Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16268 Corylus avellana HOM05D001408 ORTHO05D001312 1.1e-118 429.9 208 100.0
QL05p084007 Quercus lobata HOM05D001408 ORTHO05D001312 1.1e-09 67.8 31 100.0
Gohir.A06G118400 Gossypium hirsutum HOM05D001408 ORTHO05D001312 2.5e-09 66.6 32 96.9
MD09G1164700 Malus domestica HOM05D001408 ORTHO05D001312 2.5e-09 66.6 32 96.9
MD17G1163500 Malus domestica HOM05D001408 ORTHO05D001312 2.5e-09 66.6 32 96.9
Atru.chr1.2696 Acer truncatum HOM05D001408 ORTHO05D001312 3.3e-09 66.2 32 96.9
FvH4_6g37040 Fragaria vesca HOM05D001408 ORTHO05D001312 5.6e-09 65.5 32 93.8
FAN05G1663 Fragaria x ananassa HOM05D001408 ORTHO05D001312 5.6e-09 65.5 32 93.8
FAN09G1717 Fragaria x ananassa HOM05D001408 ORTHO05D001312 5.6e-09 65.5 32 93.8
Gorai.010G142500 Gossypium raimondii HOM05D001408 ORTHO05D001312 7.4e-09 65.1 32 93.8
Duzib235G1422 Durio zibethinus HOM05D001408 ORTHO05D001312 9.6e-09 64.7 32 90.6
Prupe.3G022100 Prunus persica HOM05D001408 ORTHO05D001312 9.6e-09 64.7 32 93.8
RcHm_v2.0_Chr2g0149591 Rosa chinensis HOM05D001408 ORTHO05D001312 9.6e-09 64.7 32 93.8
CANSAT01G1469 Cannabis sativa HOM05D001408 ORTHO05D001312 1.6e-08 63.9 32 93.8
FAN14G2979 Fragaria x ananassa HOM05D001408 ORTHO05D001312 1.6e-08 63.9 31 93.5
Thecc.06G059100 Theobroma cacao HOM05D001408 ORTHO05D001312 1.6e-08 63.9 32 93.8
TAR383G0246 Trochodendron aralioides HOM05D001408 ORTHO05D001312 1.6e-08 63.9 32 90.6
CiPaw.01G090500 Carya illinoinensis HOM05D001408 ORTHO05D001312 2.8e-08 63.2 32 90.6
Lj3g0017779 Lotus japonicus HOM05D001408 ORTHO05D001312 2.8e-08 63.2 32 93.8
Sed0023760 Sechium edule HOM05D001408 ORTHO05D001312 2.8e-08 63.2 32 90.6
ClCG07G014630 Citrullus lanatus HOM05D001408 ORTHO05D001312 3.7e-08 62.8 32 90.6
GSVIVG01029539001 Vitis vinifera HOM05D001408 ORTHO05D001312 3.7e-08 62.8 32 93.8
TPR.G29279 Trifolium pratense HOM05D001408 ORTHO05D001312 4.8e-08 62.4 33 90.9
arahy.Tifrunner.gnm1.ann1.S69VLQ Arachis hypogaea HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
Glyma.13G372600 Glycine max HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
Glyma.15G001100 Glycine max HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
Lalb_Chr14g0376191 Lupinus albus HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
Psat5g307080 Pisum sativum HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
VMungo1080G0918 Vigna mungo HOM05D001408 ORTHO05D001312 6.2e-08 62.0 32 93.8
Ciclev10026281m.g Citrus clementina HOM05D001408 ORTHO05D001312 8.1e-08 61.6 32 87.5
CsaV3_3G030540 Cucumis sativus L. HOM05D001408 ORTHO05D001312 8.1e-08 61.6 32 87.5
COL.COLO4_31172 Corchorus olitorius HOM05D001408 ORTHO05D001312 1.4e-07 60.8 32 90.6
Actinidia00645 Actinidia chinensis HOM05D001408 ORTHO05D001312 1.8e-07 60.5 32 87.5
Actinidia31126 Actinidia chinensis HOM05D001408 ORTHO05D001312 1.8e-07 60.5 32 87.5
Eucgr.F04027 Eucalyptus grandis HOM05D001408 ORTHO05D001312 1.8e-07 60.5 32 90.6
PGR102G1464 Punica granatum HOM05D001408 ORTHO05D001312 1.8e-07 60.5 32 90.6
TWI12G0945 Tripterygium wilfordii HOM05D001408 ORTHO05D001312 1.8e-07 60.5 32 90.6
Cc04_g00210 Coffea canephora HOM05D001408 ORTHO05D001312 2.4e-07 60.1 32 81.2
Medtr2g105850 Medicago truncatula HOM05D001408 ORTHO05D001312 2.4e-07 60.1 32 90.6
Phvul.005G185000 Phaseolus vulgaris HOM05D001408 ORTHO05D001312 2.4e-07 60.1 32 90.6
SalBow6G5270 Salvia bowleyana HOM05D001408 ORTHO05D001312 2.4e-07 60.1 32 90.6
Hma1.2p1_0517F.1_g170760 Hydrangea macrophylla HOM05D001408 ORTHO05D001312 3.1e-07 59.7 32 87.5
Hma1.2p1_0517F.1_g170770 Hydrangea macrophylla HOM05D001408 ORTHO05D001312 3.1e-07 59.7 32 87.5
Rhsim12G0215100 Rhododendron simsii HOM05D001408 ORTHO05D001312 3.1e-07 59.7 32 84.4
MBI13_g34037_MAGBIO Magnolia biondii HOM05D001408 ORTHO05D001312 4.0e-07 59.3 32 87.5
Oeu061153.1 Olea europaea HOM05D001408 ORTHO05D001312 4.0e-07 59.3 32 90.6
Sed0025199 Sechium edule HOM05D001408 ORTHO05D001312 4.0e-07 59.3 32 87.5
AUR62025660 Chenopodium quinoa HOM05D001408 ORTHO05D001312 5.3e-07 58.9 60 51.7
DCAR_022612 Daucus carota HOM05D001408 ORTHO05D001312 6.9e-07 58.5 32 87.5
Lsat_1_v5_gn_1_39440 Lactuca sativa HOM05D001408 ORTHO05D001312 6.9e-07 58.5 32 84.4
SGA_v2.0_scaffold71G23991 Striga asiatica HOM05D001408 ORTHO05D001312 6.9e-07 58.5 32 87.5
vmacro20671 Vaccinium macrocarpon HOM05D001408 ORTHO05D001312 9.0e-07 58.2 32 84.4
CSS0001108 Camellia sinensis var. sinensis HOM05D001408 ORTHO05D001312 1.2e-06 57.8 32 84.4
CSS0048323 Camellia sinensis var. sinensis HOM05D001408 ORTHO05D001312 1.2e-06 57.8 32 84.4
Nitab4.5_0005664g0010 Nicotiana tabacum HOM05D001408 ORTHO05D001312 1.2e-06 57.8 33 90.9
Oeu062491.1 Olea europaea HOM05D001408 ORTHO05D001312 1.2e-06 57.8 32 87.5
Manes.06G177100 Manihot esculenta HOM05D001408 ORTHO05D001312 1.5e-06 57.4 32 87.5
MSTRG.10880 Avicennia marina HOM05D001408 ORTHO05D001312 2.6e-06 56.6 31 83.9
Migut.I01193 Erythranthe guttata HOM05D001408 ORTHO05D001312 2.6e-06 56.6 32 87.5
Manes.14G007900 Manihot esculenta HOM05D001408 ORTHO05D001312 2.6e-06 56.6 32 87.5
MSTRG.22502 Avicennia marina HOM05D001408 ORTHO05D001312 3.4e-06 56.2 32 84.4
Nitab4.5_0005739g0040 Nicotiana tabacum HOM05D001408 ORTHO05D001312 4.5e-06 55.8 33 87.9
Peaxi162Scf00038g02531 Petunia axillaris HOM05D001408 ORTHO05D001312 4.5e-06 55.8 33 87.9
AUR62001344 Chenopodium quinoa HOM05D001408 ORTHO05D001312 5.8e-06 55.5 32 81.2
PSO063G1684 Papaver somniferum HOM05D001408 ORTHO05D001312 7.6e-06 55.1 32 78.1
PSO170G1908 Papaver somniferum HOM05D001408 ORTHO05D001312 7.6e-06 55.1 32 78.1
ATR0626G025 Amborella trichopoda HOM05D001408 ORTHO05D001312 9.9e-06 54.7 32 78.1


User provided reference genes

Program Settings