Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 1.4e-148 529.6 271 100.0
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 7.7e-91 337.8 270 67.4
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 2.6e-86 322.8 274 63.9
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.1e-84 317.4 272 64.3
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 4.1e-84 315.5 272 63.6
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 4.1e-84 315.5 272 63.6
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.3e-84 315.1 272 63.6
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 7.0e-84 314.7 271 64.2
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 4.5e-83 312.0 274 62.8
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 2.2e-82 309.7 274 62.0
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 5.0e-82 308.5 269 63.2
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 5.0e-82 308.5 277 61.0
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 8.5e-82 307.8 276 62.3
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 9.4e-81 304.3 278 60.8
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 6.1e-80 301.6 277 59.9
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 6.7e-79 298.1 277 59.2
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 6.7e-79 298.1 273 58.6
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 2.0e-78 296.6 273 58.2
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 2.6e-78 296.2 273 59.3
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 7.4e-78 294.7 273 57.5
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 9.7e-78 294.3 270 60.0
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 2.2e-77 293.1 276 58.7
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 2.8e-77 292.7 272 57.4
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 3.7e-77 292.4 276 58.3
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 4.8e-77 292.0 276 58.7
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 1.1e-76 290.8 273 57.5
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 1.4e-76 290.4 273 58.2
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 1.4e-76 290.4 276 58.0
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 1.8e-76 290.0 277 57.8
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 3.1e-76 289.3 273 57.9
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 3.1e-76 289.3 278 58.3
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 5.3e-76 288.5 271 58.3
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 2.0e-75 286.6 279 57.3
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 4.5e-75 285.4 272 57.0
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.3e-74 283.9 275 55.6
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 1.3e-74 283.9 280 57.1
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 2.2e-74 283.1 273 58.2
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 3.8e-74 282.3 275 57.5
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 5.0e-74 282.0 277 57.0
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 5.5e-73 278.5 270 55.2
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 9.4e-73 277.7 277 56.0
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 1.6e-72 276.9 269 56.5
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 4.7e-72 275.4 269 56.1
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 4.7e-72 275.4 277 54.9
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 8.0e-72 274.6 270 57.4
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 1.0e-71 274.2 275 54.5
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 1.0e-71 274.2 275 54.5
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.4e-71 273.9 277 55.2
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 4.0e-71 272.3 276 55.4
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 6.7e-71 271.6 276 55.1
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 2.0e-70 270.0 276 54.0
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 2.0e-70 270.0 279 53.8
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 1.3e-69 267.3 269 53.5
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 2.2e-69 266.5 272 54.4
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 3.7e-69 265.8 270 55.2
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 4.8e-69 265.4 269 53.5
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.1e-68 264.2 271 53.1
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.4e-68 263.8 271 53.5
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.8e-68 263.5 271 53.1
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 1.8e-68 263.5 291 52.6
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 2.4e-68 263.1 269 53.2
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 5.3e-68 261.9 272 51.1
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 9.1e-68 261.2 271 53.1
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.2e-67 260.8 275 52.7
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 2.7e-67 259.6 271 52.8
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 3.5e-67 259.2 265 53.6
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.0e-66 257.7 272 52.6
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 2.2e-66 256.5 279 52.0
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 2.9e-66 256.1 257 54.9
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 5.0e-66 255.4 282 51.4
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 5.5e-65 251.9 268 52.2
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 2.7e-64 249.6 262 53.8
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 2.7e-64 249.6 257 53.3
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 6.1e-64 248.4 277 52.0
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 1.8e-63 246.9 269 51.7
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 2.0e-62 243.4 276 50.4
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 2.0e-62 243.4 260 53.1
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 1.1e-57 227.6 254 52.0
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 5.5e-57 225.3 277 47.3
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 3.5e-51 206.1 194 60.8
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 3.6e-48 196.1 268 43.7
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 2.6e-46 189.9 217 52.1
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 2.2e-45 186.8 207 52.7
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 8.3e-45 184.9 264 44.7
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 3.0e-42 176.4 271 42.1
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.0e-42 176.4 113 79.6
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 3.9e-42 176.0 197 52.3
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 3.6e-40 169.5 211 46.9
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.1e-39 167.9 118 72.9
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.5e-38 164.1 104 80.8
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 4.9e-37 159.1 104 76.0
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 4.1e-36 156.0 270 37.0
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 1.6e-35 154.1 112 67.0
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 2.7e-35 153.3 268 36.6
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 4.6e-35 152.5 104 72.1
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 9.5e-33 144.8 272 34.2
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 1.2e-30 137.9 100 71.0
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 2.0e-30 137.1 181 46.4
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 6.4e-29 132.1 81 79.0
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 1.5e-25 120.9 79 74.7
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 1.8e-23 114.0 266 32.7
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 4.9e-21 105.9 290 29.3
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 1.5e-09 67.8 82 43.9
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 4.3e-09 66.2 79 43.0


User provided reference genes

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