Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16052 Corylus avellana HOM05D033627 ORTHO05D034205 5.0e-69 264.2 125 100.0
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 1.2e-22 110.2 121 44.6
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 4.3e-20 101.7 114 40.4
Haze_27263 Corylus avellana HOM05D000003 ORTHO05D000167 2.0e-17 92.8 113 38.1
Haze_23663 Corylus avellana HOM05D018234 ORTHO05D000167 3.4e-17 92.0 117 39.3
Haze_18012 Corylus avellana HOM05D022711 ORTHO05D000167 2.2e-16 89.4 122 37.7
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 3.7e-16 88.6 90 47.8
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 1.2e-14 83.6 114 36.8
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 7.8e-14 80.9 112 37.5
Haze_06429 Corylus avellana HOM05D009031 ORTHO05D000167 1.7e-13 79.7 117 35.9
Haze_12823 Corylus avellana HOM05D016039 ORTHO05D000167 1.7e-13 79.7 102 38.2
Haze_19830 Corylus avellana HOM05D009031 ORTHO05D000167 8.6e-13 77.4 122 32.8
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.1e-12 77.0 104 35.6
Cfa002516 Carpinus fangiana HOM05D033627 ORTHO05D034205 1.9e-12 76.3 65 52.3
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 5.6e-12 74.7 105 35.2
Haze_19825 Corylus avellana HOM05D009031 ORTHO05D000167 5.6e-12 74.7 119 31.1
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 7.3e-12 74.3 106 33.0
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 9.5e-12 73.9 107 40.2
Cfa002259 Carpinus fangiana HOM05D012052 ORTHO05D000167 1.2e-11 73.6 88 36.4
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 2.1e-11 72.8 105 35.2
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 2.8e-11 72.4 106 34.9
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 8.1e-11 70.9 122 32.0
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.1e-11 70.9 103 30.1
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.3e-10 69.3 103 35.9
QL05p017661 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-10 69.3 90 38.9
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-10 68.6 105 34.3
Duzib170G1141 Durio zibethinus HOM05D000003 ORTHO05D000167 4.0e-10 68.6 106 34.9
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 6.8e-10 67.8 93 36.6
Haze_16617 Corylus avellana HOM05D009031 ORTHO05D000167 6.8e-10 67.8 107 31.8
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.8e-10 67.8 99 35.4
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.8e-10 67.8 115 31.3
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 8.9e-10 67.4 104 33.7
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-09 66.2 99 34.3
Cfa008696 Carpinus fangiana HOM05D016039 ORTHO05D022266 2.6e-09 65.9 69 42.0
Cfa011332 Carpinus fangiana HOM05D000140 ORTHO05D000087 2.6e-09 65.9 66 42.4
CiPaw.11G073400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.6e-09 65.9 117 34.2
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.6e-09 65.9 120 30.0
Haze_05517 Corylus avellana HOM05D016039 ORTHO05D000167 2.6e-09 65.9 81 40.7
Cfa020893 Carpinus fangiana HOM05D018234 ORTHO05D000167 3.4e-09 65.5 111 36.9
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.4e-09 65.5 99 33.3
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.4e-09 65.5 99 33.3
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 4.4e-09 65.1 94 36.2
Haze_05735 Corylus avellana HOM05D009031 ORTHO05D000167 4.4e-09 65.1 104 36.5
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 5.8e-09 64.7 88 37.5
Haze_11698 Corylus avellana HOM05D009031 ORTHO05D000167 5.8e-09 64.7 115 31.3
Haze_19933 Corylus avellana HOM05D000003 ORTHO05D000167 5.8e-09 64.7 118 31.4
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 5.8e-09 64.7 105 35.2
Haze_13587 Corylus avellana HOM05D032658 ORTHO05D000167 9.9e-09 63.9 104 33.7
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 9.9e-09 63.9 105 35.2
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-08 63.5 105 35.2
RcHm_v2.0_Chr6g0289791 Rosa chinensis HOM05D000003 ORTHO05D011454 1.3e-08 63.5 91 40.7
Haze_27611 Corylus avellana HOM05D009031 ORTHO05D000167 1.7e-08 63.2 108 34.3
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-08 62.8 109 33.9
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.9e-08 62.4 107 31.8
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-08 62.0 104 33.7
Cfa015444 Carpinus fangiana HOM05D016039 ORTHO05D022266 3.7e-08 62.0 64 42.2
FAN09G1860 Fragaria x ananassa HOM05D000003 ORTHO05D011454 4.9e-08 61.6 93 35.5
FAN01G2727 Fragaria x ananassa HOM05D000003 ORTHO05D011454 6.4e-08 61.2 103 34.0
QL07p038035 Quercus lobata HOM05D000003 ORTHO05D000167 6.4e-08 61.2 105 30.5
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 8.3e-08 60.8 90 37.8
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.3e-08 60.8 100 35.0
CiPaw.08G150600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-07 60.5 113 38.1
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 1.1e-07 60.5 108 32.4
Haze_18383 Corylus avellana HOM05D009031 ORTHO05D000167 1.4e-07 60.1 96 35.4
Atru.chr13.2597 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 115 31.3
Ca_26082_v3 Cicer arietinum L. HOM05D009584 ORTHO05D011650 1.9e-07 59.7 98 35.7
Haze_13888 Corylus avellana HOM05D009031 ORTHO05D000167 1.9e-07 59.7 107 31.8
Haze_18233 Corylus avellana HOM05D009031 ORTHO05D000167 1.9e-07 59.7 118 28.0
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 1.9e-07 59.7 106 28.3
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 59.7 105 31.4
Haze_05522 Corylus avellana HOM05D009031 ORTHO05D000167 2.4e-07 59.3 99 31.3
Haze_25213 Corylus avellana HOM05D000335 ORTHO05D001251 2.4e-07 59.3 111 35.1
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.4e-07 59.3 91 39.6
Cfa013017 Carpinus fangiana HOM05D018234 ORTHO05D000167 3.2e-07 58.9 111 34.2
Cfa021502 Carpinus fangiana HOM05D033627 ORTHO05D034205 3.2e-07 58.9 43 55.8
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-07 58.5 109 33.0
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-07 58.5 109 33.0
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-07 58.5 117 29.1
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-07 58.5 123 30.9
Haze_07382 Corylus avellana HOM05D012052 ORTHO05D000167 4.1e-07 58.5 71 35.2
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 5.4e-07 58.2 105 32.4
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 7.1e-07 57.8 99 34.3
Duzib147G0364 Durio zibethinus HOM05D000003 ORTHO05D000167 7.1e-07 57.8 94 31.9
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-07 57.8 97 33.0
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-07 57.8 97 33.0
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-07 57.8 102 33.3
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-07 57.4 114 29.8
CANSAT80G2658 Cannabis sativa HOM05D000003 ORTHO05D000167 9.2e-07 57.4 101 33.7
Cfa019600 Carpinus fangiana HOM05D012052 ORTHO05D000167 9.2e-07 57.4 59 45.8
Haze_23484 Corylus avellana HOM05D062968 ORTHO05D016203 9.2e-07 57.4 97 37.1
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 9.2e-07 57.4 105 33.3
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 9.2e-07 57.4 98 31.6
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 57.0 123 30.1
Haze_05932 Corylus avellana HOM05D009031 ORTHO05D000167 1.2e-06 57.0 115 32.2
TWI77G0377 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.2e-06 57.0 96 35.4
TWI77G0924 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.2e-06 57.0 96 35.4
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 109 31.2
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 56.6 96 33.3
Cfa006225 Carpinus fangiana HOM05D009031 ORTHO05D000167 1.6e-06 56.6 95 33.7
Haze_18357 Corylus avellana HOM05D025031 ORTHO05D000167 1.6e-06 56.6 92 33.7
Duzib027G0001 Durio zibethinus HOM05D000003 ORTHO05D000167 1.6e-06 56.6 94 31.9
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 56.6 105 31.4
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-06 56.6 105 31.4
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 83 36.1
SHI39371 Sapria himalayana HOM05D000003 ORTHO05D000167 2.1e-06 56.2 89 36.0
QL08p037725 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-06 55.8 87 29.9
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-06 55.5 105 35.2
COL.COLO4_06144 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.6e-06 55.1 94 33.0
Haze_18798 Corylus avellana HOM05D009031 ORTHO05D000167 4.6e-06 55.1 58 44.8
FAN28G2422 Fragaria x ananassa HOM05D000003 ORTHO05D011454 4.6e-06 55.1 117 29.9
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-06 55.1 105 30.5
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-06 55.1 101 34.7
CANSAT25G0663 Cannabis sativa HOM05D000003 ORTHO05D000167 6.0e-06 54.7 82 37.8
Duzib187G0809 Durio zibethinus HOM05D000003 ORTHO05D000167 6.0e-06 54.7 87 37.9
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 6.0e-06 54.7 90 34.4
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.0e-06 54.7 121 27.3
CANSAT56G0621 Cannabis sativa HOM05D000003 ORTHO05D000167 7.8e-06 54.3 112 32.1
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 7.8e-06 54.3 91 35.2
Haze_05397 Corylus avellana HOM05D000003 ORTHO05D000167 7.8e-06 54.3 80 32.5
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 7.8e-06 54.3 103 31.1
FvH4_5g38981 Fragaria vesca HOM05D000003 ORTHO05D011454 7.8e-06 54.3 88 33.0


User provided reference genes

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