Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16049 Corylus avellana HOM05D000480 ORTHO05D000313 5.3e-130 467.6 225 100.0
Haze_16057 Corylus avellana HOM05D000480 ORTHO05D000313 7.2e-34 148.3 93 78.5
Haze_16051 Corylus avellana HOM05D000480 ORTHO05D000313 2.1e-25 120.2 125 51.2
Haze_16050 Corylus avellana HOM05D000480 ORTHO05D000313 1.8e-21 107.1 104 56.7
Haze_16058 Corylus avellana HOM05D000480 ORTHO05D000313 2.7e-17 93.2 71 71.8
Haze_08207 Corylus avellana HOM05D000480 ORTHO05D000313 4.7e-17 92.4 174 32.8
CANSAT21G1221 Cannabis sativa HOM05D000480 ORTHO05D000313 8.2e-14 81.6 219 27.9
Cfa012289 Carpinus fangiana HOM05D000480 ORTHO05D000313 8.2e-14 81.6 196 32.1
Cfa012608 Carpinus fangiana HOM05D000480 ORTHO05D000313 9.1e-13 78.2 200 30.0
Haze_08397 Corylus avellana HOM05D000480 ORTHO05D000313 7.7e-12 75.1 198 29.3
Haze_08208 Corylus avellana HOM05D000480 ORTHO05D000313 2.9e-11 73.2 208 26.0
QL04p002118 Quercus lobata HOM05D000480 ORTHO05D000313 2.9e-11 73.2 196 30.6
QL04p000599 Quercus lobata HOM05D000480 ORTHO05D000313 1.1e-10 71.2 196 30.1
Haze_08396 Corylus avellana HOM05D000480 ORTHO05D000313 1.9e-10 70.5 161 31.7
QL04p000546 Quercus lobata HOM05D000480 ORTHO05D000313 3.2e-10 69.7 200 28.0
Cfa019329 Carpinus fangiana HOM05D000480 ORTHO05D000313 4.2e-10 69.3 68 47.1
Haze_08200 Corylus avellana HOM05D000480 ORTHO05D000313 4.2e-10 69.3 145 31.7
Cfa012322 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.6e-09 67.4 68 48.5
Cfa012609 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.6e-09 67.4 202 29.2
Haze_08390 Corylus avellana HOM05D000480 ORTHO05D000313 2.1e-09 67.0 88 42.0
Rhsim08G0165400 Rhododendron simsii HOM05D000480 ORTHO05D000313 6.1e-09 65.5 87 39.1
Haze_08377 Corylus avellana HOM05D000480 ORTHO05D000313 1.8e-08 63.9 68 44.1
Rhsim08G0165600 Rhododendron simsii HOM05D000480 ORTHO05D000313 1.8e-08 63.9 88 37.5
Haze_08206 Corylus avellana HOM05D000732 ORTHO05D001037 2.3e-08 63.5 97 37.1
CiPaw.11G073500 Carya illinoinensis HOM05D000480 ORTHO05D000313 3.0e-08 63.2 62 48.4
Ciclev10023835m.g Citrus clementina HOM05D000480 ORTHO05D000313 3.0e-08 63.2 87 36.8
CiPaw.11G073600 Carya illinoinensis HOM05D000480 ORTHO05D000313 6.7e-08 62.0 75 41.3
Cfa006390 Carpinus fangiana HOM05D000480 ORTHO05D000313 8.8e-08 61.6 68 45.6
RcHm_v2.0_Chr7g0205421 Rosa chinensis HOM05D000480 ORTHO05D000313 8.8e-08 61.6 207 28.0
Haze_08379 Corylus avellana HOM05D000480 ORTHO05D000313 1.1e-07 61.2 62 46.8
Rhsim08G0164800 Rhododendron simsii HOM05D000480 ORTHO05D000313 2.0e-07 60.5 61 50.8
Haze_08415 Corylus avellana HOM05D000480 ORTHO05D000313 2.6e-07 60.1 68 42.6
Ciclev10019837m.g Citrus clementina HOM05D000480 ORTHO05D000313 3.3e-07 59.7 91 33.0
Ciclev10024088m.g Citrus clementina HOM05D000480 ORTHO05D000313 3.3e-07 59.7 68 42.6
DCAR_030898 Daucus carota HOM05D000480 ORTHO05D000313 3.3e-07 59.7 68 38.2
Ciclev10020060m.g Citrus clementina HOM05D000480 ORTHO05D000313 4.4e-07 59.3 68 41.2
Cfa012316 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.7e-07 58.9 65 43.1
Cfa021235 Carpinus fangiana HOM05D000480 ORTHO05D000313 5.7e-07 58.9 62 41.9
Rhsim08G0166500 Rhododendron simsii HOM05D000480 ORTHO05D000313 5.7e-07 58.9 77 39.0
Cfa012461 Carpinus fangiana HOM05D000480 ORTHO05D000313 7.5e-07 58.5 65 41.5
Ciclev10019208m.g Citrus clementina HOM05D000480 ORTHO05D000313 7.5e-07 58.5 195 28.7
Medtr8g072510 Medicago truncatula HOM05D000480 ORTHO05D000313 7.5e-07 58.5 83 36.1
arahy.Tifrunner.gnm1.ann1.U4K0HX Arachis hypogaea HOM05D000480 ORTHO05D000313 9.7e-07 58.2 112 27.7
Cfa004479 Carpinus fangiana HOM05D000480 ORTHO05D000313 9.7e-07 58.2 192 29.2
Ciclev10019454m.g Citrus clementina HOM05D000480 ORTHO05D000313 9.7e-07 58.2 61 45.9
Ciclev10020490m.g Citrus clementina HOM05D000480 ORTHO05D000313 9.7e-07 58.2 61 45.9
Cfa010028 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.3e-06 57.8 62 45.2
Cfa010311 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.3e-06 57.8 79 40.5
Ca_22756_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 1.3e-06 57.8 73 37.0
Ciclev10024144m.g Citrus clementina HOM05D000480 ORTHO05D000313 1.3e-06 57.8 65 41.5
Actinidia14393 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.7e-06 57.4 73 38.4
Cfa012310 Carpinus fangiana HOM05D000480 ORTHO05D000313 1.7e-06 57.4 62 43.5
Haze_08392 Corylus avellana HOM05D000480 ORTHO05D000313 1.7e-06 57.4 68 41.2
Glyma.06G237432 Glycine max HOM05D000480 ORTHO05D000313 1.7e-06 57.4 75 38.7
CANSAT21G1361 Cannabis sativa HOM05D000480 ORTHO05D000313 2.2e-06 57.0 68 41.2
Cfa012317 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.2e-06 57.0 49 49.0
Haze_08374 Corylus avellana HOM05D000480 ORTHO05D000313 2.2e-06 57.0 68 39.7
Haze_08398 Corylus avellana HOM05D000480 ORTHO05D000313 2.2e-06 57.0 203 27.6
BcaB01g05046 Brassica carinata HOM05D000480 ORTHO05D000313 2.8e-06 56.6 71 39.4
Cfa021307 Carpinus fangiana HOM05D000480 ORTHO05D000313 2.8e-06 56.6 52 50.0
Haze_08419 Corylus avellana HOM05D000480 ORTHO05D000313 2.8e-06 56.6 62 41.9
Actinidia20128 Actinidia chinensis HOM05D000480 ORTHO05D000313 3.7e-06 56.2 63 41.3
arahy.Tifrunner.gnm1.ann1.W8NE4R Arachis hypogaea HOM05D000480 ORTHO05D000313 3.7e-06 56.2 70 42.9
Cfa012319 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.7e-06 56.2 68 38.2
Cfa019325 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.7e-06 56.2 62 43.5
Haze_08404 Corylus avellana HOM05D000480 ORTHO05D000313 3.7e-06 56.2 62 45.2
Gohir.A10G213300 Gossypium hirsutum HOM05D000480 ORTHO05D000313 3.7e-06 56.2 68 36.8
Sp6g28600 Schrenkiella parvula HOM05D000480 ORTHO05D000313 3.7e-06 56.2 71 39.4
Cfa012321 Carpinus fangiana HOM05D000480 ORTHO05D000313 4.8e-06 55.8 65 41.5
Ca_26582_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 4.8e-06 55.8 88 36.4
Haze_08376 Corylus avellana HOM05D000480 ORTHO05D000313 4.8e-06 55.8 91 37.4
Haze_08407 Corylus avellana HOM05D000480 ORTHO05D000313 4.8e-06 55.8 62 45.2
Haze_08408 Corylus avellana HOM05D000480 ORTHO05D000313 4.8e-06 55.8 62 45.2
Dinv25127 Davidia involucrata HOM05D000480 ORTHO05D000313 4.8e-06 55.8 68 39.7
Duzib205G1201 Durio zibethinus HOM05D000480 ORTHO05D000313 4.8e-06 55.8 71 39.4
Thhalv10013476m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 4.8e-06 55.8 71 38.0
Medtr8g073260 Medicago truncatula HOM05D000480 ORTHO05D000313 4.8e-06 55.8 73 38.4
Psat4g105000 Pisum sativum HOM05D000480 ORTHO05D000313 4.8e-06 55.8 74 36.5
BcaC07g41569 Brassica carinata HOM05D000480 ORTHO05D000313 6.3e-06 55.5 192 26.0
A03p07190 Brassica napus HOM05D000480 ORTHO05D000313 6.3e-06 55.5 71 38.0
BraA03t10041Z Brassica rapa HOM05D000480 ORTHO05D000313 6.3e-06 55.5 71 38.0
Medtr8g039620 Medicago truncatula HOM05D000480 ORTHO05D000313 6.3e-06 55.5 73 38.4
arahy.Tifrunner.gnm1.ann1.U8895U Arachis hypogaea HOM05D000082 ORTHO05D001639 8.2e-06 55.1 103 31.1
C03p08180 Brassica napus HOM05D000480 ORTHO05D000313 8.2e-06 55.1 71 38.0
BolC3t13315H Brassica oleracea HOM05D000480 ORTHO05D000313 8.2e-06 55.1 71 38.0
TPR.G13724 Trifolium pratense HOM05D000480 ORTHO05D000313 8.2e-06 55.1 79 35.4
TPR.G17846 Trifolium pratense HOM05D000480 ORTHO05D000313 8.2e-06 55.1 83 34.9


User provided reference genes

Program Settings