e-06 54.3 45 62.2
FAN02G3307 Fragaria x ananassa HOM05D000078 ORTHO05D000025 5.6e-06 54.3 45 62.2
FAN05G5745 Fragaria x ananassa HOM05D000078 ORTHO05D000025 5.6e-06 54.3 45 62.2
FAN14G0211 Fragaria x ananassa HOM05D000078 ORTHO05D000025 5.6e-06 54.3 45 62.2
CiPaw.03G226800 Carya illinoinensis HOM05D000078 ORTHO05D000025 7.3e-06 53.9 64 42.2
Eucgr.C03785 Eucalyptus grandis HOM05D000078 ORTHO05D000025 7.3e-06 53.9 74 44.6
Lj5C55T11 Lonicera japonica HOM05D000078 ORTHO05D000025 7.3e-06 53.9 55 47.3
Lj2g0001036 Lotus japonicus HOM05D000078 ORTHO05D000025 7.3e-06 53.9 72 33.3
Nitab4.5_0003167g0010 Nicotiana tabacum HOM05D000078 ORTHO05D000025 7.3e-06 53.9 72 43.1
Phvul.005G170600 Phaseolus vulgaris HOM05D000078 ORTHO05D000025 7.3e-06 53.9 58 56.9
Rhsim08G0226100 Rhododendron simsii HOM05D000078 ORTHO05D000025 7.3e-06 53.9 72 43.1
VMungo0331G1107 Vigna mungo HOM05D000078 ORTHO05D000025 7.3e-06 53.9 76 38.2


User provided reference genes

Program Settings