Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 1.4e-159 566.2 282 100.0
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 1.4e-159 566.2 282 100.0
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 3.1e-79 299.3 282 61.7
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 4.9e-72 275.4 286 58.0
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 5.4e-71 271.9 285 56.1
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 5.4e-71 271.9 282 55.3
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 7.0e-71 271.6 283 53.0
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 2.0e-70 270.0 286 55.9
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 2.7e-70 269.6 307 53.1
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 7.8e-70 268.1 280 54.6
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 1.0e-69 267.7 280 55.7
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 3.9e-69 265.8 287 56.1
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 6.6e-69 265.0 288 54.5
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 6.6e-69 265.0 286 54.9
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 8.6e-69 264.6 285 54.0
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 1.1e-68 264.2 279 53.0
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 1.5e-68 263.8 280 54.6
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 1.5e-68 263.8 280 53.6
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 1.5e-68 263.8 282 55.7
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 1.5e-68 263.8 286 56.3
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 4.3e-68 262.3 280 54.3
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 4.3e-68 262.3 281 54.4
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 7.3e-68 261.5 282 54.6
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 9.5e-68 261.2 286 54.2
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 9.5e-68 261.2 282 54.6
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 2.1e-67 260.0 285 54.4
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 2.8e-67 259.6 285 55.1
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 2.8e-67 259.6 286 53.1
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 3.6e-67 259.2 286 55.2
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 6.2e-67 258.5 283 52.7
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 8.0e-67 258.1 284 54.9
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 1.8e-66 256.9 281 52.3
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 1.8e-66 256.9 282 52.1
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 2.3e-66 256.5 286 53.5
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 3.1e-66 256.1 282 53.5
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 3.1e-66 256.1 283 55.5
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 4.0e-66 255.8 284 51.8
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 4.0e-66 255.8 281 52.3
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 5.2e-66 255.4 281 53.0
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 6.8e-66 255.0 284 50.7
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 1.2e-65 254.2 282 54.3
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 1.5e-65 253.8 286 53.1
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 2.0e-65 253.4 280 52.9
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 2.0e-65 253.4 286 53.1
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 2.0e-65 253.4 288 52.4
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 4.4e-65 252.3 301 49.5
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 4.4e-65 252.3 286 53.5
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 5.8e-65 251.9 286 52.8
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 5.8e-65 251.9 284 53.2
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 9.8e-65 251.1 280 53.2
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 9.8e-65 251.1 280 53.2
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 1.3e-64 250.8 281 50.9
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 1.7e-64 250.4 285 50.5
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 1.7e-64 250.4 287 51.9
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 2.2e-64 250.0 280 52.9
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 4.9e-64 248.8 286 53.1
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 4.9e-64 248.8 286 52.1
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 4.9e-64 248.8 280 52.5
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 4.9e-64 248.8 280 52.5
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 6.4e-64 248.4 286 52.4
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 8.3e-64 248.1 279 52.7
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 8.3e-64 248.1 282 51.1
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 8.3e-64 248.1 283 51.2
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 1.1e-63 247.7 280 52.5
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 1.4e-63 247.3 280 51.1
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 1.4e-63 247.3 282 52.1
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 1.9e-63 246.9 279 51.3
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 1.9e-63 246.9 283 51.2
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 2.4e-63 246.5 280 52.1
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 1.2e-62 244.2 283 51.6
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.6e-62 243.8 280 50.7
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 2.0e-62 243.4 283 49.5
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 2.0e-62 243.4 282 50.0
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 2.7e-62 243.0 280 51.8
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 2.7e-62 243.0 284 49.3
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 3.5e-62 242.7 280 51.4
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 3.5e-62 242.7 271 51.3
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 4.6e-62 242.3 284 49.6
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 6.0e-62 241.9 285 49.8
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 1.0e-61 241.1 281 50.2
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 1.3e-61 240.7 280 50.7
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 1.1e-60 237.7 275 52.0
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 1.1e-60 237.7 265 52.1
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 1.5e-60 237.3 271 52.4
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 1.9e-60 236.9 283 49.1
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 2.5e-60 236.5 285 49.5
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 3.6e-59 232.6 319 46.1
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 4.0e-58 229.2 280 48.9
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 8.9e-58 228.0 281 47.7
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 1.2e-57 227.6 281 48.8
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 2.0e-57 226.9 281 48.4
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 2.6e-57 226.5 286 49.0
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 3.4e-57 226.1 266 50.4
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 7.5e-57 224.9 285 47.7
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 6.4e-56 221.9 281 48.0
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 2.4e-55 219.9 268 48.9
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 3.2e-55 219.5 281 47.3
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 3.1e-50 203.0 282 42.9
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 4.4e-49 199.1 282 42.9
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 6.4e-48 195.3 282 42.6
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 1.9e-47 193.7 280 43.9
Aa31LG4G2750 Aethionema arabicum HOM05D006122 ORTHO05D007426 1.4e-42 177.6 269 42.4
MBI13_g36947_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D007426 1.6e-38 164.1 161 57.8
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 2.1e-38 163.7 281 40.2
Sc01g0007910 Simmondsia chinensis HOM05D006122 ORTHO05D007426 3.5e-38 162.9 160 55.0
Aqoxy301s003 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 3.0e-37 159.8 160 53.8
Duzib160G0673 Durio zibethinus HOM05D006122 ORTHO05D007426 5.1e-37 159.1 161 58.4
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 5.6e-36 155.6 278 36.0
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.1e-34 151.4 156 53.8
SalBow5G2173 Salvia bowleyana HOM05D006122 ORTHO05D007426 5.3e-34 149.1 176 50.6
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 6.9e-34 148.7 160 53.1
FAN09G0799 Fragaria x ananassa HOM05D006122 ORTHO05D007426 2.9e-32 143.3 143 54.5
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 1.4e-31 141.0 281 32.4
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 5.4e-31 139.0 154 47.4
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 1.1e-28 131.3 151 49.7
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 3.3e-28 129.8 154 46.1
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 1.3e-27 127.9 67 85.1
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 2.6e-25 120.2 275 30.2
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 1.6e-22 110.9 61 80.3
BcaB03g14993 Brassica carinata HOM05D006122 ORTHO05D007426 1.8e-21 107.5 74 68.9
Nn1g08880 Nelumbo nucifera HOM05D006122 ORTHO05D007426 5.1e-21 105.9 55 87.3
Actinidia31156 Actinidia chinensis HOM05D006122 ORTHO05D007426 1.0e-16 91.7 60 70.0
AagrBONN_evm.TU.Sc2ySwM_362.2335 Anthoceros agrestis HOM05D006122 ORTHO05D007426 4.9e-16 89.4 168 33.3
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 3.0e-13 80.1 255 24.3
MCO13G567 Micromonas commoda HOM05D006122 ORTHO05D007426 6.9e-10 68.9 305 24.9
MBI14_g30672_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D015226 2.1e-06 57.4 51 52.9
MBI02_g29873_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D015226 7.9e-06 55.5 40 65.0


User provided reference genes

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