Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16283 Corylus avellana HOM05D012052 ORTHO05D013566 7.8e-189 663.7 345 100.0
Haze_23958 Corylus avellana HOM05D012052 ORTHO05D013566 1.9e-33 147.5 271 39.5
Haze_25171 Corylus avellana HOM05D012052 ORTHO05D013566 1.9e-30 137.5 169 50.9
Haze_02285 Corylus avellana HOM05D012052 ORTHO05D013566 7.1e-25 119.0 198 41.4
Haze_02565 Corylus avellana HOM05D012052 ORTHO05D013566 1.9e-22 110.9 191 45.0
Haze_17863 Corylus avellana HOM05D012052 ORTHO05D013566 3.7e-21 106.7 161 46.6
Haze_17886 Corylus avellana HOM05D012052 ORTHO05D013566 5.3e-20 102.8 203 41.9
Haze_05910 Corylus avellana HOM05D012052 ORTHO05D013566 2.5e-17 94.0 107 52.3
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 2.5e-17 94.0 288 29.9
Haze_08252 Corylus avellana HOM05D009546 ORTHO05D014580 2.1e-16 90.9 128 32.8
Haze_23482 Corylus avellana HOM05D012052 ORTHO05D013566 4.6e-16 89.7 127 44.9
CiPaw.13G120800 Carya illinoinensis HOM05D000003 ORTHO05D013566 6.0e-16 89.4 117 40.2
Haze_12949 Corylus avellana HOM05D000003 ORTHO05D000167 3.7e-13 80.1 109 33.0
Haze_27263 Corylus avellana HOM05D000003 ORTHO05D000167 4.8e-13 79.7 128 36.7
Haze_13888 Corylus avellana HOM05D009031 ORTHO05D000167 1.8e-12 77.8 127 30.7
CiPaw.07G069100 Carya illinoinensis HOM05D000003 ORTHO05D000167 4.1e-12 76.6 111 34.2
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 6.9e-12 75.9 156 33.3
Haze_16573 Corylus avellana HOM05D001354 ORTHO05D002582 9.0e-12 75.5 99 38.4
CiPaw.03G190200 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.2e-11 75.1 121 33.1
Haze_05999 Corylus avellana HOM05D017217 ORTHO05D013566 1.5e-11 74.7 201 27.4
CiPaw.16G069900 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.6e-11 73.9 123 29.3
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-11 72.8 102 38.2
Haze_08824 Corylus avellana HOM05D009546 ORTHO05D013566 1.3e-10 71.6 116 37.1
Atru.chr5.1907 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-10 70.1 102 32.4
CiPaw.13G119800 Carya illinoinensis HOM05D000003 ORTHO05D013566 3.8e-10 70.1 101 33.7
Haze_09308 Corylus avellana HOM05D001621 ORTHO05D000167 3.8e-10 70.1 98 32.7
TWI73G0607 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.5e-10 68.9 98 34.7
CiPaw.03G161500 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-09 68.6 94 33.0
CiPaw.09G167800 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-09 68.6 94 34.0
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.1e-09 68.6 250 26.0
Haze_16043 Corylus avellana HOM05D032658 ORTHO05D000167 1.1e-09 68.6 359 27.9
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 1.4e-09 68.2 57 47.4
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 1.9e-09 67.8 96 35.4
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-09 67.8 121 32.2
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.9e-09 67.8 122 32.8
Haze_07769 Corylus avellana HOM05D000003 ORTHO05D000167 3.2e-09 67.0 91 38.5
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-09 67.0 109 32.1
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.5e-09 66.2 122 32.0
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 5.5e-09 66.2 109 29.4
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.5e-09 66.2 131 31.3
CiPaw.07G081000 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.2e-09 65.9 108 33.3
CiPaw.09G152300 Carya illinoinensis HOM05D000003 ORTHO05D000167 7.2e-09 65.9 127 29.1
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-09 65.5 133 30.1
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-09 65.5 133 30.1
HPP92_024917 Vanilla planifolia HOM05D011558 ORTHO05D013586 9.3e-09 65.5 117 33.3
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 1.2e-08 65.1 127 31.5
Atru.chr1.1940 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-08 64.7 90 32.2
Atru.chr7.662 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-08 64.7 101 30.7
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 1.6e-08 64.7 131 29.8
CiPaw.05G068400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.6e-08 64.7 131 29.0
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-08 64.7 133 30.8
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-08 64.7 132 31.1
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.1e-08 64.3 108 34.3
CANSAT11G0402 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-08 63.9 93 36.6
CiPaw.01G080900 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.7e-08 63.9 119 30.3
vmacro12951 Vaccinium macrocarpon HOM05D002252 ORTHO05D002451 2.7e-08 63.9 158 27.8
Atru.chr13.1037 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-08 63.5 115 33.0
CiPaw.05G213600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.6e-08 63.5 106 31.1
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.6e-08 63.5 128 30.5
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 6.1e-08 62.8 120 30.0
Atru.chr13.1831 Acer truncatum HOM05D000003 ORTHO05D000167 7.9e-08 62.4 103 30.1
Atru.chr9.1193 Acer truncatum HOM05D000003 ORTHO05D000167 7.9e-08 62.4 101 31.7
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.9e-08 62.4 122 30.3
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 7.9e-08 62.4 127 28.3
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 62.0 118 30.5
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 62.0 92 33.7
CANSAT78G0319 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-07 62.0 112 30.4
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.0e-07 62.0 127 29.1
QL05p053348 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-07 62.0 110 32.7
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-07 61.6 101 32.7
Atru.chr9.1321 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-07 61.6 102 30.4
Haze_16342 Corylus avellana HOM05D032658 ORTHO05D000167 1.4e-07 61.6 62 41.9
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-07 61.6 94 38.3
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.4e-07 61.6 121 28.1
Atru.chr11.1419 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-07 61.2 91 34.1
Atru.chr13.1676 Acer truncatum HOM05D000003 ORTHO05D000006 1.8e-07 61.2 115 32.2
Atru.chr8.1648 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-07 61.2 124 33.1
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.8e-07 61.2 121 28.1
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-07 60.8 111 34.2
Atru.chr3.2627 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-07 60.8 102 33.3
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-07 60.8 92 34.8
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-07 60.5 114 29.8
Atru.ctg727.2 Acer truncatum HOM05D002863 ORTHO05D009913 3.0e-07 60.5 91 36.3
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-07 60.5 107 34.6
CiPaw.15G109000 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.0e-07 60.5 102 34.3
Haze_20521 Corylus avellana HOM05D028630 ORTHO05D000167 3.0e-07 60.5 45 48.9
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 60.1 98 32.7
CANSAT80G2259 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-07 60.1 92 32.6
CiPaw.01G096600 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.9e-07 60.1 124 26.6
Haze_08588 Corylus avellana HOM05D004092 ORTHO05D013566 3.9e-07 60.1 58 50.0
TWI12G1409 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.9e-07 60.1 132 31.8
Atru.chr10.1139 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-07 59.7 99 34.3
CANSAT01G2496 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-07 59.7 109 34.9
CiPaw.15G048300 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.1e-07 59.7 112 31.2
Haze_01518 Corylus avellana HOM05D000003 ORTHO05D044804 5.1e-07 59.7 67 37.3
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 5.1e-07 59.7 112 31.2
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-07 59.3 110 30.0
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 6.7e-07 59.3 106 33.0
Atru.chr8.965 Acer truncatum HOM05D000003 ORTHO05D000167 6.7e-07 59.3 114 33.3
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.7e-07 59.3 179 27.4
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-07 58.9 124 33.1
Atru.chr6.490 Acer truncatum HOM05D000003 ORTHO05D000004 8.8e-07 58.9 108 34.3
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 8.8e-07 58.9 124 29.0
CANSAT11G2485 Cannabis sativa HOM05D000003 ORTHO05D000167 8.8e-07 58.9 103 34.0
CANSAT25G0727 Cannabis sativa HOM05D000003 ORTHO05D000004 8.8e-07 58.9 91 29.7
CiPaw.02G051300 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.8e-07 58.9 95 32.6
CiPaw.15G062400 Carya illinoinensis HOM05D000003 ORTHO05D000167 8.8e-07 58.9 96 31.2
Atru.chr8.605 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 58.5 94 34.0
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-06 58.5 97 33.0
TWI18G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-06 58.5 104 32.7
Atru.chr11.1735 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-06 58.2 97 29.9
CANSAT11G1274 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-06 58.2 95 32.6
CiPaw.01G090400 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.5e-06 58.2 119 28.6
CiPaw.15G035300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-06 58.2 112 29.5
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-06 57.8 131 29.0
Atru.chr10.1041 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-06 57.4 95 33.7
Atru.chr5.1665 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-06 57.4 110 32.7
CANSAT21G1343 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-06 57.4 105 31.4
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.5e-06 57.4 101 32.7
QL08p029218 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-06 57.4 98 31.6
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 57.0 116 31.0
Atru.chr2.49 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-06 57.0 124 25.8
Haze_08483 Corylus avellana HOM05D042742 ORTHO05D000167 3.3e-06 57.0 197 24.4
QL04p086866 Quercus lobata HOM05D000003 ORTHO05D000167 3.3e-06 57.0 109 30.3
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-06 56.6 132 28.0
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-06 56.6 114 30.7
Ah.01g010200 Amaranthus hybridus HOM05D000003 ORTHO05D000167 4.3e-06 56.6 114 29.8
Aqoxy1G01582 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-06 56.6 117 34.2
Atru.chr10.669 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-06 56.2 105 30.5
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 5.7e-06 56.2 114 28.1
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.7e-06 56.2 100 32.0
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 7.4e-06 55.8 105 33.3
Atru.chr5.2695 Acer truncatum HOM05D000003 ORTHO05D000167 7.4e-06 55.8 115 28.7
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-06 55.8 128 27.3
Aa31LG9G1700 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.4e-06 55.8 113 29.2
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 7.4e-06 55.8 117 29.1
Haze_27770 Corylus avellana HOM05D009546 ORTHO05D013566 7.4e-06 55.8 80 33.8
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 7.4e-06 55.8 99 31.3
Atru.chr1.805 Acer truncatum HOM05D000003 ORTHO05D000167 9.7e-06 55.5 115 30.4
Atru.chr2.1508 Acer truncatum HOM05D000003 ORTHO05D000006 9.7e-06 55.5 103 32.0
Cfa015056 Carpinus fangiana HOM05D018234 ORTHO05D011454 9.7e-06 55.5 49 49.0
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 9.7e-06 55.5 104 33.7


User provided reference genes

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