Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16281 Corylus avellana HOM05D003731 ORTHO05D004429 2.8e-67 258.5 129 100.0
Cfa002143 Carpinus fangiana HOM05D003731 ORTHO05D004429 3.4e-57 224.9 120 94.2
CiPaw.01G089700 Carya illinoinensis HOM05D003731 ORTHO05D004429 2.7e-54 215.3 120 89.2
Dinv20345 Davidia involucrata HOM05D003731 ORTHO05D008196 3.6e-54 214.9 122 88.5
QL05p083882 Quercus lobata HOM05D003731 ORTHO05D004429 1.4e-53 213.0 112 94.6
Sabra08G0003400 Salix brachista HOM05D003731 ORTHO05D004429 1.4e-53 213.0 120 87.5
Potri.008G006400 Populus trichocarpa HOM05D003731 ORTHO05D004429 1.8e-53 212.6 120 87.5
GSVIVG01029573001 Vitis vinifera HOM05D003731 ORTHO05D004429 3.0e-53 211.8 120 87.5
Manes.16G046301 Manihot esculenta HOM05D003731 ORTHO05D004429 5.2e-53 211.1 120 86.7
Cc04_g00280 Coffea canephora HOM05D003731 ORTHO05D004429 6.7e-53 210.7 120 87.5
Eucgr.F04024 Eucalyptus grandis HOM05D003731 ORTHO05D004429 6.7e-53 210.7 120 85.8
Actinidia31131 Actinidia chinensis HOM05D003731 ORTHO05D004429 8.8e-53 210.3 120 86.7
CANSAT01G0693 Cannabis sativa HOM05D003731 ORTHO05D004429 2.0e-52 209.1 119 85.7
Prupe.3G020500 Prunus persica HOM05D003731 ORTHO05D004429 5.7e-52 207.6 120 86.7
Lalb_Chr01g0011841 Lupinus albus HOM05D003731 ORTHO05D004429 7.4e-52 207.2 120 83.3
CSS0017795 Camellia sinensis var. sinensis HOM05D003731 ORTHO05D004429 9.7e-52 206.8 120 86.7
DCAR_022617 Daucus carota HOM05D003731 ORTHO05D004429 9.7e-52 206.8 120 85.8
Nn8g40740 Nelumbo nucifera HOM05D003731 ORTHO05D004429 1.3e-51 206.5 119 86.6
RcHm_v2.0_Chr2g0149681 Rosa chinensis HOM05D003731 ORTHO05D004429 1.3e-51 206.5 120 86.7
Dinv37787 Davidia involucrata HOM05D003731 ORTHO05D004429 1.7e-51 206.1 120 85.8
Oeu001813.1 Olea europaea HOM05D003731 ORTHO05D004429 1.7e-51 206.1 120 85.0
TWI12G0642 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 1.7e-51 206.1 120 83.3
MSTRG.22505 Avicennia marina HOM05D003731 ORTHO05D004429 2.2e-51 205.7 120 84.2
Potri.010G252300 Populus trichocarpa HOM05D003731 ORTHO05D004429 2.2e-51 205.7 120 85.0
Solyc06g063290.3 Solanum lycopersicum HOM05D003731 ORTHO05D004429 4.8e-51 204.5 112 90.2
Sopen06g022750 Solanum pennellii HOM05D003731 ORTHO05D004429 4.8e-51 204.5 112 90.2
HanXRQChr02g0032091 Helianthus annuus HOM05D003731 ORTHO05D004429 6.3e-51 204.1 120 84.2
MD09G1161400 Malus domestica HOM05D003731 ORTHO05D004429 1.1e-50 203.4 120 85.0
PGR102G1715 Punica granatum HOM05D003731 ORTHO05D004429 1.1e-50 203.4 120 80.8
Rhsim08G0249300 Rhododendron simsii HOM05D003731 ORTHO05D004429 1.1e-50 203.4 120 83.3
Sed0015920 Sechium edule HOM05D003731 ORTHO05D004429 1.1e-50 203.4 119 84.0
COL.COLO4_31180 Corchorus olitorius HOM05D003731 ORTHO05D004429 1.4e-50 203.0 120 81.7
MELO3C024281.2 Cucumis melo HOM05D003731 ORTHO05D004429 1.4e-50 203.0 119 84.0
Migut.I01187 Erythranthe guttata HOM05D003731 ORTHO05D004429 1.4e-50 203.0 120 81.7
Hma1.2p1_1111F.1_g258350 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 1.4e-50 203.0 120 83.3
PGSC0003DMG401026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 1.4e-50 203.0 112 89.3
Lj5A23G26 Lonicera japonica HOM05D003731 ORTHO05D004429 1.8e-50 202.6 118 88.1
Nitab4.5_0002354g0040 Nicotiana tabacum HOM05D003731 ORTHO05D004429 1.8e-50 202.6 112 88.4
A03p42050 Brassica napus HOM05D003731 ORTHO05D004429 2.4e-50 202.2 121 82.6
CARHR041710 Cardamine hirsuta HOM05D003731 ORTHO05D004429 2.4e-50 202.2 112 86.6
CsaV3_7G033680 Cucumis sativus L. HOM05D003731 ORTHO05D004429 2.4e-50 202.2 119 84.0
BraA03t13359Z Brassica rapa HOM05D003731 ORTHO05D004429 3.1e-50 201.8 121 81.8
MD17G1147200 Malus domestica HOM05D003731 ORTHO05D004429 3.1e-50 201.8 120 83.3
TAR625G0125 Trochodendron aralioides HOM05D003731 ORTHO05D004429 4.1e-50 201.4 119 84.9
PGSC0003DMG402026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 5.3e-50 201.1 111 89.2
Lsat_1_v5_gn_1_39481 Lactuca sativa HOM05D003731 ORTHO05D004429 7.0e-50 200.7 119 83.2
arahy.Tifrunner.gnm1.ann1.T57K28 Arachis hypogaea HOM05D003731 ORTHO05D004429 9.1e-50 200.3 121 85.1
C01p43100 Brassica napus HOM05D003731 ORTHO05D004429 9.1e-50 200.3 110 88.2
FAN09G0689 Fragaria x ananassa HOM05D003731 ORTHO05D004429 9.1e-50 200.3 120 84.2
Hund05680 Selenicereus undatus HOM05D003731 ORTHO05D004429 9.1e-50 200.3 112 88.4
C03p51470 Brassica napus HOM05D003731 ORTHO05D004429 1.2e-49 199.9 121 80.2
Thhalv10020874m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 1.2e-49 199.9 110 88.2
Hma1.2p1_0517F.1_g170700 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 1.6e-49 199.5 111 90.1
THA.LOC104817922 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 1.6e-49 199.5 120 80.8
AL3G35080 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 2.0e-49 199.1 110 87.3
CAN.G308.12 Capsicum annuum HOM05D003731 ORTHO05D004429 2.0e-49 199.1 112 87.5
Duzib235G1293 Durio zibethinus HOM05D003731 ORTHO05D004429 2.0e-49 199.1 120 82.5
FAN05G3538 Fragaria x ananassa HOM05D003731 ORTHO05D004429 2.0e-49 199.1 119 84.9
AL1G59450 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 2.6e-49 198.7 111 85.6
BcaC01g03525 Brassica carinata HOM05D003731 ORTHO05D004429 2.6e-49 198.7 121 80.2
BcaC09g49052 Brassica carinata HOM05D003731 ORTHO05D004429 2.6e-49 198.7 110 87.3
BolC3t17432H Brassica oleracea HOM05D003731 ORTHO05D004429 2.6e-49 198.7 121 80.2
BraA05t21647Z Brassica rapa HOM05D003731 ORTHO05D004429 2.6e-49 198.7 110 88.2
FvH4_6g37120 Fragaria vesca HOM05D003731 ORTHO05D004429 3.5e-49 198.4 120 84.2
FAN02G2868 Fragaria x ananassa HOM05D003731 ORTHO05D004429 3.5e-49 198.4 120 84.2
FAN14G5835 Fragaria x ananassa HOM05D003731 ORTHO05D004429 3.5e-49 198.4 120 84.2
Lj9A542G26 Lonicera japonica HOM05D003731 ORTHO05D004429 3.5e-49 198.4 118 84.7
Nitab4.5_0003757g0080 Nicotiana tabacum HOM05D003731 ORTHO05D004429 3.5e-49 198.4 115 87.0
Nitab4.5_0006975g0010 Nicotiana tabacum HOM05D003731 ORTHO05D004429 3.5e-49 198.4 120 80.8
AT3G21140 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 4.5e-49 198.0 110 86.4
Gohir.D02G107500 Gossypium hirsutum HOM05D003731 ORTHO05D004429 4.5e-49 198.0 120 80.8
Gorai.005G122100 Gossypium raimondii HOM05D003731 ORTHO05D004429 4.5e-49 198.0 120 80.8
SGA_v2.0_scaffold71G23998 Striga asiatica HOM05D003731 ORTHO05D004429 4.5e-49 198.0 120 80.0
Glyma.08G221400 Glycine max HOM05D003731 ORTHO05D004429 5.9e-49 197.6 120 83.3
VMungo0647G1366 Vigna mungo HOM05D003731 ORTHO05D004429 5.9e-49 197.6 120 83.3
arahy.Tifrunner.gnm1.ann1.C9Z78F Arachis hypogaea HOM05D003731 ORTHO05D004429 7.7e-49 197.2 121 84.3
BcaB06g26184 Brassica carinata HOM05D003731 ORTHO05D004429 7.7e-49 197.2 110 87.3
BcaC05g28253 Brassica carinata HOM05D003731 ORTHO05D004429 7.7e-49 197.2 110 87.3
A01p33720 Brassica napus HOM05D003731 ORTHO05D004429 7.7e-49 197.2 108 88.9
A05p27580 Brassica napus HOM05D003731 ORTHO05D004429 7.7e-49 197.2 110 87.3
C05p42680 Brassica napus HOM05D003731 ORTHO05D004429 7.7e-49 197.2 110 87.3
BolC5t32990H Brassica oleracea HOM05D003731 ORTHO05D004429 7.7e-49 197.2 110 87.3
HPP92_028311 Vanilla planifolia HOM05D003731 ORTHO05D004429 7.7e-49 197.2 119 80.7
Nitab4.5_0001691g0190 Nicotiana tabacum HOM05D003731 ORTHO05D004429 1.0e-48 196.8 120 80.8
Carub.0001s4041 Capsella rubella HOM05D003731 ORTHO05D004429 1.3e-48 196.4 112 82.1
vmacro18751 Vaccinium macrocarpon HOM05D003731 ORTHO05D004429 1.3e-48 196.4 120 82.5
BcaB04g19144 Brassica carinata HOM05D003731 ORTHO05D004429 1.7e-48 196.1 112 85.7
Ca_20505_v3 Cicer arietinum L. HOM05D003731 ORTHO05D004429 1.7e-48 196.1 120 82.5
Sp1g38210 Schrenkiella parvula HOM05D003731 ORTHO05D004429 1.7e-48 196.1 112 83.9
SGA_v2.0_scaffold122G33277 Striga asiatica HOM05D003731 ORTHO05D004429 1.7e-48 196.1 120 79.2
AT1G51560 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 2.2e-48 195.7 112 83.0
BolC1t04257H Brassica oleracea HOM05D003731 ORTHO05D004429 2.2e-48 195.7 110 86.4
Lj3g0007083 Lotus japonicus HOM05D003731 ORTHO05D004429 2.2e-48 195.7 120 82.5
Peaxi162Scf00207g01628 Petunia axillaris HOM05D003731 ORTHO05D004429 2.2e-48 195.7 107 89.7
TWI18G0412 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 2.2e-48 195.7 111 86.5
BraA01t03485Z Brassica rapa HOM05D003731 ORTHO05D004429 2.9e-48 195.3 108 88.0
Thhalv10011555m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 2.9e-48 195.3 112 84.8
Medtr4g007990 Medicago truncatula HOM05D003731 ORTHO05D004429 2.9e-48 195.3 120 82.5
Phvul.008G254200 Phaseolus vulgaris HOM05D003731 ORTHO05D004429 2.9e-48 195.3 112 87.5
Sp3g19100 Schrenkiella parvula HOM05D003731 ORTHO05D004429 2.9e-48 195.3 111 86.5
ATR0626G101 Amborella trichopoda HOM05D003731 ORTHO05D004429 3.8e-48 194.9 124 79.8
Glyma.07G020600 Glycine max HOM05D003731 ORTHO05D004429 5.0e-48 194.5 111 88.3
THA.LOC104798773 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 5.0e-48 194.5 112 83.9
Atru.chr1.2721 Acer truncatum HOM05D003731 ORTHO05D004429 6.5e-48 194.1 120 78.3
CDE05G0121 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 6.5e-48 194.1 117 84.6
Aa31LG10G3210 Aethionema arabicum HOM05D003731 ORTHO05D004429 8.5e-48 193.7 110 83.6
PSO170G0363 Papaver somniferum HOM05D003731 ORTHO05D004429 8.5e-48 193.7 110 87.3
TPR.G24561 Trifolium pratense HOM05D003731 ORTHO05D004429 8.5e-48 193.7 120 82.5
CDE05G0113 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 1.5e-47 193.0 121 81.0
Gohir.D05G114600 Gossypium hirsutum HOM05D003731 ORTHO05D004429 1.5e-47 193.0 120 79.2
Gorai.009G118800 Gossypium raimondii HOM05D003731 ORTHO05D004429 1.5e-47 193.0 120 79.2
MBI16_g05829_MAGBIO Magnolia biondii HOM05D003731 ORTHO05D004429 1.5e-47 193.0 114 84.2
BcaB02g11256 Brassica carinata HOM05D003731 ORTHO05D004429 3.2e-47 191.8 112 81.2
Gohir.A05G114300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 4.2e-47 191.4 120 78.3
PSO063G0738 Papaver somniferum HOM05D003731 ORTHO05D004429 4.2e-47 191.4 110 86.4
EL10Ac7g18173 Beta vulgaris HOM05D003731 ORTHO05D004429 7.2e-47 190.7 120 79.2
Peaxi162Scf00038g02535 Petunia axillaris HOM05D003731 ORTHO05D004429 7.2e-47 190.7 115 83.5
Thecc.06G059900 Theobroma cacao HOM05D003731 ORTHO05D004429 9.4e-47 190.3 120 81.7
Oeu050745.3 Olea europaea HOM05D003731 ORTHO05D004429 1.2e-46 189.9 120 79.2
A05p19510 Brassica napus HOM05D003731 ORTHO05D004429 1.6e-46 189.5 112 82.1
BraA05t20855Z Brassica rapa HOM05D003731 ORTHO05D004429 1.6e-46 189.5 112 82.1
Ah.08g217760 Amaranthus hybridus HOM05D003731 ORTHO05D008196 2.1e-46 189.1 119 79.8
AUR62001353 Chenopodium quinoa HOM05D003731 ORTHO05D004429 2.1e-46 189.1 112 83.9
BcaC08g43921 Brassica carinata HOM05D003731 ORTHO05D004429 3.6e-46 188.3 112 81.2
C06p13140 Brassica napus HOM05D003731 ORTHO05D004429 3.6e-46 188.3 112 81.2
BolC6t36470H Brassica oleracea HOM05D003731 ORTHO05D004429 3.6e-46 188.3 112 81.2
Aqoxy7G02835 Aquilegia oxysepala HOM05D003731 ORTHO05D004429 8.0e-46 187.2 109 84.4
Zm00001eb232310 Zea mays HOM05D003731 ORTHO05D004429 8.0e-46 187.2 121 78.5
AUR62025651 Chenopodium quinoa HOM05D003731 ORTHO05D004429 1.0e-45 186.8 112 83.0
SEGI_04052 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 1.0e-45 186.8 120 78.3
Os02g0148400 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 1.4e-45 186.4 120 76.7
HPP92_010289 Vanilla planifolia HOM05D003731 ORTHO05D004429 1.8e-45 186.0 121 76.0
Os08g0517500 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 5.2e-45 184.5 116 79.3
CARHR097000 Cardamine hirsuta HOM05D003731 ORTHO05D004429 6.7e-45 184.1 111 82.9
Sabra10G0196300 Salix brachista HOM05D003731 ORTHO05D004429 6.7e-45 184.1 159 62.9
Oeu049642.2 Olea europaea HOM05D003731 ORTHO05D004429 8.8e-45 183.7 120 77.5
unitig_32.g11007 Utricularia gibba HOM05D003731 ORTHO05D004429 8.8e-45 183.7 120 76.7
Ciclev10025825m.g Citrus clementina HOM05D003731 ORTHO05D004429 1.5e-44 183.0 120 75.0
Duzib192G0075 Durio zibethinus HOM05D003731 ORTHO05D004429 9.7e-44 180.3 120 78.3
Aa31LG8G7840 Aethionema arabicum HOM05D003731 ORTHO05D004429 1.3e-43 179.9 110 78.2
SEGI_14249 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 6.3e-43 177.6 111 79.3
Zm00001eb035800 Zea mays HOM05D003731 ORTHO05D004429 8.2e-43 177.2 117 76.1
HanXRQChr10g0311171 Helianthus annuus HOM05D003731 ORTHO05D004429 1.1e-42 176.8 119 71.4
Lsat_1_v5_gn_5_137321 Lactuca sativa HOM05D003731 ORTHO05D004429 1.8e-42 176.0 110 78.2
ECA234G1217 Erigeron canadensis HOM05D003731 ORTHO05D004429 2.4e-42 175.6 111 74.8
ClCG09G001660 Citrullus lanatus HOM05D003731 ORTHO05D004429 4.1e-42 174.9 119 76.5
Lsat_1_v5_gn_8_80840 Lactuca sativa HOM05D003731 ORTHO05D004429 7.0e-42 174.1 110 77.3
BcaB04g20609 Brassica carinata HOM05D003731 ORTHO05D004429 7.2e-39 164.1 110 74.5
AagrBONN_evm.TU.Sc2ySwM_228.2381 Anthoceros agrestis HOM05D003731 ORTHO05D004429 6.1e-38 161.0 118 66.9
Cpa.g.sc461.2 Carica papaya HOM05D003731 ORTHO05D004429 1.0e-37 160.2 120 70.0
SMO364G0508 Selaginella moellendorffii HOM05D003731 ORTHO05D004429 3.0e-37 158.7 120 65.8
Pp3c19_5780 Physcomitrium patens HOM05D003731 ORTHO05D004429 4.4e-36 154.8 111 66.7
Mapoly0153s0003 Marchantia polymorpha HOM05D003731 ORTHO05D004429 7.5e-36 154.1 115 64.3
Carub.0003s2104 Capsella rubella HOM05D003731 ORTHO05D004429 3.7e-35 151.8 82 91.5
Gohir.A02G090300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 2.4e-34 149.1 93 79.6
BcaNung05301 Brassica carinata HOM05D003731 ORTHO05D004429 5.4e-34 147.9 102 73.5
Pp3c18_21250 Physcomitrium patens HOM05D003731 ORTHO05D004429 9.1e-34 147.1 111 65.8
Sc12g0011120 Simmondsia chinensis HOM05D003731 ORTHO05D004429 2.0e-33 146.0 88 81.8
Hund18606 Selenicereus undatus HOM05D003731 ORTHO05D004429 4.5e-33 144.8 111 70.3
BcaC08g44499 Brassica carinata HOM05D003731 ORTHO05D004429 1.0e-32 143.7 78 88.5
C06p19510 Brassica napus HOM05D003731 ORTHO05D004429 1.0e-32 143.7 78 88.5
BraA02t08409Z Brassica rapa HOM05D003731 ORTHO05D004429 2.1e-30 136.0 78 84.6
Ah.15g094360 Amaranthus hybridus HOM05D003731 ORTHO05D004429 3.0e-29 132.1 111 63.1
SEGI_29649 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 8.8e-29 130.6 111 61.3
arahy.Tifrunner.gnm1.ann1.7JFF3X Arachis hypogaea HOM05D003731 ORTHO05D004429 3.7e-27 125.2 129 58.9
HPP92_015382 Vanilla planifolia HOM05D003731 ORTHO05D004429 1.1e-26 123.6 74 83.8
CBR_g66806 Chara braunii HOM05D003731 ORTHO05D004429 9.2e-26 120.6 112 57.1
CARHR113330 Cardamine hirsuta HOM05D003731 ORTHO05D004429 4.6e-17 91.7 63 74.6
Cre12.g520200 Chlamydomonas reinhardtii HOM05D003731 ORTHO05D004429 8.9e-13 77.4 88 44.3
PRCOL_00002787 Prasinoderma coloniale HOM05D003731 ORTHO05D004429 8.9e-13 77.4 117 35.9
HPP92_028546 Vanilla planifolia HOM05D003731 ORTHO05D004429 1.2e-12 77.0 46 73.9
MCO09G402 Micromonas commoda HOM05D003731 ORTHO05D004429 9.8e-12 73.9 124 35.5
MCO13G417 Micromonas commoda HOM05D003731 ORTHO05D004429 5.4e-10 68.2 125 31.2
Carub.0043s0002 Capsella rubella HOM05D003731 ORTHO05D004429 1.7e-08 63.2 66 59.1


User provided reference genes

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