Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 5.5e-189 664.1 322 100.0
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 1.5e-69 267.3 163 80.4
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 1.3e-65 254.2 166 75.3
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 1.4e-46 191.0 165 57.6
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 5.8e-45 185.7 132 67.4
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 1.9e-40 170.6 143 61.5
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 4.3e-40 169.5 153 55.6
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 5.6e-40 169.1 176 50.6
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 7.6e-37 158.7 176 49.4
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.3e-36 157.9 121 62.8
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 2.2e-36 157.1 132 58.3
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 2.9e-36 156.8 124 59.7
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 4.9e-36 156.0 137 57.7
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 1.9e-35 154.1 122 59.8
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 5.4e-35 152.5 127 57.5
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 5.4e-35 152.5 155 54.2
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.6e-34 151.0 127 57.5
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 3.5e-34 149.8 122 61.5
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 6.0e-34 149.1 120 60.0
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 1.0e-33 148.3 125 56.8
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 1.3e-33 147.9 146 49.3
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 1.7e-33 147.5 122 60.7
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 5.1e-33 146.0 157 49.7
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 1.9e-32 144.1 127 56.7
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 3.3e-32 143.3 140 53.6
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.6e-31 141.0 132 52.3
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 8.1e-31 138.7 187 41.2
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 1.1e-30 138.3 121 57.0
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 1.1e-30 138.3 128 53.9
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 1.4e-30 137.9 130 48.5
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.1e-30 136.7 127 54.3
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 5.3e-30 136.0 131 55.0
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.2e-29 134.8 129 50.4
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 1.2e-29 134.8 141 49.6
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 2.0e-29 134.0 129 50.4
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.0e-29 134.0 127 52.8
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.6e-29 133.7 104 66.3
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 4.5e-29 132.9 133 51.1
Haze_14964 Corylus avellana HOM05D000694 ORTHO05D000530 5.8e-29 132.5 130 60.8
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 5.8e-29 132.5 130 49.2
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 5.8e-29 132.5 161 44.7
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 7.6e-29 132.1 127 52.0
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 7.6e-29 132.1 127 52.0
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 9.9e-29 131.7 144 53.5
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 9.9e-29 131.7 129 49.6
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 1.7e-28 131.0 106 64.2
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 3.8e-28 129.8 174 42.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 1.1e-27 128.3 119 54.6
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 1.4e-27 127.9 130 49.2
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.4e-27 127.1 128 51.6
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 3.2e-27 126.7 148 41.9
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 4.2e-27 126.3 123 51.2
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 5.4e-27 125.9 119 50.4
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 1.8e-25 120.9 162 43.8
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 8.7e-25 118.6 164 42.1
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.8e-23 113.6 125 45.6
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 6.2e-23 112.5 151 43.0
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 3.1e-22 110.2 172 40.7
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.1e-19 101.7 125 42.4
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 2.7e-18 97.1 148 37.2
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 3.9e-17 93.2 149 40.3
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 9.6e-16 88.6 130 36.2
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 4.5e-13 79.7 76 52.6
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 2.1e-10 70.9 37 100.0


User provided reference genes

Program Settings