Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 4.1e-51 204.5 110 100.0
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.6e-21 105.5 68 89.7
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 2.2e-20 102.4 68 86.8
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 6.0e-18 94.4 67 82.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 5.1e-17 91.3 68 72.1
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 2.5e-16 89.0 68 70.6
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.6e-15 86.3 69 78.3
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 4.7e-15 84.7 68 73.5
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 6.2e-15 84.3 68 66.2
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 6.9e-14 80.9 68 72.1
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 6.9e-14 80.9 71 74.6
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 9.0e-14 80.5 77 71.4
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.2e-13 80.1 68 67.6
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.2e-13 80.1 68 66.2
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 2.0e-13 79.3 68 63.2
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 3.4e-13 78.6 67 64.2
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 5.8e-13 77.8 67 68.7
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 5.8e-13 77.8 68 67.6
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.7e-12 76.3 67 62.7
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 2.9e-12 75.5 65 67.7
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 2.9e-12 75.5 68 70.6
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 4.9e-12 74.7 67 59.7
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 4.9e-12 74.7 67 59.7
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 4.9e-12 74.7 68 60.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 1.4e-11 73.2 68 67.6
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 1.9e-11 72.8 68 60.3
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 3.2e-11 72.0 73 64.4
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 7.1e-11 70.9 69 69.6
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 9.3e-11 70.5 68 66.2
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 9.3e-11 70.5 72 66.7
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 2.7e-10 68.9 70 60.0
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 3.5e-10 68.6 65 58.5
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 6.0e-10 67.8 65 66.2
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 1.0e-09 67.0 69 66.7
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 3.0e-09 65.5 69 71.0
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 3.9e-09 65.1 68 57.4
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 5.1e-09 64.7 65 70.8
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 6.6e-09 64.3 68 51.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 1.1e-08 63.5 63 57.1
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 1.9e-08 62.8 68 58.8
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 5.6e-08 61.2 69 60.9
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 1.3e-07 60.1 44 70.5
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 1.6e-07 59.7 71 64.8
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.1e-07 59.3 68 50.0
Lj5C22T9 Lonicera japonica HOM05D004479 ORTHO05D029161 2.1e-07 59.3 69 63.8
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.6e-07 58.5 73 64.4
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.6e-07 58.5 73 64.4
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 3.6e-07 58.5 73 64.4
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 3.6e-07 58.5 68 58.8
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.4e-06 56.6 68 52.9
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 1.4e-06 56.6 69 50.7
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.8e-06 56.2 42 71.4
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.8e-06 56.2 67 52.2
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.4e-06 55.8 73 63.0
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 3.1e-06 55.5 60 63.3
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 6.9e-06 54.3 75 49.3


User provided reference genes

Program Settings