Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_15966 Corylus avellana HOM05D002205 ORTHO05D008905 1.7e-41 172.2 83 100.0
Haze_15964 Corylus avellana HOM05D002205 ORTHO05D008905 5.5e-40 167.2 80 100.0
CiPaw.01G224100 Carya illinoinensis HOM05D002205 ORTHO05D008905 9.7e-37 156.4 81 92.6
Dinv30371 Davidia involucrata HOM05D002205 ORTHO05D008905 2.2e-33 145.2 81 84.0
QL05p012040 Quercus lobata HOM05D002205 ORTHO05D008905 1.1e-32 142.9 81 86.4
Prupe.3G048500 Prunus persica HOM05D002205 ORTHO05D008905 7.9e-31 136.7 81 76.5
CANSAT56G3898 Cannabis sativa HOM05D002205 ORTHO05D008905 1.8e-30 135.6 81 79.0
Nn8g38823 Nelumbo nucifera HOM05D002205 ORTHO05D008905 1.8e-30 135.6 81 77.8
arahy.Tifrunner.gnm1.ann1.0N86HX Arachis hypogaea HOM05D002205 ORTHO05D008905 3.0e-30 134.8 80 77.5
arahy.Tifrunner.gnm1.ann1.7K23LZ Arachis hypogaea HOM05D002205 ORTHO05D008905 3.0e-30 134.8 80 77.5
MSTRG.22575 Avicennia marina HOM05D002205 ORTHO05D008905 3.0e-30 134.8 80 78.8
vmacro18779 Vaccinium macrocarpon HOM05D002205 ORTHO05D008905 3.0e-30 134.8 74 83.8
Atru.chr1.3735 Acer truncatum HOM05D002205 ORTHO05D008905 3.9e-30 134.4 80 77.5
Ciclev10025974m.g Citrus clementina HOM05D002205 ORTHO05D008905 3.9e-30 134.4 79 81.0
Migut.I01033 Erythranthe guttata HOM05D002205 ORTHO05D008905 5.1e-30 134.0 80 77.5
Duzib235G0548 Durio zibethinus HOM05D002205 ORTHO05D008905 1.1e-29 132.9 74 81.1
RcHm_v2.0_Chr2g0143471 Rosa chinensis HOM05D002205 ORTHO05D008905 1.1e-29 132.9 80 77.5
TAR624G0974 Trochodendron aralioides HOM05D002205 ORTHO05D008905 1.1e-29 132.9 81 76.5
Rhsim08G0234400 Rhododendron simsii HOM05D002205 ORTHO05D008905 1.5e-29 132.5 81 75.3
Lj5A43G71 Lonicera japonica HOM05D002205 ORTHO05D008905 2.0e-29 132.1 79 77.2
Lalb_Chr01g0013431 Lupinus albus HOM05D002205 ORTHO05D008905 2.0e-29 132.1 80 76.2
Cc04_g01860 Coffea canephora HOM05D002205 ORTHO05D008905 3.3e-29 131.3 79 73.4
SGA_v2.0_scaffold122G33371 Striga asiatica HOM05D002205 ORTHO05D008905 3.3e-29 131.3 68 86.8
COL.COLO4_30666 Corchorus olitorius HOM05D002205 ORTHO05D008905 4.4e-29 131.0 78 76.9
GSVIVG01016868001 Vitis vinifera HOM05D002205 ORTHO05D008905 4.4e-29 131.0 81 76.5
CSS0010002 Camellia sinensis var. sinensis HOM05D002205 ORTHO05D008905 7.4e-29 130.2 80 77.5
HanXRQChr09g0276551 Helianthus annuus HOM05D002205 ORTHO05D008905 7.4e-29 130.2 74 79.7
TWI79G0068 Tripterygium wilfordii HOM05D002205 ORTHO05D008905 7.4e-29 130.2 74 81.1
Actinidia21768 Actinidia chinensis HOM05D002205 ORTHO05D008905 1.3e-28 129.4 81 74.1
MD09G1192200 Malus domestica HOM05D002205 ORTHO05D008905 1.7e-28 129.0 82 73.2
Nitab4.5_0012068g0010 Nicotiana tabacum HOM05D002205 ORTHO05D008905 1.7e-28 129.0 74 79.7
Nitab4.5_0001295g0270 Nicotiana tabacum HOM05D002205 ORTHO05D008905 2.8e-28 128.3 80 72.5
Peaxi162Scf00038g00169 Petunia axillaris HOM05D002205 ORTHO05D008905 3.7e-28 127.9 83 73.5
ECA232G1049 Erigeron canadensis HOM05D002205 ORTHO05D008905 4.8e-28 127.5 74 81.1
BcaC01g03974 Brassica carinata HOM05D002205 ORTHO05D008905 6.3e-28 127.1 80 73.8
C03p46600 Brassica napus HOM05D002205 ORTHO05D008905 6.3e-28 127.1 80 73.8
BolC3t16923H Brassica oleracea HOM05D002205 ORTHO05D008905 6.3e-28 127.1 80 73.8
THA.LOC104815641 Tarenaya hassleriana HOM05D002205 ORTHO05D008905 6.3e-28 127.1 79 74.7
CAN.G1389.29 Capsicum annuum HOM05D002205 ORTHO05D008905 8.2e-28 126.7 80 73.8
FAN09G2611 Fragaria x ananassa HOM05D002205 ORTHO05D008905 1.1e-27 126.3 80 73.8
Solyc03g121670.4 Solanum lycopersicum HOM05D002205 ORTHO05D008905 1.1e-27 126.3 80 73.8
PGSC0003DMG400002494 Solanum tuberosum HOM05D002205 ORTHO05D008905 1.1e-27 126.3 80 73.8
Aqoxy7G04021 Aquilegia oxysepala HOM05D002205 ORTHO05D008905 1.4e-27 125.9 73 80.8
A03p38420 Brassica napus HOM05D002205 ORTHO05D008905 1.4e-27 125.9 70 81.4
BraA03t12994Z Brassica rapa HOM05D002205 ORTHO05D008905 1.4e-27 125.9 70 81.4
Hma1.2p1_0388F.1_g142440 Hydrangea macrophylla HOM05D002205 ORTHO05D008905 1.4e-27 125.9 81 75.3
Hma1.2p1_2617F.1_g325510 Hydrangea macrophylla HOM05D002205 ORTHO05D008905 1.4e-27 125.9 81 75.3
Sp3g12030 Schrenkiella parvula HOM05D002205 ORTHO05D008905 1.4e-27 125.9 79 73.4
BcaB04g18799 Brassica carinata HOM05D002205 ORTHO05D008905 3.1e-27 124.8 70 80.0
FvH4_6g33560 Fragaria vesca HOM05D002205 ORTHO05D008905 4.1e-27 124.4 75 74.7
FAN02G0247 Fragaria x ananassa HOM05D002205 ORTHO05D008905 4.1e-27 124.4 80 72.5
FAN14G0293 Fragaria x ananassa HOM05D002205 ORTHO05D008905 4.1e-27 124.4 75 74.7
Psat4g188120 Pisum sativum HOM05D002205 ORTHO05D008905 4.1e-27 124.4 80 70.0
Sopen03g040480 Solanum pennellii HOM05D002205 ORTHO05D008905 4.1e-27 124.4 80 72.5
MBI01_g20336_MAGBIO Magnolia biondii HOM05D002205 ORTHO05D008905 7.0e-27 123.6 81 74.1
Carub.0003s1335 Capsella rubella HOM05D002205 ORTHO05D008905 9.1e-27 123.2 81 74.1
CARHR088570 Cardamine hirsuta HOM05D002205 ORTHO05D008905 9.1e-27 123.2 68 80.9
Thhalv10021012m.g Eutrema salsugineum HOM05D002205 ORTHO05D008905 9.1e-27 123.2 75 74.7
MD17G1186100 Malus domestica HOM05D002205 ORTHO05D008905 1.2e-26 122.9 82 70.7
Sed0015267 Sechium edule HOM05D002205 ORTHO05D008905 1.2e-26 122.9 80 71.2
Cpa.g.sc25.47 Carica papaya HOM05D002205 ORTHO05D008905 1.6e-26 122.5 75 77.3
SalBow6G3596 Salvia bowleyana HOM05D002205 ORTHO05D008905 2.0e-26 122.1 68 80.9
SalBow6G5784 Salvia bowleyana HOM05D002205 ORTHO05D008905 2.0e-26 122.1 68 80.9
Aa31LG8G990 Aethionema arabicum HOM05D002205 ORTHO05D008905 2.6e-26 121.7 70 78.6
FAN05G0593 Fragaria x ananassa HOM05D002205 ORTHO05D008905 2.6e-26 121.7 81 70.4
Sabra03G0023600 Salix brachista HOM05D001215 ORTHO05D003146 3.5e-26 121.3 80 72.5
AT3G13800 Arabidopsis thaliana HOM05D002205 ORTHO05D008905 4.5e-26 120.9 81 70.4
Eucgr.F03136 Eucalyptus grandis HOM05D002205 ORTHO05D008905 4.5e-26 120.9 81 71.6
Gohir.A10G058900 Gossypium hirsutum HOM05D002205 ORTHO05D008905 4.5e-26 120.9 72 77.8
Gorai.011G064800 Gossypium raimondii HOM05D002205 ORTHO05D008905 4.5e-26 120.9 72 77.8
PSO210G6809 Papaver somniferum HOM05D002205 ORTHO05D008905 1.0e-25 119.8 67 82.1
AL3G25940 Arabidopsis lyrata HOM05D002205 ORTHO05D008905 1.3e-25 119.4 79 72.2
Lsat_1_v5_gn_4_94401 Lactuca sativa HOM05D002205 ORTHO05D008905 1.3e-25 119.4 74 75.7
Gohir.D10G060500 Gossypium hirsutum HOM05D002205 ORTHO05D008905 2.2e-25 118.6 71 77.5
PGR031G3692 Punica granatum HOM05D002205 ORTHO05D008905 2.2e-25 118.6 68 80.9
VMungo0331G1241 Vigna mungo HOM05D002205 ORTHO05D008905 3.8e-25 117.9 76 75.0
CsaV3_3G043800 Cucumis sativus L. HOM05D002205 ORTHO05D008905 5.0e-25 117.5 80 70.0
MELO3C013096.2 Cucumis melo HOM05D002205 ORTHO05D008905 6.5e-25 117.1 80 70.0
Glyma.07G009000 Glycine max HOM05D002205 ORTHO05D008905 6.5e-25 117.1 74 77.0
Manes.04G140400 Manihot esculenta HOM05D002205 ORTHO05D008905 6.5e-25 117.1 82 69.5
Potri.003G036800 Populus trichocarpa HOM05D002205 ORTHO05D008905 6.5e-25 117.1 80 71.2
AUR62009832 Chenopodium quinoa HOM05D002205 ORTHO05D008905 8.5e-25 116.7 70 77.1
AUR62038144 Chenopodium quinoa HOM05D002205 ORTHO05D008905 8.5e-25 116.7 70 77.1
Lj3g0021915 Lotus japonicus HOM05D002205 ORTHO05D008905 8.5e-25 116.7 68 79.4
ATR0789G064 Amborella trichopoda HOM05D002205 ORTHO05D008905 2.5e-24 115.2 72 73.6
Glyma.08G192200 Glycine max HOM05D002205 ORTHO05D008905 2.5e-24 115.2 74 75.7
Phvul.010G138100 Phaseolus vulgaris HOM05D002205 ORTHO05D008905 3.2e-24 114.8 82 68.3
Medtr8g017270 Medicago truncatula HOM05D002205 ORTHO05D008905 4.2e-24 114.4 80 63.8
Os09g0363800 Oryza sativa ssp. japonica HOM05D002205 ORTHO05D008905 7.2e-24 113.6 67 77.6
HPP92_009142 Vanilla planifolia HOM05D002205 ORTHO05D008905 2.1e-23 112.1 73 71.2
DCAR_016151 Daucus carota HOM05D002205 ORTHO05D008905 3.6e-23 111.3 67 76.1
Sc15g0000220 Simmondsia chinensis HOM05D002205 ORTHO05D008905 3.6e-23 111.3 67 74.6
Zm00001eb311000 Zea mays HOM05D002205 ORTHO05D008905 6.1e-23 110.5 80 66.2
EL10Ac4g09462 Beta vulgaris HOM05D002205 ORTHO05D008905 1.0e-22 109.8 70 72.9
arahy.Tifrunner.gnm1.ann1.Z9C7LK Arachis hypogaea HOM05D002205 ORTHO05D008905 6.7e-22 107.1 75 69.3
Hund18709 Selenicereus undatus HOM05D002205 ORTHO05D008905 1.1e-21 106.3 68 69.1
SEGI_33002 Sequoiadendron giganteum HOM05D002205 ORTHO05D008905 1.1e-21 106.3 66 72.7
ClCG07G013800 Citrullus lanatus HOM05D002205 ORTHO05D008905 5.7e-21 104.0 61 77.0
Manes.11G025500 Manihot esculenta HOM05D002205 ORTHO05D008905 5.7e-21 104.0 61 78.7
TPR.G19298 Trifolium pratense HOM05D002205 ORTHO05D008905 2.2e-20 102.1 65 69.2
Pp3c2_540 Physcomitrium patens HOM05D002205 ORTHO05D008905 2.8e-20 101.7 79 67.1
SMO364G0714 Selaginella moellendorffii HOM05D002205 ORTHO05D008905 4.8e-20 100.9 66 71.2
AagrBONN_evm.TU.Sc2ySwM_228.3237 Anthoceros agrestis HOM05D002205 ORTHO05D008905 6.3e-20 100.5 67 73.1
Mapoly0019s0105 Marchantia polymorpha HOM05D002205 ORTHO05D008905 5.0e-17 90.9 67 68.7
SalBow1G1864 Salvia bowleyana HOM05D002205 ORTHO05D002629 8.5e-09 63.5 38 76.3
SalBow1G5538 Salvia bowleyana HOM05D002205 ORTHO05D002629 8.5e-09 63.5 38 76.3
Sed0018770 Sechium edule HOM05D002205 ORTHO05D004847 1.9e-08 62.4 89 44.9
ClCG03G006500 Citrullus lanatus HOM05D002205 ORTHO05D004847 3.2e-08 61.6 87 42.5
unitig_0.g2875 Utricularia gibba HOM05D002205 ORTHO05D008905 4.2e-08 61.2 45 62.2
TPR.G26265 Trifolium pratense HOM05D002205 ORTHO05D004847 9.4e-08 60.1 75 48.0
MELO3C002770.2 Cucumis melo HOM05D002205 ORTHO05D004847 1.2e-07 59.7 87 42.5
FvH4_3g05040 Fragaria vesca HOM05D002205 ORTHO05D004847 1.2e-07 59.7 79 44.3
Dinv21519 Davidia involucrata HOM05D002205 ORTHO05D004847 1.6e-07 59.3 87 47.1
CsaV3_1G036870 Cucumis sativus L. HOM05D002205 ORTHO05D004847 2.1e-07 58.9 87 42.5
FAN25G1086 Fragaria x ananassa HOM05D002205 ORTHO05D004847 2.1e-07 58.9 73 46.6
Gohir.D06G203600 Gossypium hirsutum HOM05D002205 ORTHO05D004847 2.7e-07 58.5 89 42.7
Gorai.010G237500 Gossypium raimondii HOM05D002205 ORTHO05D004847 2.7e-07 58.5 89 42.7
Lj6g0014068 Lotus japonicus HOM05D002205 ORTHO05D004847 2.7e-07 58.5 75 46.7
Prupe.4G085600 Prunus persica HOM05D002205 ORTHO05D004847 2.7e-07 58.5 71 46.5
Duzib192G0694 Durio zibethinus HOM05D002205 ORTHO05D004847 3.6e-07 58.2 94 41.5
Gohir.A06G196100 Gossypium hirsutum HOM05D002205 ORTHO05D004847 3.6e-07 58.2 89 42.7
vmacro03432 Vaccinium macrocarpon HOM05D002205 ORTHO05D004847 3.6e-07 58.2 87 44.8
Actinidia09937 Actinidia chinensis HOM05D002205 ORTHO05D004847 4.7e-07 57.8 87 47.1
FAN16G1117 Fragaria x ananassa HOM05D002205 ORTHO05D004847 4.7e-07 57.8 73 45.2
FAN21G0057 Fragaria x ananassa HOM05D002205 ORTHO05D004847 4.7e-07 57.8 73 45.2
Cfa000899 Carpinus fangiana HOM05D002205 ORTHO05D004847 6.1e-07 57.4 71 49.3
FAN11G0257 Fragaria x ananassa HOM05D002205 ORTHO05D004847 6.1e-07 57.4 73 46.6
EL10As2g23264 Beta vulgaris HOM05D002205 ORTHO05D004847 8.0e-07 57.0 73 47.9
Lalb_Chr15g0086621 Lupinus albus HOM05D002205 ORTHO05D004847 8.0e-07 57.0 72 48.6
Medtr2g018660 Medicago truncatula HOM05D002205 ORTHO05D004847 8.0e-07 57.0 75 46.7
RcHm_v2.0_Chr5g0014931 Rosa chinensis HOM05D002205 ORTHO05D004847 8.0e-07 57.0 74 45.9
TPR.G29295 Trifolium pratense HOM05D002205 ORTHO05D008905 8.0e-07 57.0 30 76.7
Actinidia13441 Actinidia chinensis HOM05D002205 ORTHO05D004847 1.0e-06 56.6 87 43.7
Ca_00510_v3 Cicer arietinum L. HOM05D002205 ORTHO05D004847 1.0e-06 56.6 72 50.0
Mapoly0054s0026 Marchantia polymorpha HOM05D002205 ORTHO05D004847 1.0e-06 56.6 71 49.3
PGR083G2813 Punica granatum HOM05D002205 ORTHO05D004847 1.0e-06 56.6 71 47.9
Cc00_g02010 Coffea canephora HOM05D002205 ORTHO05D004847 1.4e-06 56.2 72 48.6
Gohir.D06G144600 Gossypium hirsutum HOM05D002205 ORTHO05D004847 1.4e-06 56.2 73 46.6
Gorai.010G168300 Gossypium raimondii HOM05D002205 ORTHO05D004847 1.4e-06 56.2 73 46.6
MD05G1279500 Malus domestica HOM05D002205 ORTHO05D004847 1.4e-06 56.2 71 45.1
Sed0018506 Sechium edule HOM05D002205 ORTHO05D004847 1.4e-06 56.2 71 52.1
SMO118G0510 Selaginella moellendorffii HOM05D002205 ORTHO05D004847 1.4e-06 56.2 82 43.9
SEGI_24320 Sequoiadendron giganteum HOM05D002205 ORTHO05D004847 1.4e-06 56.2 69 49.3
Sopen08g008680 Solanum pennellii HOM05D002205 ORTHO05D004847 1.4e-06 56.2 79 46.8
ATR1098G096 Amborella trichopoda HOM05D002205 ORTHO05D004847 1.8e-06 55.8 72 47.2
Psat1g192120 Pisum sativum HOM05D002205 ORTHO05D004847 1.8e-06 55.8 72 45.8
Solyc08g023500.4 Solanum lycopersicum HOM05D002205 ORTHO05D004847 1.8e-06 55.8 79 46.8
VMungo0251G0380 Vigna mungo HOM05D002205 ORTHO05D004847 1.8e-06 55.8 73 45.2
CBR_g36946 Chara braunii HOM05D002205 ORTHO05D131979 2.3e-06 55.5 42 64.3
MBI18_g11219_MAGBIO Magnolia biondii HOM05D002205 ORTHO05D004847 2.3e-06 55.5 74 47.3
Actinidia32153 Actinidia chinensis HOM05D002205 ORTHO05D008905 3.0e-06 55.1 34 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1912 Anthoceros agrestis HOM05D002205 ORTHO05D004847 3.0e-06 55.1 71 46.5
ECA234G0538 Erigeron canadensis HOM05D002205 ORTHO05D004847 3.0e-06 55.1 72 50.0
Nitab4.5_0000315g0040 Nicotiana tabacum HOM05D002205 ORTHO05D004847 3.0e-06 55.1 72 47.2
QL05p055095 Quercus lobata HOM05D002205 ORTHO05D004847 3.0e-06 55.1 73 49.3
Thecc.06G144400 Theobroma cacao HOM05D002205 ORTHO05D004847 3.0e-06 55.1 73 46.6
TAR627G0288 Trochodendron aralioides HOM05D002205 ORTHO05D004847 3.0e-06 55.1 72 47.2
Ah.14g086280 Amaranthus hybridus HOM05D002205 ORTHO05D004847 4.0e-06 54.7 83 44.6
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 4.0e-06 54.7 87 39.1
Os03g0643250 Oryza sativa ssp. japonica HOM05D002205 ORTHO05D004847 6.8e-06 53.9 71 46.5
TWI73G0911 Tripterygium wilfordii HOM05D002205 ORTHO05D004847 6.8e-06 53.9 74 45.9
Migut.M00880 Erythranthe guttata HOM05D002205 ORTHO05D004847 8.8e-06 53.5 72 45.8
Manes.01G173000 Manihot esculenta HOM05D002205 ORTHO05D004847 8.8e-06 53.5 72 47.2


User provided reference genes

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